Literature DB >> 31182840

Palaeogenomic insights into the origins of French grapevine diversity.

Jazmín Ramos-Madrigal1, Anne Kathrine Wiborg Runge1,2, Laurent Bouby3, Thierry Lacombe4, José Alfredo Samaniego Castruita1, Anne-Françoise Adam-Blondon5, Isabel Figueiral6, Charlotte Hallavant7, José M Martínez-Zapater8, Caroline Schaal9, Reinhard Töpfer10, Bent Petersen1,11, Thomas Sicheritz-Pontén1,11, Patrice This4, Roberto Bacilieri4, M Thomas P Gilbert12,13, Nathan Wales14,15,16,17.   

Abstract

The Eurasian grapevine (Vitis vinifera) has long been important for wine production as well as being a food source. Despite being clonally propagated, modern cultivars exhibit great morphological and genetic diversity, with thousands of varieties described in historic and contemporaneous records. Through historical accounts, some varieties can be traced to the Middle Ages, but the genetic relationships between ancient and modern vines remain unknown. We present target-enriched genome-wide sequencing data from 28 archaeological grape seeds dating to the Iron Age, Roman era and medieval period. When compared with domesticated and wild accessions, we found that the archaeological samples were closely related to western European cultivars used for winemaking today. We identified seeds with identical genetic signatures present at different Roman sites, as well as seeds sharing parent-offspring relationships with varieties grown today. Furthermore, we discovered that one seed dated to ~1100 CE was a genetic match to 'Savagnin Blanc', providing evidence for 900 years of uninterrupted vegetative propagation.

Entities:  

Mesh:

Year:  2019        PMID: 31182840     DOI: 10.1038/s41477-019-0437-5

Source DB:  PubMed          Journal:  Nat Plants        ISSN: 2055-0278            Impact factor:   15.793


  23 in total

1.  Brassica and Sinapis Seeds in Medieval Archaeological Sites: An Example of Multiproxy Analysis for Their Identification and Ethnobotanical Interpretation.

Authors:  Giovanna Bosi; Simona De Felice; Michael J Wilkinson; Joël Allainguillaume; Laura Arru; Juri Nascimbene; Fabrizio Buldrini
Journal:  Plants (Basel)       Date:  2022-08-12

2.  Extent of wild-to-crop interspecific introgression in grapevine (Vitis vinifera) as a consequence of resistance breeding and implications for the crop species definition.

Authors:  Serena Foria; Gabriele Magris; Irena Jurman; Rachel Schwope; Massimo De Candido; Elisa De Luca; Dragoslav Ivanišević; Michele Morgante; Gabriele Di Gaspero
Journal:  Hortic Res       Date:  2022-01-18       Impact factor: 7.291

Review 3.  Back to the Origins: Background and Perspectives of Grapevine Domestication.

Authors:  Fabrizio Grassi; Gabriella De Lorenzis
Journal:  Int J Mol Sci       Date:  2021-04-26       Impact factor: 5.923

4.  The genomes of ancient date palms germinated from 2,000 y old seeds.

Authors:  Muriel Gros-Balthazard; Jonathan M Flowers; Khaled M Hazzouri; Sylvie Ferrand; Frédérique Aberlenc; Sarah Sallon; Michael D Purugganan
Journal:  Proc Natl Acad Sci U S A       Date:  2021-05-11       Impact factor: 11.205

5.  SOMmelier-Intuitive Visualization of the Topology of Grapevine Genome Landscapes Using Artificial Neural Networks.

Authors:  Maria Nikoghosyan; Maria Schmidt; Kristina Margaryan; Henry Loeffler-Wirth; Arsen Arakelyan; Hans Binder
Journal:  Genes (Basel)       Date:  2020-07-17       Impact factor: 4.096

6.  Accurate classification of fresh and charred grape seeds to the varietal level, using machine learning based classification method.

Authors:  Vlad Landa; Yekaterina Shapira; Michal David; Avshalom Karasik; Ehud Weiss; Yuval Reuveni; Elyashiv Drori
Journal:  Sci Rep       Date:  2021-06-30       Impact factor: 4.379

7.  Genetic Relationships Among Portuguese Cultivated and Wild Vitis vinifera L. Germplasm.

Authors:  Jorge Cunha; Javier Ibáñez; Margarida Teixeira-Santos; João Brazão; Pedro Fevereiro; José M Martínez-Zapater; José E Eiras-Dias
Journal:  Front Plant Sci       Date:  2020-03-05       Impact factor: 5.753

8.  Eco-evo-devo implications and archaeobiological perspectives of trait covariance in fruits of wild and domesticated grapevines.

Authors:  Vincent Bonhomme; Sandrine Picq; Sarah Ivorra; Allowen Evin; Thierry Pastor; Roberto Bacilieri; Thierry Lacombe; Isabel Figueiral; Jean-Frédéric Terral; Laurent Bouby
Journal:  PLoS One       Date:  2020-11-06       Impact factor: 3.240

9.  Portuguese wild grapevine genome re-sequencing (Vitis vinifera sylvestris).

Authors:  Miguel J N Ramos; João L Coito; David Faísca-Silva; Jorge Cunha; M Manuela R Costa; Sara Amâncio; Margarida Rocheta
Journal:  Sci Rep       Date:  2020-11-04       Impact factor: 4.379

10.  DNA-based genealogy reconstruction of Nebbiolo, Barbera and other ancient grapevine cultivars from northwestern Italy.

Authors:  Stefano Raimondi; Giorgio Tumino; Paola Ruffa; Paolo Boccacci; Giorgio Gambino; Anna Schneider
Journal:  Sci Rep       Date:  2020-09-25       Impact factor: 4.379

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