Literature DB >> 31180245

Bioinformatics Analysis of Stromal Molecular Signatures Associated with Breast and Prostate Cancer.

Chao Sun1, Yifan Gu1, Guoqing Chen1, Yibao Du1.   

Abstract

This study aimed to identify stromal molecular signatures associated with breast and prostate cancer. The microarray data GSE26910 was downloaded from Gene Expression Omnibus database, including six invasive breast tumor stroma, six matched normal controls, six invasive prostate tumor stroma, and six matched controls. The differentially expressed genes (DEGs) in invasive breast and prostate tumors stroma were, respectively, identified. Then common stromal genes (B_P.DEGs) were further screened. Protein-protein interaction (PPI) network was constructed and Gene Ontology analysis was performed. Besides, gene-chemical interactions were mapped in Comparative Toxicogenomics Database to screen the chemicals related to feature genes. The results showed that, in total, 16 B_P.DEGs were identified. Thereinto, only seven B_P.DEGs were mapped into PPI, and only four functional modules (adenylate cyclase activating polypeptide 1 (pituitary) receptor type I (ADCYAP1R1) module, aspartoacylase (ASPA) module, glutathione S-transferase mu 5 (GSTM5) module, and periplakin (PPL) module) were involved in important biological processes associated with cancer progression. In addition, the chemicals, such as dihydrotestosterone, apocarotenal, testosterone, and progesterone, were screened for the roles of feature genes in the progression of breast and prostate cancer. In conclusion, ADCYAP1R1, GSTM5, and PPL were stromal molecular signatures and might play a key role in the progression of breast and prostate cancer.

Entities:  

Keywords:  Gene Ontology analysis; bioinformatics analysis; chemicals; differentially expressed genes; stromal molecules

Mesh:

Substances:

Year:  2019        PMID: 31180245     DOI: 10.1089/cmb.2019.0045

Source DB:  PubMed          Journal:  J Comput Biol        ISSN: 1066-5277            Impact factor:   1.479


  4 in total

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2.  CircRNA_0084927 promotes colorectal cancer progression by regulating miRNA-20b-3p/glutathione S-transferase mu 5 axis.

Authors:  Feng Liu; Xiao-Li Xiao; Yu-Jing Liu; Ruo-Hui Xu; Wen-Jun Zhou; Han-Chen Xu; Ai-Guang Zhao; Yang-Xian Xu; Yan-Qi Dang; Guang Ji
Journal:  World J Gastroenterol       Date:  2021-09-28       Impact factor: 5.742

3.  Anti-Cancer Effects and Tumor Marker Role of Glutathione S-Transferase Mu 5 in Human Bladder Cancer.

Authors:  Yeong-Chin Jou; Shou-Chieh Wang; Yuan-Chang Dia; Shou-Tsung Wang; Min-Hua Yu; Hsin-Yi Yang; Lei-Chin Chen; Cheng-Huang Shen; Yi-Wen Liu
Journal:  Int J Mol Sci       Date:  2021-03-17       Impact factor: 5.923

Review 4.  Protective Effects of PACAP in Peripheral Organs.

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Journal:  Front Endocrinol (Lausanne)       Date:  2020-07-14       Impact factor: 5.555

  4 in total

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