Literature DB >> 31170015

A Review of Next-Generation Sequencing (NGS): Applications to the Diagnosis of Ocular Infectious Diseases.

Lina Ma1, Frederick A Jakobiec1, Thaddeus P Dryja1.   

Abstract

Purpose: To review the value of next-generation sequencing (NGS) in identifying the pathogens which cause ocular infections, thereby facilitating prompt initiation of treatment with an optimal anti-microbial regimen. Both contemporary and futuristic approaches to identifying pathogens in ocular infections are covered in this brief overview.
Methods: Review of the peer reviewed literature on conventional and advanced methods as applied to the diagnosis of infectious diseases of the eye.
Conclusion: NGS is a novel technology for identifying the pathogens responsible for ocular infections with the potential to improve the accuracy and speed of diagnosis and hastening the selection of the best therapy.

Entities:  

Keywords:  Next-generation sequencing (NGS); conjunctivitis; dacryocystitis; endophthalmitis; keratitis; microbial whole-genome sequencing (MWGS); ocular infection; review article; targeted Amplicon sequencing (TAS); uveitis

Mesh:

Substances:

Year:  2019        PMID: 31170015     DOI: 10.1080/08820538.2019.1620800

Source DB:  PubMed          Journal:  Semin Ophthalmol        ISSN: 0882-0538            Impact factor:   1.975


  6 in total

1.  Microbiological diagnosis of endophthalmitis using nanopore targeted sequencing.

Authors:  Qiong Huang; Aisi Fu; Yiyan Wang; Jie Zhang; Wanxu Zhao; Yang Cheng
Journal:  Clin Exp Ophthalmol       Date:  2021-09-15       Impact factor: 4.383

2.  Herpetic uveitis caused by herpes simplex virus after cataract surgery in a patient without prior viral keratitis or uveitis: a case report.

Authors:  Feng Hu; Wenxue Guan; Yongpeng Zhang; Xiaoyan Peng
Journal:  BMC Ophthalmol       Date:  2022-03-05       Impact factor: 2.209

Review 3.  Diagnostic armamentarium of infectious keratitis: A comprehensive review.

Authors:  Darren S J Ting; Bhavesh P Gopal; Rashmi Deshmukh; Gerami D Seitzman; Dalia G Said; Harminder S Dua
Journal:  Ocul Surf       Date:  2021-11-13       Impact factor: 5.033

Review 4.  Application of High-Throughput Sequencing Technology in Identifying the Pathogens in Endophthalmitis.

Authors:  Peini Cheng; Kui Dong; Zhiming Kang; Jing Li; Wenjuan Wang; Xiaodan Zhang; Guohong Zhou
Journal:  J Ophthalmol       Date:  2022-08-27       Impact factor: 1.974

Review 5.  Diagnostic methods for the etiological assessment of infectious corneal pathology (Review).

Authors:  Mihail Zemba; Otilia-Maria Dumitrescu; Andreea-Elena Dimirache; Daniel Constantin Branisteanu; Florian Balta; Marian Burcea; Andreea Dana Moraru; Sinziana Gradinaru
Journal:  Exp Ther Med       Date:  2021-12-13       Impact factor: 2.447

6.  Identifying Circular RNAs in HepG2 Expressing Genotype IV Swine Hepatitis E Virus ORF3 Via Whole Genome Sequencing.

Authors:  Hanwei Jiao; Yu Zhao; Zhixiong Zhou; Wenjie Li; Bowen Li; Guojing Gu; Yichen Luo; Xuehong Shuai; Cailiang Fan; Li Wu; Jixuan Chen; Qingzhou Huang; Fengyang Wang; Juan Liu
Journal:  Cell Transplant       Date:  2021 Jan-Dec       Impact factor: 4.064

  6 in total

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