Literature DB >> 31182813

Global estimates of mammalian viral diversity accounting for host sharing.

Colin J Carlson1, Casey M Zipfel2, Romain Garnier2, Shweta Bansal2.   

Abstract

Present estimates suggest there are over 1 million virus species found in mammals alone, with about half a million posing a possible threat to human health. Although previous estimates assume linear scaling between host and virus diversity, we show that ecological network theory predicts a non-linear relationship, produced by patterns of host sharing among virus species. To account for host sharing, we fit a power law scaling relationship for host-virus species interaction networks. We estimate that there are about 40,000 virus species in mammals (including ~10,000 viruses with zoonotic potential), a reduction of two orders of magnitude from present projections of viral diversity. We expect that the increasing availability of host-virus association data will improve the precision of these estimates and their use in the sampling and surveillance of pathogens with pandemic potential. We suggest host sharing should be more widely included in macroecological approaches to estimating biodiversity.

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Year:  2019        PMID: 31182813     DOI: 10.1038/s41559-019-0910-6

Source DB:  PubMed          Journal:  Nat Ecol Evol        ISSN: 2397-334X            Impact factor:   15.460


  22 in total

1.  What would it take to describe the global diversity of parasites?

Authors:  Colin J Carlson; Tad A Dallas; Laura W Alexander; Alexandra L Phelan; Anna J Phillips
Journal:  Proc Biol Sci       Date:  2020-11-18       Impact factor: 5.349

Review 2.  Diversity and evolution of the animal virome.

Authors:  Erin Harvey; Edward C Holmes
Journal:  Nat Rev Microbiol       Date:  2022-01-04       Impact factor: 60.633

Review 3.  Zoonotic and reverse zoonotic transmission of viruses between humans and pigs.

Authors:  Helena Aagaard Glud; Sophie George; Kerstin Skovgaard; Lars Erik Larsen
Journal:  APMIS       Date:  2021-10-18       Impact factor: 3.428

Review 4.  The science of the host-virus network.

Authors:  Gregory F Albery; Daniel J Becker; Liam Brierley; Cara E Brook; Rebecca C Christofferson; Lily E Cohen; Tad A Dallas; Evan A Eskew; Anna Fagre; Maxwell J Farrell; Emma Glennon; Sarah Guth; Maxwell B Joseph; Nardus Mollentze; Benjamin A Neely; Timothée Poisot; Angela L Rasmussen; Sadie J Ryan; Stephanie Seifert; Anna R Sjodin; Erin M Sorrell; Colin J Carlson
Journal:  Nat Microbiol       Date:  2021-11-24       Impact factor: 30.964

5.  Climate change increases cross-species viral transmission risk.

Authors:  Colin J Carlson; Gregory F Albery; Cory Merow; Christopher H Trisos; Casey M Zipfel; Evan A Eskew; Kevin J Olival; Noam Ross; Shweta Bansal
Journal:  Nature       Date:  2022-04-28       Impact factor: 69.504

6.  From PREDICT to prevention, one pandemic later.

Authors:  Colin J Carlson
Journal:  Lancet Microbe       Date:  2020-04-01

7.  Predicting the global mammalian viral sharing network using phylogeography.

Authors:  Gregory F Albery; Evan A Eskew; Noam Ross; Kevin J Olival
Journal:  Nat Commun       Date:  2020-05-08       Impact factor: 14.919

8.  Divide-and-conquer: machine-learning integrates mammalian and viral traits with network features to predict virus-mammal associations.

Authors:  Maya Wardeh; Marcus S C Blagrove; Kieran J Sharkey; Matthew Baylis
Journal:  Nat Commun       Date:  2021-06-25       Impact factor: 14.919

9.  Testing predictability of disease outbreaks with a simple model of pathogen biogeography.

Authors:  Tad A Dallas; Colin J Carlson; Timothée Poisot
Journal:  R Soc Open Sci       Date:  2019-11-13       Impact factor: 2.963

10.  Emerging Zoonotic Diseases: Should We Rethink the Animal-Human Interface?

Authors:  Ioannis Magouras; Victoria J Brookes; Ferran Jori; Angela Martin; Dirk Udo Pfeiffer; Salome Dürr
Journal:  Front Vet Sci       Date:  2020-10-22
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