Literature DB >> 31176995

Bottom-up synthetic biology: reconstitution in space and time.

Haiyang Jia1, Petra Schwille2.   

Abstract

Bottom-up reconstituting well-characterized functional molecular entities, parts and modules towards a synthetic cell will give new insights into the mechanisms and origin of life. However, a remaining central challenge is how to organize cellular processes spatiotemporally from their component parts in vitro. Here, we review cutting edge tools and technologies that can facilitate such a bottom-up reconstitution towards a synthetic cell in space and time, particularly with regard to the following aspects: (1) reliable model membrane-environment and microenvironment; (2) dynamic genetic regulation and self-sustaining transcription and translation machinery; (3) spatially organized cytoskeleton that supports the biological architecture and cellular self-reproduction in 3D.
Copyright © 2019 Elsevier Ltd. All rights reserved.

Mesh:

Year:  2019        PMID: 31176995     DOI: 10.1016/j.copbio.2019.05.008

Source DB:  PubMed          Journal:  Curr Opin Biotechnol        ISSN: 0958-1669            Impact factor:   9.740


  9 in total

1.  Liposome Preparation by 3D-Printed Microcapillary-Based Apparatus.

Authors:  Orion M Venero; Wakana Sato; Joseph M Heili; Christopher Deich; Katarzyna P Adamala
Journal:  Methods Mol Biol       Date:  2022

2.  3D printed protein-based robotic structures actuated by molecular motor assemblies.

Authors:  Michael Heymann; Sven K Vogel; Haiyang Jia; Johannes Flommersfeld; Henri G Franquelim; David B Brückner; Hiromune Eto; Chase P Broedersz; Petra Schwille
Journal:  Nat Mater       Date:  2022-05-26       Impact factor: 47.656

Review 3.  Self-Propulsion Strategies for Artificial Cell-Like Compartments.

Authors:  Ibon Santiago; Friedrich C Simmel
Journal:  Nanomaterials (Basel)       Date:  2019-11-25       Impact factor: 5.076

4.  Building a community to engineer synthetic cells and organelles from the bottom-up.

Authors:  Oskar Staufer; Jacqueline A De Lora; Eleonora Bailoni; Alisina Bazrafshan; Amelie S Benk; Kevin Jahnke; Zachary A Manzer; Lado Otrin; Telmo Díez Pérez; Judee Sharon; Jan Steinkühler; Katarzyna P Adamala; Bruna Jacobson; Marileen Dogterom; Kerstin Göpfrich; Darko Stefanovic; Susan R Atlas; Michael Grunze; Matthew R Lakin; Andrew P Shreve; Joachim P Spatz; Gabriel P López
Journal:  Elife       Date:  2021-12-20       Impact factor: 8.140

5.  Vesicle Induced Receptor Sequestration: Mechanisms behind Extracellular Vesicle-Based Protein Signaling.

Authors:  Oskar Staufer; Jochen Estebano Hernandez Bücher; Julius Fichtler; Martin Schröter; Ilia Platzman; Joachim P Spatz
Journal:  Adv Sci (Weinh)       Date:  2022-03-01       Impact factor: 17.521

6.  Actinosomes: Condensate-Templated Containers for Engineering Synthetic Cells.

Authors:  Ketan A Ganar; Liza Leijten; Siddharth Deshpande
Journal:  ACS Synth Biol       Date:  2022-08-10       Impact factor: 5.249

7.  Halogenation of tyrosine perturbs large-scale protein self-organization.

Authors:  Huan Sun; Haiyang Jia; Olivia Kendall; Jovan Dragelj; Vladimir Kubyshkin; Tobias Baumann; Maria-Andrea Mroginski; Petra Schwille; Nediljko Budisa
Journal:  Nat Commun       Date:  2022-08-17       Impact factor: 17.694

Review 8.  Modular engineering for microbial production of carotenoids.

Authors:  Cheng Li; Charles A Swofford; Anthony J Sinskey
Journal:  Metab Eng Commun       Date:  2019-12-15

9.  Transcription and Translation in Cytomimetic Protocells Perform Most Efficiently at Distinct Macromolecular Crowding Conditions.

Authors:  Mahesh A Vibhute; Mark H Schaap; Roel J M Maas; Frank H T Nelissen; Evan Spruijt; Hans A Heus; Maike M K Hansen; Wilhelm T S Huck
Journal:  ACS Synth Biol       Date:  2020-10-05       Impact factor: 5.110

  9 in total

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