Literature DB >> 31173088

Overexpression of the peanut CLAVATA1-like leucine-rich repeat receptor-like kinase AhRLK1 confers increased resistance to bacterial wilt in tobacco.

Chong Zhang1,2,3, Hua Chen1,2, Rui-Rong Zhuang1,4, Yu-Ting Chen1,2, Ye Deng1,2, Tie-Cheng Cai1,2, Shuai-Yin Wang1,2, Qin-Zheng Liu1,2, Rong-Hua Tang5, Shi-Hua Shan6, Rong-Long Pan7, Li-Song Chen2,3, Wei-Jian Zhuang1,2.   

Abstract

Bacterial wilt caused by Ralstonia solanacearum is a devastating disease affecting hundreds of plant species, yet the host factors remain poorly characterized. The leucine-rich repeat receptor-like kinase gene AhRLK1, characterized as CLAVATA1, was found to be up-regulated in peanut upon inoculation with R. solanacearum. The AhRLK1 protein was localized in the plasma membrane and cell wall. qPCR results showed AhRLK1 was induced in a susceptible variety but little changed in a resistant cultivar after inoculated with R. solanacearum. Hormones such as salicylic acid, abscisic acid, methyl jasmonate, and ethephon induced AhRLK1 expression. In contrast, AhRLK1 expression was down-regulated under cold and drought treatments. Transient overexpression of AhRLK1 led to a hypersensitive response (HR) in Nicotiana benthamiana. Furthermore, AhRLK1 overexpression in tobacco significantly increased the resistance to R. solanacearum. Besides, the transcripts of most representative defense responsive genes in HR and hormone signal pathways were significantly increased in the transgenic lines. EDS1 and PAD4 in the R gene signaling pathway were also up-regulated, but NDR1 was down-regulated. Accordingly, AhRLK1 may increase the defense response to R. solanacearum via HR and hormone defense signaling, in particular through the EDS1 pathway of R gene signaling. These results provide a new understanding of the CLAVATA1 function and will contribute to genetic enhancement of peanut.
© The Author(s) 2019. Published by Oxford University Press on behalf of the Society for Experimental Biology.

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Keywords:  zzm321990 AhRLK1zzm321990 ; zzm321990 Arachis hypogaeazzm321990 ; zzm321990 EDS1zzm321990 ; zzm321990 Ralstonia solanacearumzzm321990 ; defense signaling; transgenic tobacco

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Year:  2019        PMID: 31173088      PMCID: PMC6793444          DOI: 10.1093/jxb/erz274

Source DB:  PubMed          Journal:  J Exp Bot        ISSN: 0022-0957            Impact factor:   6.992


Introduction

Bacterial wilt (BW) caused by Ralstonia solanacearum is a severe soil-borne disease that affects plants worldwide. The hosts of R. solanacearum include over 450 species belonging to 54 botanical families (Zhang ). BW reduces peanut output by 10–30% in infected areas and can lead to total crop failure in heavily infected regions, thus causing significant economic loss (Wicker ; Yu ). To date, efficient methods to control BW remain unavailable, and farmers rely on rotation, intercropping with other non-host crops, and biological control to reduce the incidence of BW. Plants have evolved a multi-layered innate immune system to defend against pathogens. Pattern recognition receptors (PRRs) on the plant cell surface act as initial detectors that recognize pathogen-associated or damage-associated molecular patterns to elicit the first-layer immune response called pathogen-associated molecular pattern-triggered immunity (PTI) (Jones and Dangl, 2006; Zipfel, 2014). PTI prevents infections by non-adapted pathogens. Some pathogens deploy effectors that contribute to their virulence. Effectors subsequently interfere with PTI and cause effector-triggered susceptibility. In resistant plants, these effectors are recognized by R proteins to induce effector-triggered immunity (ETI) (Jones and Dangl, 2006) and the co-evolution of PTI and ETI has shaped the plant immune system (Böhm ). Most PRRs are characterized as leucine-rich repeat receptor-like protein kinases (LRR-RLKs) that comprise a class of RLKs in plants (Zhang, 1998). LRR-RLK proteins regulate plant growth and development (Morris and Walker, 2003), hormone signal transduction (Hong ), and response to biotic or abiotic stresses (Nishiguchi ; Torii, 2004). LRR-RLKs are also involved in plant defense-related disease resistance (Song ; Godiard ). A typical LRR-RLK has extracellular domains (LRR), a single transmembrane domain flanked by juxta membrane regions, and cytoplasmic protein kinase domains (Dardick ; Zhang and Thomma, 2013; Böhm ). LRR domains function as binding sites that recognize pathogen-derived elicitors to activate downstream signal transduction by the cytoplasmic protein kinase domains, thereby activating the plant’s defensive immune response (Jones and Jones, 1997; Dardick ; Böhm ). FLAGELLIN SENSITIVE2 (FLS2), an LRR-RLK protein, is a plasma membrane receptor involved in the recognition of pathogen flagellin (Gómez-Gómez and Boller, 2000). FLS2 can bind to flagellin through its extracellular domain, and the kinase domain is required to trigger an immune response (Gómez-Gómez and Boller, 2000; Gómez-Gómez ). Xa21 is a LRR-RLK gene involved in resistance to leaf blight in rice (Wang ). Xa21 has 21 LRR motifs that recognize pathogen ligands, eliciting plant defense responses, such as oxidative bursts, hypersensitive cell death, and activation of defense genes through the activity of its intracellular kinases (Song ; Wang ). ERECTA is an Arabidopsis LRR-RLK involved in the resistance response to R. solanacearum (Godiard ), and it activates the expression of downstream resistance-related genes against R. solanacearum by the phosphorylation of its extracellular kinase (Godiard ). In addition, ERECTA triggers a resistance response to the necrotrophic fungus Plectosphaerella cucumerina in Arabidopsis (Llorente ). An increasing number of LRR-RLKs have been identified, but their resistance mechanisms in plant–pathogen interactions remain elusive. In the present study, an LRR-RLK gene named AhRLK1 was identified in peanut by microarray analysis. AhRLK1, characterized as CLAVATA1, was up-regulated in a peanut cultivar susceptible to BW but its expression was nearly unchanged in a resistant cultivar. Treatment with different hormones and cold or drought stress altered the expression of AhRLK1. Transient overexpression of AhRLK1 caused a hypersensitive response (HR) in N. benthamiana following agro-infiltration. Furthermore, overexpression of AhRLK1 in N. tabacum produced increased resistance to R. solanacearum. The expression levels of various stress-responsive genes, including those of R gene signaling, were also significantly induced in the AhRLK1-overexpressing transgenic lines. Therefore, these results suggest that AhRLK1 is involved in the defense response of peanut to R. solanacearum and in the resistance conferred by multiple, complex signaling regulatory networks.

Materials and methods

Plant material and growth conditions

Peanut (Arachis hypogaea) cultivars that were middle resistant (Minhua 6), hyper-resistant (Yueyou 92), and hypersusceptible (Xinhuixiaoli) to R. solanacearum were obtained from the Oil Crop Institute of Fujian Agriculture and Forestry University. Seeds were sown in sterile sand in 5×6 cm plastic pots. The Tobacco Research Group of Fujian Agriculture and Forestry University provided the seedlings of transgenic lines, wild-type tobacco lines (Nicotiana tabacum cv. CB-1, cv. Honghuadajinyuan, and cv. Yanyan97 with medium susceptibility, hypersusceptibility, and hyper-resistance to R. solanacearum, respectively) and those of N. benthamiana. All seedlings were grown in a greenhouse. T1 and T2 seeds of transgenic tobacco lines were surface-sterilized with 75% (w/v) alcohol for 20 s and 10% (v/v) H2O2 for 10 min, washed five times with sterile water, and then placed on Murashige–Skoog (MS) medium supplemented with 75 mg l−1 kanamycin for 2–3 weeks. The surviving plants were transferred into a soil mix (peat moss/perlite, 2:1, v/v) in a plastic tray and grown in a greenhouse for another 2–3 weeks. Transgenic and wild-type tobacco plants of the same size were transferred into the same soil mixed in plastic pots and grown for another 3–4 weeks. The peanut and tobacco plants were grown in a greenhouse at 26±2 °C, with 70% relative humidity and a 16 h light/8 h dark cycle.

Pathogens and inoculation procedures

Virulent R. solanacearum strains Rs-P.362200-060707-2-2 for peanut and FJ1003 for tobacco were provided by Prof. Bo Liu of the Fujian Academy of Agricultural Sciences. Two strains were streaked on TTC agar medium (Kelman ) and incubated at 28 °C for 48 h. The two virulent strains were cultured and inoculated in peanut and tobacco following published protocols (Zhang ). The pathogen cell solution used for R. solanacearum infection of peanut and tobacco plants for functional characterization of AhRLK1 was diluted to 108 colony forming units (cfu) ml−1 (OD600=0.5) with ddH2O. The leaves were harvested at the indicated time points for the preparation of RNA. For the transient overexpression of AhRLK1 in N. benthamiana, 108 cfu ml−1Agrobacterium was infiltrated into the second leaf of 2-month-old tobacco from the top using a syringe without a needle until the bacterial suspensions were spread over the entire leaf. The third leaf was harvested at the indicated time points, immediately frozen in liquid nitrogen, and stored at −80 °C.

Application of plant hormones or abiotic and biotic stresses

One-month-old peanut (Minhua 6) seedlings were sprayed with 3 mM salicylic acid (SA), 37.8 µM abscisic acid (ABA), 10 mM ethephon (ET), or 100 µM methyl jasmonate (MeJA) dissolved in distilled water. Control seedlings were sprayed only with distilled water. The leaves of the treated seedlings were harvested, frozen in liquid nitrogen, and stored at −80 °C. For cold stress, peanut (Minhua 6) plants at the seven-leaf stage were treated at a low temperature of 4 °C or a normal temperature of 25 °C, and leaves were collected at various time points. For drought stress, the seven to eight leaf peanut plants were planted in 5×6 cm plastic pots in the greenhouse at 28 °C; the soil moisture was saturated before treatment. The control plants were given water every day as the normal watering. Drought-treated plants were left without water for 4 d after the initial watering, and the samples were collected after 24, 48 and 96 h. All experiments had three biological replicates. All samples were frozen in liquid nitrogen and stored at −80 °C.

Cloning of full-length AhRLK1 cDNA

AhRLK1 was identified as a candidate differentially expressed gene using a high-density peanut microarray with 100 000 unigenes, which was devised by our laboratory and created by the Roche Company (Roche, Branford, CT, USA). AhRLK1 was isolated by chip hybridization using RNA extracted from peanut plants with or without inoculation of R. solanacearum. For cloning of full-length AhRLK1, the AhRLK1-F and AhRLK1-R primers were designed from the available gene fragments. The 5′- and 3′-end sequences of the cDNA were cloned through rapid amplification of cDNA ends (RACE) using a SMART™ RACE cloning kit (Clontech, Palo Alto, CA, USA) following the manufacturer’s instructions with minor modifications. Total RNA was extracted from leaves of the peanut cultivar hyper-resistant to R. solanacearum using the cetyltrimethylammonium bromide (CTAB) method (Chen ). The adaptor primers of RACE-F and 3′ PCR primer were ligated to both ends of the cDNA. The 5′ RACE was generated by PCR with RACE-F and AhRLK1-R primers. Similarly, the 3′ RACE was generated by the set of AhRLK1-F and the 3′ PCR primers. The RACE products were ligated to the pMD18-T vector (TaKaRa Biotechnology Co., Dalian, China) following the manufacturer’s instructions and sequenced. After assembly, the full-length cDNA sequence of AhRLK1 was cloned from the reverse transcription products using AhRLK1-FL-F and AhRLK1-FL-R. All primers are listed in Supplementary Table S1 at JXB online.

Sequence analysis and phylogenetic tree construction

AhRLK1 sequence similarity analysis was performed using BLASTN and BLASTX (http://www.ncbi.nlm.nih.gov/BLAST). Conserved domains of the AhRLK1-encoded protein were analysed using SMART (Simple Modular Architecture Research Tool; http://smart.embl-heidelberg.de/). Multiple sequence alignments were obtained from known functional LRR–RLKs of different species using Clustal2W. A phylogenetic tree of the different subfamilies of LRR-RLKs in Arabidopsis was generated using the MEGA6 program (Tamura ).

Subcellular localization, co-localization, and plasmolysis experiments

For the green fluorescent protein (GFP) fusion vector, the full-length open-reading frame of AhRLK1 without the termination codon was amplified by the gene-specific primers AhRLK1-BamH1-F and AhRLK1-Asc1-R harboring BamHI and AscI sites, respectively. The PCR products and the pBI-GFP vector (provided by W-JZ) were both digested with BamHI and AscI. The corresponding bands were recovered and ligated to the 35S::AhRLK1-GFP expression vector. The 35S::GFP vector (provided by W-JZ) and 35S::CaSRC2-1-RFP (specifically targeting the plasma membrane; Liu ) were used as a control. For yellow fluorescent protein (YFP) fusion vector, a Gateway cloning technique (Invitrogen, Carlsbad, CA, USA) and a Gateway-compatible destination vector were employed. The full-length open reading frame (ORF) of AhRLK1 was initially amplified by PCR with corresponding specific primer pair (Supplementary Table S1) flanked with attB for Gateway cloning and GXL DNA polymerase (Takara, Osaka, Japan), and confirmed by sequencing. The full-length cDNA was cloned into the entry vector pDONR207 by BP reaction, and then into destination vectors pEarleyGate101 (Invitrogen) by LR reaction. All vectors were transformed into Agrobacterium strain GV3101. The Agrobacterium strains harboring the above mentioned constructs were grown for 24 h in YEP medium (10 g l−1 yeast extract, 10 g l−1 peptone, and 5 g l−1 NaCl) containing appropriate antibiotics and cultured to OD600=1.0 in induction medium (10 mM methanesulfonic acid, pH 5.7, 10 mM MgCl2, and 200 mM acetosyringone) and diluted to OD600=0.8. The diluted culture was infiltrated into N. benthamiana leaves using a syringe without a needle. For co-localization experiment, 35S::AhRLK1-GFP and 35S::CaSRC2-1-RFP constructs were mixed at 1:1 ratio, and co-infiltrated into N. benthamiana leaves. For plasmolysis experiments, the tobacco leaves were immersed in 10% sorbitol for 20 min before detection. After 48 h of infection, different fluorescences were visualized using a laser scanning confocal microscope (TCS SP8, Leica, Solms, Germany). Digital images were overlaid using ImageJ.

AhRLK1 overexpression vector construction, transient expression, and tobacco transformation

The complete ORF of AhRLK1 was amplified by high-fidelity PCR polymerase with pMD-T-AhRLK1 as the template using AhRLK1-OE-F and AhRLK1-OE-R primers. The PCR products and the pBI121-GUSA vector (provided by W-JZ) were digested with BamHI and AscI; the corresponding bands were recovered and ligated into pBI121-GUSA, creating the overexpression vector 35S::AhRLK1, which drives expression of AhRLK1 under the 2×CaMV 35S promoter. The 35S::AhRLK1 plasmid was transferred into Agrobacterium tumefaciens strain GV3101. For transient overexpression, Agrobacterium GV3101 with the 35S::AhRLK1 plasmid was injected into N. benthamiana leaves by Agrobacterium infiltration and then transformed into tobacco using the leaf-disc method (Müller ). To confirm transgene integration, the initial transgenic T0 lines were selected by kanamycin and further confirmed by RT-PCR. The T2 homozygous lines that were generated through this process were used for experiments in this study.

In silico analysis and quantitative real-time PCR

In silico analysis of the AhRLK1 gene expression pattern in peanut was performed using non-amplified double stranded cDNA for hybridization as described previously (Chen ). The gene expression intensity of all hybridization experiments was analysed, and expression levels were estimated for different tissues and under diverse stress conditions. Three replicates were performed for all experiments. The data from the tobacco microarray were generated previously (Zhang ). Leaves were harvested from hyper-resistant tobacco variety Yanyan 97 and the hypersusceptible tobacco variety Honghuadajinyuan that were inoculated with R. solanacearum. Microarray design, hybridization, washing, scanning, and data analysis were conducted as previously described (Zhang ). For qRT-PCR analysis, total RNA isolation and real-time RT-PCR were carried out following procedures used in our previous studies (Chen ; Zhang ). At least three replicates of each experiment were performed. Data were analysed by the method of Schmittgen and Livak (2008) and shown as a normalized relative expression level (2−ΔΔ) of the respective genes. The relative transcript levels of AhRLK1 were detected under different treatments in peanut, with Ahactin used as the internal reference as reported previously (Chen ; Zhang ). The relative transcript levels of related defense genes after R. solanacearum treatment were detected between the wild-type and transgenic tobacco plants, with tobacco NtEF1α as the internal reference. All primers used in the qPCR analyses are listed in Supplementary Table S1.

Histochemical staining analysis and ion conductivity determination

At 48 h after the transient overexpression of AhRLK1 in N. benthamiana leaves, the infected plants were stained with 3,3′-diaminobenzidine (DAB; Sigma-Aldrich, St Louis, MO, USA) and lactophenol–ethanol trypan blue. To measure the levels of H2O2, the infected N. benthamiana leaves were incubated in 1 mg ml−1 DAB solution overnight at room temperature, boiled for 5 min in a 3:1:1 ethanollactic acidglycerol solution, and then placed in absolute ethanol before observation. To detect cell death, the inoculated leaves were boiled for 2 min in trypan blue solution, which consisted of 10 ml of lactic acid, 10 ml of glycerol, 10 g of phenol, 30 ml of absolute ethanol, and 10 mg of trypan blue, dissolved in 10 ml of ddH2O. They were left at room temperature overnight, transferred into a chloral hydrate solution (2.5 g of chloral hydrate dissolved in 1 ml of distilled water), and then boiled for 20 min for de-staining. The leaves were observed under a light microscope. Ion conductivity was measured as previously described (Hwang and Hwang, 2011) with minor modifications. Six round leaf discs (11 mm in diameter) per agro-infiltrated leaf were cut, washed in ddH2O, and incubated in 20 ml of ddH2O with evacuation for 10 min at room temperature. Electrolyte leakage was measured with a Mettler Toledo 326 apparatus.

Results

Sequence characteristics of AhRLK1 isolated from peanut

After microarray data analysis, one LRR receptor like kinase gene was selected that was up-regulated after R. solanacearum inoculation in peanut, and named AhRLK1 (Supplementary Dataset S1). The unknown 5′ and 3′ cDNA sequences of AhRLK1 were cloned by RACE. The full-length cDNA sequence was isolated from total RNA of peanut leaves using RT-PCR (Supplementary Fig. S1). The full-length cDNA contained a 3292 bp ORF encoding a polypeptide of 992 amino acids with 122 and 251 bp for 5′ and 3′ untranslated terminal regions, respectively (Fig. 1; Supplementary Dataset S2). Sequence analysis showed the deduced AhRLK1 protein contained the typical serine/threonine protein kinase catalytic domain and 10 LRR conserved domains (LxxLxxLxxLxLxxC/A-xx) (Kobe and Kajava, 2001; Zhou, ) (Fig. 1; Supplementary Fig. S2). In addition, the protein had a signal peptide in the N-terminal region (Fig. 1).
Fig. 1.

Sequence and structure analysis of the AhRLK1 gene. (A) Complete cDNA and deduced amino acid sequences of the AhRLK1 gene. The full-length cDNA was 3292 bp with an ORF encoding 992 amino acids. The gray-shaded portion shows the signal peptide domain, and the green-shaded portion indicates the LRR units; the transmembrane domain is in the yellow-shaded region. The underlined red sequences show the serine/threonine protein kinase catalytic domain. (B) LRR domain of AhRLK1, including several degenerate LRR units. The consensus sequence for the AhRLK1 LRR is given at the bottom. The core leucines and prolines (or equivalent amino acids) are highlighted in gray. X represents an arbitrary amino acid residue. The L-residues in the consensus sequence represent several residues at that position. (This figure is available in color at JXB online.)

Sequence and structure analysis of the AhRLK1 gene. (A) Complete cDNA and deduced amino acid sequences of the AhRLK1 gene. The full-length cDNA was 3292 bp with an ORF encoding 992 amino acids. The gray-shaded portion shows the signal peptide domain, and the green-shaded portion indicates the LRR units; the transmembrane domain is in the yellow-shaded region. The underlined red sequences show the serine/threonine protein kinase catalytic domain. (B) LRR domain of AhRLK1, including several degenerate LRR units. The consensus sequence for the AhRLK1 LRR is given at the bottom. The core leucines and prolines (or equivalent amino acids) are highlighted in gray. X represents an arbitrary amino acid residue. The L-residues in the consensus sequence represent several residues at that position. (This figure is available in color at JXB online.) The amino acid sequences of AhRLK1 were then compared with homologous genes, and AhRLK1 shared 61% identity and 75% similarity to Arabidopsis CLAVATA1, 34% identity and 50% similarity to ERECTA, 50% identity and 67% similarity to BAM1, and 49% identity and 67% similarity to BAM2 (Supplementary Dataset S3; Supplementary Fig. S2). A phylogenetic tree of AhRLK1 and its homologs was constructed, which confirmed that AhRLK1 is a member of the LRR XI subfamily, with highest similarity to At1g75820 (Accession Number: NP_177710), which encodes the CLAVATA1 (CLV1) protein (Fig. 2; Supplementary Dataset S4; Supplementary Fig. S3). CLAVATA1 mainly plays an important role in shoot and root meristem and flower development in Arabidopsis (Clark ), but participates in the signaling pathway during nodulation in Medicago truncatula (Laffont ). Interestingly, a mutant of the CLAVATA1 (CLV1) gene conferred enhanced disease resistance to bacterial wilt (Hanemian ). However, these two kinases may have significantly diverged in their functions; thus, AhRLK1 may be related to disease resistance and meristem development.
Fig. 2.

Phylogenetic tree constructed with AhRLK1 and different subfamilies of LRR-RLK proteins in Arabidopsis. The phylogenetic tree confirms that AhRLK1 is a member of the LRR XI family; AhRLK1 is indicated by a red circle. Alignments were conducted in ClustalW, and the phylogenetic tree was constructed by the neighbor-joining algorithm in MEGA 6 software. Bootstrap values (1000 replicates) are shown as percentages at the branch nodes. (This figure is available in color at JXB online.)

Phylogenetic tree constructed with AhRLK1 and different subfamilies of LRR-RLK proteins in Arabidopsis. The phylogenetic tree confirms that AhRLK1 is a member of the LRR XI family; AhRLK1 is indicated by a red circle. Alignments were conducted in ClustalW, and the phylogenetic tree was constructed by the neighbor-joining algorithm in MEGA 6 software. Bootstrap values (1000 replicates) are shown as percentages at the branch nodes. (This figure is available in color at JXB online.)

Subcellular localization of AhRLK1

Sequence analysis predicted that AhRLK1 is a plasma membrane-bound kinase (Query Protein WoLFPSORT prediction plas: 29.29 by http://www.genscript.com/psort/wolf_psort.html). A vector expressing the AhRLK1–GFP fusion protein under the constitutive CaMV35S promoter was generated and the 35S::GFP vector was used as the negative control. AhRLK1–GFP was mainly localized to the plasma membrane, whereas GFP was localized broadly in different subcellular compartments, including the cytoplasm and nuclei (Fig. 3). Co-expression of AhRLK1–GFP and CaSRC2-1–red fluorescent protein (RFP), a protein that binds to the plasma membrane, showed complete overlap of the green fluorescence signal of AhRLK1–GFP and the red fluorescence signal in the plasma membrane (Supplementary Fig. S4). Plasmolysis experiments for AhRLK1 subcellular localization showed that AhRLK1 was primarily localized to cell wall and plasma membrane, and occasionally to membrane vesicles (Supplementary Fig. S4). These results suggest that AhRLK1 is a plasma membrane- and cell wall-associated kinase.
Fig. 3.

Subcellular localization of AhRLK1 protein. AhRLK1–GFP was localized in the plasma membrane of Nicotiana benthamiana leaves; GFP alone was localized throughout entire cells. Fluorescence (left), bright field (middle), and merged images (right) were obtained at 48 h using Leica confocal microscopy after agro-infiltration. Sale bar: 25 μm. (This figure is available in color at JXB online.)

Subcellular localization of AhRLK1 protein. AhRLK1–GFP was localized in the plasma membrane of Nicotiana benthamiana leaves; GFP alone was localized throughout entire cells. Fluorescence (left), bright field (middle), and merged images (right) were obtained at 48 h using Leica confocal microscopy after agro-infiltration. Sale bar: 25 μm. (This figure is available in color at JXB online.)

AhRLK1 showed diverse expression patterns among tissues

In silico analysis of AhRLK1 expression with three unigenes was performed using a high-density microarray. These unigenes, with more than 97% sequence identity, appeared to belong to the same AhRLK1 gene family. Non-amplified double strand cDNA was used to evaluate the transcript levels of unigenes in the microarray. The expression profiles of these three members were similar in different tissues, with the highest expression in the roots and stem, followed by leaves, flowers, pegs, and testa. However, expression was weak in the pericarp, and embryos had the lowest expression levels (Fig. 4; Supplementary Dataset S5). Semi-quantitative RT-PCR also showed that AhRLK1 expression was higher in the root and stem, and low in embryos of different developmental stages (Fig. 4).
Fig. 4.

Expression intensity of three AhRLK1 gene members assayed by microarray and semi-quantitative RT-PCR identified AhRLK1 gene expression among different tissues in peanut. The AhRLK1 family showed tissue-specific expression in peanut, with the highest levels in the roots and stem. Weak expression was found in pericarp and embryo. UN_p_31907, UN_p_16310, and UN_pchu_18723 are AhRLK1 and the two other members of the same family, respectively. Root, Stem, Leaf, Flower, Peg, Testa, Pericarp, and Embryo indicate different tissues of peanut; Pericarp20, 40, and 60 indicate pericarp development after pegging 20, 40, and 60 days; Embryo20, 40, and 60 indicate embryo development after pegging 20, 40 and 60 days. The microarray data were from three independent repetitions of the biological experiments. Error bars indicate the standard error.

Expression intensity of three AhRLK1 gene members assayed by microarray and semi-quantitative RT-PCR identified AhRLK1 gene expression among different tissues in peanut. The AhRLK1 family showed tissue-specific expression in peanut, with the highest levels in the roots and stem. Weak expression was found in pericarp and embryo. UN_p_31907, UN_p_16310, and UN_pchu_18723 are AhRLK1 and the two other members of the same family, respectively. Root, Stem, Leaf, Flower, Peg, Testa, Pericarp, and Embryo indicate different tissues of peanut; Pericarp20, 40, and 60 indicate pericarp development after pegging 20, 40, and 60 days; Embryo20, 40, and 60 indicate embryo development after pegging 20, 40 and 60 days. The microarray data were from three independent repetitions of the biological experiments. Error bars indicate the standard error.

AhRLK1 responds to exogenous phytohormones and bio/abiotic stresses

The expression of AhRLK1 under exogenous phytohormone treatments was determined using the medium resistance variety Minhua 6 at the eight-leaf stage (Fig. 5). When treated with 3 mM SA, the AhRLK1 transcripts increased up to 6.6-fold at 6 h post-treatment (hpt) and then gradually decreased to levels slightly higher (<3-fold) than those of the control plants (Fig. 5A). The expression of AhRLK1 also increased when plants were treated with 37.8 µM ABA, reaching a single peak of 4.5-fold at 6 hpt (Fig. 5B). In response to 10 mM ET, AhRLK1 expression increased with two peaks (2.6- and 2.8-fold) at 3 and 24 hpt, respectively, after which the expression level returned to baseline (Fig. 5C). Plants treated with 100 µM MeJA showed progressive increase in AhRLK1 expression, with the highest expression level (3.8-fold induction) at 6 hpt (Fig. 5D).
Fig. 5.

qRT-PCR analysis of AhRLK1 transcripts in peanut cultivar Minhua 6 under exogenous phytohormones and bio/abiotic treatments. (A–D) Relative levels of AhRLK1 expression in peanut leaves at different time points after treatment with (A) salicylic acid (SA, 3 mM), (B) abscisic acid (ABA, 37.8 µM), (C) ethephon (ET, 10 mM), and (D) methyl jasmonate (MeJA, 100 µM). (E, F) AhRLK1 expression performed at various hourly intervals after treatment with low temperature (4 °C) (E) and drought (F) in peanut plants at the eight-leaf stage. (G) AhRLK1 transcripts tested at different time points of resistant (YY92) and susceptible (XH) peanut cultivars after leaf cutting inoculation with virulent R. solanacearum Rs-P.362200-060707-2-2. The relative expression level of AhRLK1 in peanut plants at various time points was compared with that in mock or control plants, which was set to 1. The experiments were repeated three times along with at least three independent repetitions of the biological experiments. Asterisks indicate a significant difference as determined by Fisher’s protected LSD test (*P<0.05, **P<0.01). Error bars indicate the standard error; data are means ±SE, n=3.

qRT-PCR analysis of AhRLK1 transcripts in peanut cultivar Minhua 6 under exogenous phytohormones and bio/abiotic treatments. (A–D) Relative levels of AhRLK1 expression in peanut leaves at different time points after treatment with (A) salicylic acid (SA, 3 mM), (B) abscisic acid (ABA, 37.8 µM), (C) ethephon (ET, 10 mM), and (D) methyl jasmonate (MeJA, 100 µM). (E, F) AhRLK1 expression performed at various hourly intervals after treatment with low temperature (4 °C) (E) and drought (F) in peanut plants at the eight-leaf stage. (G) AhRLK1 transcripts tested at different time points of resistant (YY92) and susceptible (XH) peanut cultivars after leaf cutting inoculation with virulent R. solanacearum Rs-P.362200-060707-2-2. The relative expression level of AhRLK1 in peanut plants at various time points was compared with that in mock or control plants, which was set to 1. The experiments were repeated three times along with at least three independent repetitions of the biological experiments. Asterisks indicate a significant difference as determined by Fisher’s protected LSD test (*P<0.05, **P<0.01). Error bars indicate the standard error; data are means ±SE, n=3. The expression of AhRLK1 under low temperature and drought was also examined in eight-leaf Minhua 6 seedlings (Fig. 5E, F). AhRLK1 expression changed at 6 hpt under low temperature stress, and at 24–48 hpt upon drought stress. Specifically, the transcript level of AhRLK1 under low temperature was the most reduced, decreasing 6.13-fold at 6 hpt (Fig. 5E). Under drought treatment, AhRLK1 expression level decreased by 2-fold at 24 and 48 hpt, but increased by 1.54-fold at 96 hpt (Fig. 5F). The transcript levels of AhRLK1 were determined by qPCR at different time points after R. solanacearum inoculation of resistant (YY92) and susceptible (XH) peanut cultivars. In YY92, AhRLK1 expression did not change within 48 h after inoculation with a highly virulent R. solanacearum strain. In contrast, the expression level of AhRLK1 in XH gradually increased up to 16-fold at 96 h post-inoculation (hpi) (Fig. 5G). This obvious transcriptional response suggested that AhRLK1 may respond to R. solanacearum infection in peanut.

Transient overexpression of AhRLK1 in N. benthamiana leaves induced a hypersensitive response

To verify whether AhRLK1 overexpression caused hypersensitive response (HR) cell death, 35S::AhRLK1 was transformed into Agrobacterium GV3101 and transiently expressed in N. benthamiana leaves by infiltration. At 48 h after infiltration, the transient overexpression of AhRLK1 in N. benthamiana leaves induced an intensive HR that mimicked cell death, whereas no visible HR cell death was found in the plants infiltrated with GV3101 harboring the empty vector 35S::00. Electrolyte leakage measurement and dark trypan blue staining showed that AhRLK1 overexpression triggered HR in N. benthamiana leaves (Fig. 6A, B). DAB staining revealed high H2O2 accumulation in N. benthamiana leaves after AhRLK1 overexpression (Fig. 6B). Therefore, the transient overexpression of AhRLK1 in tobacco leaves likely induced HR and H2O2 generation, as it would in response to stress.
Fig. 6.

Effect of AhRLK1 transient overexpression on immunity induction in N. benthamiana. (A) Electrolyte leakage of N. benthamiana leaves infiltrated with the Agrobacterium strain GV3101 containing 35S::AhRLK1 and 35S::00. Asterisks mark statistically significant differences between the wild-type and 35S::AhRLK1 tobacco, as determined by Fisher’s protected LSD test (**P<0.01). Error bars indicate the standard error; data are means ±SE, n=3. (B) DAB and trypan blue staining, respectively, of cell death in N. benthamiana leaves 48 h after AhRLK1–Agrobacterium infiltration. (This figure is available in color at JXB online.)

Effect of AhRLK1 transient overexpression on immunity induction in N. benthamiana. (A) Electrolyte leakage of N. benthamiana leaves infiltrated with the Agrobacterium strain GV3101 containing 35S::AhRLK1 and 35S::00. Asterisks mark statistically significant differences between the wild-type and 35S::AhRLK1 tobacco, as determined by Fisher’s protected LSD test (**P<0.01). Error bars indicate the standard error; data are means ±SE, n=3. (B) DAB and trypan blue staining, respectively, of cell death in N. benthamiana leaves 48 h after AhRLK1–Agrobacterium infiltration. (This figure is available in color at JXB online.)

Overexpression of AhRLK1 in tobacco increased resistance to R. solanacearum

To evaluate whether AhRLK1 is involved in resistance to R. solanacearum, the conventional tobacco cultivar CB-1 that has medium susceptibility to bacterial wilt was transformed with a vector containing AhRLK1 under the CaMV35S promoter using the Agrobacterium-mediated method. The vector frame is shown in Fig. 7A. Transgenic T0 and T1 tobacco plants were generated and examined for tobaccoR. solanacearum interaction. Compared with the wild-type cv. CB-1, the T1 transgenic generation AhRLK1-OE plants showed no morphological difference. The transgenic plants showed significantly increased resistance to bacterial wilt at 40 d post-inoculation (dpi) with R. solanacearum. Most control plants died, with only 4 of the 65 wild-type plants surviving after R. solanacearum inoculation. However, most transgenic plants showed high resistance to bacterial wilt, and the death rate was greatly reduced (Supplementary Fig. S5). Three T2 transgenic homozygous lines were obtained and inoculated with the pathogen (AhRLK1-OE, Fig. 7B). All transgenic lines exhibited increased resistance against R. solanacearum. Obvious wilting symptoms were observed on the leaves of wild-type plants at 7 dpi, but only slight wilting symptoms were observed on the AhRLK1-OE leaves (Fig. 7C, D). Severe wilting symptoms were observed in the wild-type plants at 15 dpi but not in the AhRLK1-OE transgenic lines. AhRLK1 resistance was further evaluated in the hypersusceptible cultivar Honghuadajinjuan and six transgenic T2 homozygous lines, which were inoculated and compared with the wild-type. Semi-quantitative PCR analysis results showed that AhRLK1 was constitutively expressed in six T2 tobacco lines (Supplementary Fig. S6), and these lines showed increased resistance to R. solanacearum (Fig. 7E; Supplementary Fig. S7). Line 1 displayed the highest resistance with a low infection index (21.84%) and death rate (6.80%) at 21 dpi. In comparison, the wild-type showed serious wilting, with a 95.64% index and death rate of 86.05% at 21 dpi (Table 1; Supplementary Table S2). Taken together, AhRLK1 overexpression greatly increased disease resistance against R. solanacearum in tobacco.
Fig. 7.

Overexpression of AhRLK1 increased resistance to Ralstonia solanacearum in transgenic tobacco. (A) Schematic representation of the pBI121-AhRLK1 construct. 2×35S Pro, two cauliflower mosaic virus 35S promoters; LB and RB, the left and right borders of the T-DNA; Kanr, kanamycin resistance; Nos-T, nos-terminator. (B) RT-PCR analysis of AhRLK1 expression in transgenic and wild-type tobacco plants; the expression level of NtActin was visualized as the endogenous control. (C) Third leaves of 8-week-old wild-type tobacco (CB-1, a medium susceptible cultivar) and AhRLK1-OE transgenic plants inoculated with a 10 µl suspension of 108 cfu ml−1 of a highly virulent R. solanacearum strain. Photos were obtained at 15 d post-inoculation (dpi). (D) Disease symptoms of detached leaves of wild-type and AhRLK1-OE transgenic plants after inoculation with R. solanacearum. Transgenic leaves showed immune resistance or the highly resistant phenotype. Photos were obtained at 7 and 15 dpi. (E) Overexpression of AhRLK1 in the hypersusceptible tobacco shows significantly enhanced resistance to Ralstonia solanacearum. Honghuadajinyuan is the hypersusceptible tobacco cultivar as transgenic host control; Yanyan 97 is a hyper-resistant tobacco cultivar as resistant control. OE-1, OE-7, OE-19, OE-32, OE-43, and OE-46 are different transgenic lines. Photos were obtained at 15 days post-inoculation (dpi) of plants after inoculation with R. solanacearum. All six transgenic lines showed higher resistance phenotype compared with Honghuadajinyuan and a similar phenotype to Yanyan 97. (This figure is available in color at JXB online.)

Table 1.

Comparison of disease index and death ratio of different OE lines and the wild-type after inoculation with R. solanacearum

OE line7 dpi21 dpi
Disease index (%)Death ratio (%)Disease index (%)Death ratio (%)
Wild-type72.9727.9195.6486.05
OE-114.32**0.0021.84**6.80
OE-728.79**6.9842.73**12.79
OE-1934.76**7.3258.84**45.12
OE-3226.09**9.7834.51**11.96
OE-4327.60**7.7941.56**23.38
OE-4631.25**11.9654.62**30.43

**Highly significant difference. dpi, days post inoculation.

Comparison of disease index and death ratio of different OE lines and the wild-type after inoculation with R. solanacearum **Highly significant difference. dpi, days post inoculation. Overexpression of AhRLK1 increased resistance to Ralstonia solanacearum in transgenic tobacco. (A) Schematic representation of the pBI121-AhRLK1 construct. 2×35S Pro, two cauliflower mosaic virus 35S promoters; LB and RB, the left and right borders of the T-DNA; Kanr, kanamycin resistance; Nos-T, nos-terminator. (B) RT-PCR analysis of AhRLK1 expression in transgenic and wild-type tobacco plants; the expression level of NtActin was visualized as the endogenous control. (C) Third leaves of 8-week-old wild-type tobacco (CB-1, a medium susceptible cultivar) and AhRLK1-OE transgenic plants inoculated with a 10 µl suspension of 108 cfu ml−1 of a highly virulent R. solanacearum strain. Photos were obtained at 15 d post-inoculation (dpi). (D) Disease symptoms of detached leaves of wild-type and AhRLK1-OE transgenic plants after inoculation with R. solanacearum. Transgenic leaves showed immune resistance or the highly resistant phenotype. Photos were obtained at 7 and 15 dpi. (E) Overexpression of AhRLK1 in the hypersusceptible tobacco shows significantly enhanced resistance to Ralstonia solanacearum. Honghuadajinyuan is the hypersusceptible tobacco cultivar as transgenic host control; Yanyan 97 is a hyper-resistant tobacco cultivar as resistant control. OE-1, OE-7, OE-19, OE-32, OE-43, and OE-46 are different transgenic lines. Photos were obtained at 15 days post-inoculation (dpi) of plants after inoculation with R. solanacearum. All six transgenic lines showed higher resistance phenotype compared with Honghuadajinyuan and a similar phenotype to Yanyan 97. (This figure is available in color at JXB online.)

Specific marker genes were up-regulated in AhRLK1-transgenic tobacco in response to R. solanacearum

To confirm the role of AhRLK1 in plant disease resistance and to elucidate its possible molecular mechanism, we examined the transcriptional responses of defense-related genes, HR-responsive genes, and marker genes for SA, MeJA, and ET responses in AhRLK1-OE transgenic tobacco and wild-type CB-1 plants infected with R. solanacearum (Fig. 8). We found transcript levels of the HR-associated genes NtHIN1, NtHSR201, and NtHSR515 to be increased by 11.6-, 14.9-, and 5.1-fold, respectively, in the AhRLK1-OE-1 line compared wild-type plants. The HR-responsive genes NtH1N1, NtHSR201, NtHSR203, and NtHSR515 were significantly up-regulated in transgenic plants (P<0.01 or P<0.05) at 48 h after inoculation with R. solanacearum. In contrast, the transcripts level of these marker genes showed no significant change or a decrease in response to pathogen infection in wild-type plants (Fig. 8A). The expression levels of the SA-responsive genes NtPR2, NtPR3, and NtCHN50 significantly increased in the AhRLK1-OE-1 plants by 13.0-, 594.2- and 10.5-fold, respectively, and the expression of these genes was much higher in the AhRLK1-OE-1 plants compared with CB-1 when infected with the pathogen. However, NtRP4 expression was similar in the transgenic lines compared and wild-type after inoculation with the pathogen (Fig. 8B). MeJA-responsive genes NtLOX1, NtPR1b, and NtDEF1 were induced 4.3-, 19.0-, and 1.4-fold, respectively, in CB-1, but levels of the transcript of these genes were significantly increased in transgenic plants in response to the pathogen by 46.7-, 37.1-, and 7.3-fold, respectively (Fig. 8C). The transcript levels of the ET-responsive genes NtEFE26 and NtACS6 also increased significantly at 48 h after R. solanacearum infection in transgenic plants. In wild-type plants, the increment of NtEFE26 was less, and NtACS6 was down-regulated upon pathogen infection (Fig. 8D). Clearly, these results show that AhRLK1 overexpression enhances the expression of defense-related genes compared with wild-type tobacco. Specifically, the expression of most pathogen-inducible genes associated with HR and hormone defense signaling significantly increased in AhRLK1 overexpressing plants inoculated with R. solanacearum.
Fig. 8.

Transcript levels of the defense marker genes in transgenic or non-transgenic tobaccos and resistant and susceptible varieties after inoculation of R. solanacearum based on qPCR and microarray analysis. (A–E) The transcript levels of some defense marker genes of the 35S::AhRLK1 transgenic tobacco plants and the wild-type CB-1 by qRT-PCR. (A) NtHIN1, NtHSR201, NtHSR203, and NtHSR515 in HR signaling pathway. (B) NtPR2, NtPR3, NtPR4, and NtCHN50 in SA signaling pathway. (C) NtLOX1, NtPR1b, and NtDEF1 in MeJA signaling pathway. (D) NtEFE26 and NtACS6 in ET signaling pathway. (E) NtEDS1, NtPAD4, NtNDR1, and NtNPR1 in R-gene resistance signaling pathway. Transcript levels determined by qRT-PCR and normalized to NtEF1ɑ. The transcript levels of non-inoculated WT plants were used as the controls and assigned the value of 1. AhRLK-R. solanacearum and WT-R. solanacearum are transgenic or wild-type plants with inoculation of pathogen, respectively; AhRLK-Mock and WT-Mock are transgenic or wild-type without inoculation, respectively. (F) In silico analysis of marker gene expression in R gene signal with or without inoculation of pathogen in resistant Yueyou 97 and susceptible Honghuadajinyuan. FG622694 and TC104336 are two NDR1-like genes; FG156504 and TC79797 are NPR1/NIM1-like genes; TC108802 and FG133223 are PAD4 genes. RRS-R. solanacearum indicates hyper-resistant tobacco variety Yanyan 97 under inoculation; RRS-Mock indicates hyper-resistant variety Yanyan 97 without inoculation. SRS-R. solanacearum indicates hypersusceptible variety Honghuadajinyuan with inoculation; SRS-Mock indicates hypersusceptible variety Honghuadajinyuan without inoculation. The experiments were repeated three times with at least three independent repetitions of the biological experiments. Different letters indicate significant differences, as determined by Fisher’s protected LSD test (lowercase indicates P<0.05; uppercase indicates, P<0.01). Error bars indicate the standard error; data are means ±SE, n=3. (This figure is available in color at JXB online.)

Transcript levels of the defense marker genes in transgenic or non-transgenic tobaccos and resistant and susceptible varieties after inoculation of R. solanacearum based on qPCR and microarray analysis. (A–E) The transcript levels of some defense marker genes of the 35S::AhRLK1 transgenic tobacco plants and the wild-type CB-1 by qRT-PCR. (A) NtHIN1, NtHSR201, NtHSR203, and NtHSR515 in HR signaling pathway. (B) NtPR2, NtPR3, NtPR4, and NtCHN50 in SA signaling pathway. (C) NtLOX1, NtPR1b, and NtDEF1 in MeJA signaling pathway. (D) NtEFE26 and NtACS6 in ET signaling pathway. (E) NtEDS1, NtPAD4, NtNDR1, and NtNPR1 in R-gene resistance signaling pathway. Transcript levels determined by qRT-PCR and normalized to NtEF1ɑ. The transcript levels of non-inoculated WT plants were used as the controls and assigned the value of 1. AhRLK-R. solanacearum and WT-R. solanacearum are transgenic or wild-type plants with inoculation of pathogen, respectively; AhRLK-Mock and WT-Mock are transgenic or wild-type without inoculation, respectively. (F) In silico analysis of marker gene expression in R gene signal with or without inoculation of pathogen in resistant Yueyou 97 and susceptible Honghuadajinyuan. FG622694 and TC104336 are two NDR1-like genes; FG156504 and TC79797 are NPR1/NIM1-like genes; TC108802 and FG133223 are PAD4 genes. RRS-R. solanacearum indicates hyper-resistant tobacco variety Yanyan 97 under inoculation; RRS-Mock indicates hyper-resistant variety Yanyan 97 without inoculation. SRS-R. solanacearum indicates hypersusceptible variety Honghuadajinyuan with inoculation; SRS-Mock indicates hypersusceptible variety Honghuadajinyuan without inoculation. The experiments were repeated three times with at least three independent repetitions of the biological experiments. Different letters indicate significant differences, as determined by Fisher’s protected LSD test (lowercase indicates P<0.05; uppercase indicates, P<0.01). Error bars indicate the standard error; data are means ±SE, n=3. (This figure is available in color at JXB online.) To further characterize the increased resistance to R. solanacearum caused by AhRLK1 overexpression in transgenic tobacco, we examined the expression pattern of several marker genes in R-gene signaling (Fig. 8E). Compared with the wild-type, the transcripts of NtEDS1 and NtPAD4 were induced 37.5- and 57.2-fold, respectively, in the transgenic plants. In plants infected with R. solanacearum, the increments were more significant in transgenic plants compared with wild-type, showing 122.9- and 73.3-fold higher expression for NtEDS1 and NtPAD4, respectively. However, NtNDR1 expression was not affected by pathogen infection in transgenic plants, and NtNPR1 expression declined to levels lower than the wild-type controls. We also investigated the expression of these genes in the resistant cultivar Yanyan97 and the susceptible cultivar Honghuadajinyuan in response to R. solanacearum infection with microarray hybridization using non-amplified double stranded cDNA (Fig. 8F). The two NDR1 genes were down-regulation in resistant and susceptible varieties, whereas the transcripts of two PAD4 genes increased significantly in response to R. solanacearum infection. Nevertheless, NPR1-like genes were down-regulated in the susceptible variety and up-regulated in the resistant variety. Therefore, the overexpression of AhRLK1 in transgenic tobacco contributed to R. solanacearum resistance by altering the expression of a series of signaling pathways, in addition to employing the EDS1 pathway in R-gene signaling, and resistance against R. solanacearum in the wild-type plants was mediated by the EDS1 and NPR1 pathways.

Discussion

AhRLK1 characterized as CLAVATA1 participates in defense response to R. solanacearum

AhRLK1 was identified as a typical LRR-RLK family gene from peanut by microarray hybridization, where it showed an up-regulation response to a R. solanacearum challenge (Supplementary Dataset S1) (Torii ). The full length coding sequence of this gene was isolated by RACE, and it contained 12 conserved LRRs and a kinase domain. Phylogenetic analysis showed that it was similar to CLAVATA1, which is responsible for shoot and root meristem development and other functions (Clark , 1997; Williams and De Smet, 2013; Hanemian ; Laffont ). Microarray data showed that the three unigenes in the AhRLK1 family were expressed most strongly in stem and roots, and only traces were found in the embryo and pericarp (Fig. 4), suggesting that AhRLK1 may play a role in root and stem development (Alvarez ; Williams and De Smet, 2013; Hazak and Hardtke, 2016). Sequence alignment results showed high similarity with several known LRR-RLK genes, such as FLS2 identified from flg22-sensitive Arabidopsis mutants, which has receptor activity that can induce pathogen response (Gómez-Gómez and Boller, 2000; Gómez-Gómez ), and Xa21, a resistance gene in rice, which specifies the gene-for-gene resistance of rice against Xanthomonas oryzae (Song ; Wang ). ERECTA is another Arabidopsis LRR-RLK protein that enhances resistance to R. solanacearum (Godiard ). Real-time PCR results showed that AhRLK1 was up-regulated with time in response to R. solanacearum inoculation in Xinhuixiaoli, but its expression remained almost unchanged in Yueyou92. Therefore, AhRLK1 might not only function similarly to CLAVATA1 to regulate shoot meristem determination but may participate in the defense response to R. solanacearum infection. Interestingly, a recent study showed that Atclv1, a mutant of CLAVATA1, had increased resistance to R. solanacearum in Arabidopsis without CLV signaling modules (Hanemian ). This seems different from our finding that AhCLAVATA1 can increase resistance in response to R. solanacearum infection in tobacco.

AhRLK1 expression is associated with defense responses to bio/abiotic stresses

The LRR-RLK gene family participates widely in the regulation of plant growth and development, and also in the resistance to pathogens and environmental stresses (Clark ; Godiard ; Sun ; Wu ; Xu ; Hanemian ). Both AtCLV1 and AtCLV2 in Arabidopsis are involved in regulating meristem identity, and their mutants, clv1 and clv2, are resistant to bacterial pathogens. This increased resistance does not require CLV signaling modules involved in meristem homeostasis, and is not conditioned by defense-related hormones, such as SA, ethylene, and methyl jasmonate (Hanemian ). In peanut, we found that AhRLK1 responded differentially to R. solanacearum inoculation in resistant and susceptible varieties (Fig. 5G). AhRLK1 was up-regulated when plants were treated with hormones such as SA, ABA, ET, and MeJA, although the changes in expression pattern were slightly different depending on the hormone. However, the response patterns of transcripts to cold and drought stress were completely different (Fig. 5A–F). Clearly, the expression of peanut AhRLK1 is differentially affected by exposure to various hormones and environmental stresses. Both Arabidopsis and soybean CLV1 function as receptor subunits in the CLAVATA2–CORYNE (CRN) heterodimer complex, although, receptor-like protein kinase 2 is required for perception of CLEs, which are secreted from the nematodes Heterodera schachtii and Heterodera glycines (Guo ). The expression of AhRPK2 is induced at the feeding sites of nematodes on roots, and CLV1 mutants show increased resistance to the nematodes in soybean (Guo ). However, AhRLK1, the ortholog of Arabidopsis AtCLV1, may be widely involved in defense response against biotic stress and in shoot and root meristem homeostasis.

AhRLK1 confers resistance to bacterial wilt in transgenic tobacco

Here, transient expression and co-localization of AhRLK1::GFP fusion protein in N. benthamiana showed that AhRLK1 was localized to the plasma membrane and cell wall (Fig. 3; Supplementary Fig. S4). Overexpression of AhRLK1 in a medium-susceptible tobacco cultivar, CB-1, increase the resistance to bacterial wilt significantly. Furthermore, six different transgenic T2 homozygous lines were derived from the hypersusceptible tobacco cultivar Honghuadajinyuan and carrying an overexpression cassette of AhRLK1 increased resistant to R. solanacearum, albeit to different levels (Fig. 7E; Supplementary Figs S5, S7; Table 1). These lines demonstrated that overexpression of AhRLK1 could confer resistance to bacterial wilt in a heterologous crop. Transient overexpression of AhRLK1 in N. benthamiana suggested it was induced by a hypersensitive response, based on trypan blue staining and H2O2 accumulation, indicating that AhRLK1 expression could result in the cell death caused by a HR. Thus, ROS may be involved in the increased resistance driven by AhRLK1. However, the mechanism of AhRLK1 is apparently different from Atclv1, Atclv2, and Atcrn mutants, which are null alleles of different genes and show increased resistance through a decrease in miR169 accumulation (Hanemian ). Wild-type genotypes, including AtCLV1, AhCLV2, and CRN, demonstrate susceptible phenotypes (Hanemian ). In contrast, AhRLK1 is a functional gene. AhRLK1 expression was affected by hormone treatment, including ABA, ET, and SA, suggesting that AhRLK may confer resistance to R. solanacearum through these mechanisms, unlike AtCLV1 and AtCLV2, which increase resistance via changes in miR169 accumulation (Hanemian ). Therefore, our report is the first study showing that a peanut RLK is involved in resistance to R. solanacearum and can confer resistance in a heterologous crop.

AhRLK1 resistance is associated with the R gene and defense signaling in transgenic tobacco

A complex network of many defense signaling pathways is involved in plant–pathogen interactions, each of which is associated with certain marker genes (Divi ; Nahar ; Yang ; Vos ). Comparing AhRLK1-OE and wild-type tobacco variants infected with R. solanacearum using real-time PCR, marker genes NtHIN1, HSR201, and HSR515 of HR signaling (Sohn ) were significantly up-regulated in transgenic lines that were inoculated with the pathogen (Fig. 8A). This result was consistent with the phenotype of the transient overexpression of AhRLK1 in N. benthamiana, which led to the HR and cell death (Fig. 6A, B), indicating that the resistance to the pathogen employed HR signaling. Some pathogen-related genes involved in SA signaling, such as NtPR2, NtPR3, and NtCHN50, were highly up-regulated in overexpression lines of AhRLK1 (Dong, 1998; Glazebrook, 2005), suggesting that SA signaling is also associated with the resistance against pathogens through AhRLK1. The ET signaling marker genes NtACS6 and NtEFE26 and the MeJA signaling marker genes NtPR1b, NtDEF1, and NtLOX1 were all induced in AhRLK1 overexpression lines (Fig. 8). This result was consistent with those observed in peanut, where AhRLK1 was up-regulated by the exogenous applications of SA, ET, MeJA, and ABA. Based on these lines of evidence, the interplay of different hormone signals may be involved in the increased resistance of transgenic tobacco with peanut AhRLK1. In rice, XA21 is a receptor-like kinase that confers resistance against most strains of Xanthomonas oryzae pv. Oryzae (Xoo) (Song ). SA is required for XA21-mediated resistance to Xoo, and the resistance to Xoo decreases in Xa21/NahG plants, though it is not completely abolished (Lee ). However, Atclv1, Atclv2, and crn1 mutants of AtCLV1, AtCLV2, and CRN1, respectively, all show increased resistance to bacterial wilt, which does not require hormone signaling through the ABA, ET, MeJA, and SA pathways (Hanemian ). Therefore, the resistance against pathogens in peanuts mediated by AhRLK1 may be different from that of the orthologs Atclv1, Atclv2, and Atcrn1. As AhRLK1 is involved in meristem determination, the mechanism by which AhRLK1 interacts with multiple hormone pathways in fine-tuning immune responses in peanut requires further study. NDR1 and EDS1 are important regulators for R-gene-mediated resistance signaling in plants (Day ; Bhattacharjee ; Lu ). Usually, NDR1 is involved in pathogen resistance mediated by CC-NBS-LRR-type of R genes, and EDS1 and PAD4 are implicated in Tir-NBS-LRR resistance signaling (Aarts ; Wang ). However, RRS1-R, a Tir-NBS-LRR gene in Arabidopsis, and AhRRS5, a NBS-LRR gene in peanut, require NDR1 for the resistance phenotype (Deslandes , 2003; Zhang ). In this study, we compared the wild-type and AhRLK1 overexpression tobacco plants inoculated with R. solanacearum and found that NtEDS1 and NtPAD4 were significantly up-regulated in the AhRLK1 overexpression tobacco plants. However, NDR1 remained similar between wild-type and transgenic plants, and NPR1 was down-regulated in the transgenic plants infected with the pathogen (Fig. 8E). NPR1 is a key regulator of systemic acquired resistance and is essential for SA signal transduction to activate pathogen-related gene expression associated with R-gene resistance (Pieterse and Van Loon, 2004; Sandhu ; Xia ). Thus, the results indicated that AhRLK1 may be associated with the EDS1 pathway in the R-gene signal to regulate resistance against pathogens in transgenic tobacco, although NPR1 is likely not required for this resistance. For comparison, in silico hybridization with double strands of cDNA showed that the expression of two NDR1 genes declined in hyper-resistant non-transgenic Yanyan97 when infected with the pathogen. In contrast, NtPAD4 of the NtEDS1 pathway was up-regulated in response to pathogen infection, and this was consistent with the results from transgenic tobacco overexpressing AhRLK1. However, the two NPR1 genes were down-regulated in the hypersusceptible cultivar, and up-regulated in the hyper-resistant cultivar in response to pathogen infection. This result is consistent with the report that NPR1 mediated resistance to viral and bacterial pathogens, and that repressing NPR1 transcripts increases the susceptibility of plants to pathogens (Xiao and Chye, 2011; Li ). In contrast, in this study, with high resistance conferred to R. solanacearum by AhRLK1, NPR1 was down-regulated. Thus, we further suggest that AhRLK1 participated in pathogen resistance by employing the R-gene pathway in association with NtEDS1, but independent of NtNPR1.

Supplementary data

Supplementary data are available at JXB online. Dataset S1. Microarray data of AhRLK1 gene expression after R. solanacearum infection in Minhua 6. Dataset S2. Sequences of AhRLK1 full-length cDNA, genomic DNA, and protein. Dataset S3. Amino acid sequences of five homolog LRR-RLKs. Dataset S4. Thirty-five known functional Arabdopsis LRR-RLK proteins used for phylogenetic analysis. Dataset S5. In silico study of expression characteristics of three members in the AhRLK1 family in peanut. Fig. S1. Cloning of AhRLK1 from peanut. Electrophoresis photos represent 5′ RACE, 3′ RACE, and full-length cDNA PCR product of AhRLK1. Fig. S2. Multiple sequence alignment with known functional LRR receptor kinase proteins. Fig. S3. Phylogenetic tree constructed using AhRLK1 and 180 different subfamily LRR RLKs of Arabidopsis. Fig. S4. Co-localization of AhRLK1–GFP and CaSRC2-1–RFP and plasmolysis experiments of AhRLK1 protein subcellular localization. Fig. S5. Phenotype of AhRLK1-OE transgenic T1 lines and non-transgenic control plants in tobacco cultivar CB-1 after inoculation with R. solanacearum for 40 d. Fig. S6. Semi-quantitative PCR analysis of AhRLK1 expression in different overexpression tobacco lines of Honghuadajinyuan background. Fig. S7. Resistance phenotype of T2AhRLK1-OE transgenic homozygous lines and the control plants. Table S1. Primary primers used in this study. Table S2. Detailed data of disease indexes and death ratios of different OE lines and the wild-type after inoculation with Ralstonia solanacearum. Click here for additional data file.
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Journal:  Front Microbiol       Date:  2022-08-25       Impact factor: 6.064

3.  Comprehensive genome sequence analysis of the devastating tobacco bacterial phytopathogen Ralstonia solanacearum strain FJ1003.

Authors:  Kun Chen; Yuhui Zhuang; Lihui Wang; Huaqi Li; Taijie Lei; Mengke Li; Meijia Gao; Jiaxian Wei; Hao Dang; Ali Raza; Qiang Yang; Yasir Sharif; Huan Yang; Chong Zhang; Huasong Zou; Weijian Zhuang
Journal:  Front Genet       Date:  2022-08-22       Impact factor: 4.772

4.  Complete Genome Sequence Analysis of Ralstonia solanacearum Strain PeaFJ1 Provides Insights Into Its Strong Virulence in Peanut Plants.

Authors:  Xiaodan Tan; Xiaoqiu Dai; Ting Chen; Yushuang Wu; Dong Yang; Yixiong Zheng; Huilan Chen; Xiaorong Wan; Yong Yang
Journal:  Front Microbiol       Date:  2022-02-23       Impact factor: 5.640

  4 in total

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