Literature DB >> 3116499

Characterization of the small RNA of the bacteriophage phi 29 DNA packaging machine.

P X Guo1, S Bailey, J W Bodley, D Anderson.   

Abstract

The prohead connector of the bacteriophage luminal diameter 29 DNA packaging machine was reconstructed with the small RNA that regulates DNA packaging in vitro. The complete sequence of the 120 nucleotide RNA proved its origination from the promoter PE1(A1) of the left early region of phi 29 DNA, the end packaged first during assembly. The prohead RNA was clearly distinct from eubacterial 5S rRNA in sequence and composition.

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Year:  1987        PMID: 3116499      PMCID: PMC306194          DOI: 10.1093/nar/15.17.7081

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  27 in total

1.  RNA polymerase binding sites and transcription map of the DNA of Bacillus subtilis phage phi29.

Authors:  J M Sogo; M R Inciarte; J Corral; E Viñuela; M Salas
Journal:  J Mol Biol       Date:  1979-02-05       Impact factor: 5.469

2.  A small viral RNA is required for in vitro packaging of bacteriophage phi 29 DNA.

Authors:  P X Guo; S Erickson; D Anderson
Journal:  Science       Date:  1987-05-08       Impact factor: 47.728

3.  Direct chemical method for sequencing RNA.

Authors:  D A Peattie
Journal:  Proc Natl Acad Sci U S A       Date:  1979-04       Impact factor: 11.205

4.  The separation of DNA segments attached to proteins.

Authors:  C A Thomas; K Saigo; E McLeod; J Ito
Journal:  Anal Biochem       Date:  1979-02       Impact factor: 3.365

5.  Nucleotide sequence of 5S-ribosomal RNA from Escherichia coli.

Authors:  G G Brownlee; F Sanger; B G Barrell
Journal:  Nature       Date:  1967-08-12       Impact factor: 49.962

6.  Filter-binding assay for covalent DNA-protein complexes: adenovirus DNA-terminal protein complex.

Authors:  D H Coombs; G D Pearson
Journal:  Proc Natl Acad Sci U S A       Date:  1978-11       Impact factor: 11.205

7.  Analysis of gene function of bacteriophage phi 29 of Bacillus subtilis: identification of cistrons essential for viral assembly.

Authors:  E W Hagen; B E Reilly; M E Tosi; D L Anderson
Journal:  J Virol       Date:  1976-08       Impact factor: 5.103

8.  Mapping adenines, guanines, and pyrimidines in RNA.

Authors:  H Donis-Keller; A M Maxam; W Gilbert
Journal:  Nucleic Acids Res       Date:  1977-08       Impact factor: 16.971

9.  Transcription of the genome of bacteriophage phi 29: isolation and mapping of the major early mRNA synthesized in vivo and in vitro.

Authors:  F Kawamura; J Ito
Journal:  J Virol       Date:  1977-09       Impact factor: 5.103

10.  Assembly of Bacillus subtilis phage phi29. 1. Mutants in the cistrons coding for the structural proteins.

Authors:  A Camacho; F Jiménez; J De La Torre; J L Carrascosa; R P Mellado; C Vásquez; E Viñuela; M Salas
Journal:  Eur J Biochem       Date:  1977-02-15
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  36 in total

1.  Sequence requirement for hand-in-hand interaction in formation of RNA dimers and hexamers to gear phi29 DNA translocation motor.

Authors:  C Chen; C Zhang; P Guo
Journal:  RNA       Date:  1999-06       Impact factor: 4.942

2.  A computational approach to identify genes for functional RNAs in genomic sequences.

Authors:  R J Carter; I Dubchak; S R Holbrook
Journal:  Nucleic Acids Res       Date:  2001-10-01       Impact factor: 16.971

3.  Phi29 family of phages.

Authors:  W J Meijer; J A Horcajadas; M Salas
Journal:  Microbiol Mol Biol Rev       Date:  2001-06       Impact factor: 11.056

4.  Probing the structure of monomers and dimers of the bacterial virus phi29 hexamer RNA complex by chemical modification.

Authors:  M Trottier; Y Mat-Arip; C Zhang; C Chen; S Sheng; Z Shao; P Guo
Journal:  RNA       Date:  2000-09       Impact factor: 4.942

Review 5.  RNA nanotechnology: engineering, assembly and applications in detection, gene delivery and therapy.

Authors:  Peixuan Guo
Journal:  J Nanosci Nanotechnol       Date:  2005-12

6.  DNA packaging motor assembly intermediate of bacteriophage phi29.

Authors:  Jaya S Koti; Marc C Morais; Raj Rajagopal; Barbara A L Owen; Cynthia T McMurray; Dwight L Anderson
Journal:  J Mol Biol       Date:  2008-04-20       Impact factor: 5.469

7.  Nucleotide sequence and transcription of the right early region of bacteriophage PRD1.

Authors:  D Gerendasy; J Ito
Journal:  J Bacteriol       Date:  1990-04       Impact factor: 3.490

8.  Sequential action of six virus-encoded DNA-packaging RNAs during phage phi29 genomic DNA translocation.

Authors:  C Chen; P Guo
Journal:  J Virol       Date:  1997-05       Impact factor: 5.103

9.  Direct Sequencing of tRNA by 2D-HELS-AA MS Seq Reveals Its Different Isoforms and Dynamic Base Modifications.

Authors:  Ning Zhang; Shundi Shi; Xuanting Wang; Wenhao Ni; Xiaohong Yuan; Jiachen Duan; Tony Z Jia; Barney Yoo; Ashley Ziegler; James J Russo; Wenjia Li; Shenglong Zhang
Journal:  ACS Chem Biol       Date:  2020-05-19       Impact factor: 5.100

10.  Evaluation of end-capped DNA modules for pRNA capture and functionalization.

Authors:  Brian M Laing; Donald E Bergstrom
Journal:  Bioconjug Chem       Date:  2012-04-09       Impact factor: 4.774

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