Literature DB >> 3118050

Species specificity of bacterial palindromic units.

E Gilson1, D Perrin, W Saurin, M Hofnung.   

Abstract

We described previously a family of dispersed palindromic sequences highly repeated in Escherichia coli and Salmonella typhimurium genomes. These sequences, called PU (palindromic units), are located outside structural genes. We report here observations suggesting that PU may have a role in bacterial speciation.

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Year:  1987        PMID： 3118050     DOI： 10.1007/bf02603122

Source DB:  PubMed          Journal:  J Mol Evol        ISSN： 0022-2844            Impact factor:   2.395


  25 in total

1.  Nucleotide sequence and biochemical characterization of the metJ gene from Salmonella typhimurium LT2.

Authors:  M L Urbanowski; G V Stauffer
Journal:  Nucleic Acids Res       Date:  1985-02-11       Impact factor: 16.971

2.  Matching relational patterns in nucleic acid sequences.

Authors:  W Saurin; P Marlière
Journal:  Comput Appl Biosci       Date:  1987-06

3.  Palindromic units from E. coli as binding sites for a chromoid-associated protein.

Authors:  E Gilson; D Perrin; J M Clement; S Szmelcman; E Dassa; M Hofnung
Journal:  FEBS Lett       Date:  1986-10-06       Impact factor: 4.124

4.  The nucleotide sequence of the gene for malF protein, an inner membrane component of the maltose transport system of Escherichia coli. Repeated DNA sequences are found in the malE-malF intercistronic region.

Authors:  S Froshauer; J Beckwith
Journal:  J Biol Chem       Date:  1984-09-10       Impact factor: 5.157

5.  The operon that encodes the sigma subunit of RNA polymerase also encodes ribosomal protein S21 and DNA primase in E. coli K12.

Authors:  Z F Burton; C A Gross; K K Watanabe; R R Burgess
Journal:  Cell       Date:  1983-02       Impact factor: 41.582

6.  The nucleotide sequence of the uvrD gene of E. coli.

Authors:  P W Finch; P T Emmerson
Journal:  Nucleic Acids Res       Date:  1984-07-25       Impact factor: 16.971

7.  Repetitive extragenic palindromic sequences: a major component of the bacterial genome.

Authors:  M J Stern; G F Ames; N H Smith; E C Robinson; C F Higgins
Journal:  Cell       Date:  1984-07       Impact factor: 41.582

8.  A novel intercistronic regulatory element of prokaryotic operons.

Authors:  C F Higgins; G F Ames; W M Barnes; J M Clement; M Hofnung
Journal:  Nature       Date:  1982-08-19       Impact factor: 49.962

9.  Two large clusters with thirty-seven transfer RNA genes adjacent to ribosomal RNA gene sets in Bacillus subtilis. Sequence and organization of trrnD and trrnE gene clusters.

Authors:  E F Wawrousek; N Narasimhan; J N Hansen
Journal:  J Biol Chem       Date:  1984-03-25       Impact factor: 5.157

10.  The nucleotide sequence of the nitrogen regulation gene ntrB and the glnA-ntrBC intergenic region of Klebsiella pneumoniae.

Authors:  S A MacFarlane; M Merrick
Journal:  Nucleic Acids Res       Date:  1985-11-11       Impact factor: 16.971
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  7 in total

1.  DNA polymerase I and a protein complex bind specifically to E. coli palindromic unit highly repetitive DNA: implications for bacterial chromosome organization.

Authors:  E Gilson; D Perrin; M Hofnung
Journal:  Nucleic Acids Res       Date:  1990-07-11       Impact factor: 16.971

2.  DNA gyrase binds to the family of prokaryotic repetitive extragenic palindromic sequences.

Authors:  Y Yang; G F Ames
Journal:  Proc Natl Acad Sci U S A       Date:  1988-12       Impact factor: 11.205

Review 3.  Organization of the bacterial chromosome.

Authors:  S Krawiec; M Riley
Journal:  Microbiol Rev       Date:  1990-12

4.  Genetic relationships among Mycobacterium leprae, Mycobacterium tuberculosis, and candidate leprosy vaccine strains determined by DNA hybridization: identification of an M. leprae-specific repetitive sequence.

Authors:  C M Grosskinsky; W R Jacobs; J E Clark-Curtiss; B R Bloom
Journal:  Infect Immun       Date:  1989-05       Impact factor: 3.441

5.  Tandem chromosomal duplications: role of REP sequences in the recombination event at the join-point.

Authors:  V Shyamala; E Schneider; G F Ames
Journal:  EMBO J       Date:  1990-03       Impact factor: 11.598

6.  Identification of VCR, a repeated sequence associated with a locus encoding a hemagglutinin in Vibrio cholerae O1.

Authors:  A Barker; C A Clark; P A Manning
Journal:  J Bacteriol       Date:  1994-09       Impact factor: 3.490

7.  Identification and characterization of repetitive extragenic palindromes (REP)-associated tyrosine transposases: implications for REP evolution and dynamics in bacterial genomes.

Authors:  Jaroslav Nunvar; Tereza Huckova; Irena Licha
Journal:  BMC Genomics       Date:  2010-01-19       Impact factor: 3.969
  7 in total

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