Literature DB >> 31157863

Average Weighted Accuracy: Pragmatic Analysis for a Rapid Diagnostics in Categorizing Acute Lung Infections (RADICAL) Study.

Ying Liu1, Ephraim L Tsalik2,3, Yunyun Jiang4, Emily R Ko2, Christopher W Woods2,5, Ricardo Henao2, Scott R Evans4.   

Abstract

Patient management relies on diagnostic information to identify appropriate treatment. Standard evaluations of diagnostic tests consist of estimating sensitivity, specificity, positive/negative predictive values, likelihood ratios, and accuracy. Although useful, these metrics do not convey the tests' clinical value, which is critical to informing decision-making. Full appreciation of the clinical impact of a diagnostic test requires analyses that integrate sensitivity and specificity, account for the disease prevalence within the population of test application, and account for the relative importance of specificity vs sensitivity by considering the clinical implications of false-positive and false-negative results. We developed average weighted accuracy (AWA), representing a pragmatic metric of diagnostic yield or global utility of a diagnostic test. AWA can be used to compare test alternatives, even across different studies. We apply the AWA methodology to evaluate a new diagnostic test developed in the Rapid Diagnostics in Categorizing Acute Lung Infections (RADICAL) study.
© The Author(s) 2019. Published by Oxford University Press for the Infectious Diseases Society of America. All rights reserved. For permissions, e-mail: journals.permissions@oup.com.

Entities:  

Keywords:  average weighted accuracy (AWA); diagnostic test; diagnostic yield; prevalence; relative importance

Mesh:

Year:  2020        PMID: 31157863      PMCID: PMC7286373          DOI: 10.1093/cid/ciz437

Source DB:  PubMed          Journal:  Clin Infect Dis        ISSN: 1058-4838            Impact factor:   9.079


  10 in total

1.  Community-Acquired Pneumonia Requiring Hospitalization among U.S. Adults.

Authors:  Seema Jain; Wesley H Self; Richard G Wunderink; Sherene Fakhran; Robert Balk; Anna M Bramley; Carrie Reed; Carlos G Grijalva; Evan J Anderson; D Mark Courtney; James D Chappell; Chao Qi; Eric M Hart; Frank Carroll; Christopher Trabue; Helen K Donnelly; Derek J Williams; Yuwei Zhu; Sandra R Arnold; Krow Ampofo; Grant W Waterer; Min Levine; Stephen Lindstrom; Jonas M Winchell; Jacqueline M Katz; Dean Erdman; Eileen Schneider; Lauri A Hicks; Jonathan A McCullers; Andrew T Pavia; Kathryn M Edwards; Lyn Finelli
Journal:  N Engl J Med       Date:  2015-07-14       Impact factor: 91.245

2.  A historical perspective on clinical trials innovation and leadership: where have the academics gone?

Authors:  David L DeMets; Robert M Califf
Journal:  JAMA       Date:  2011-02-16       Impact factor: 56.272

3.  Medical research. Clinical trials get practical.

Authors:  Jennifer Couzin-Frankel
Journal:  Science       Date:  2015-04-24       Impact factor: 47.728

4.  Rapid Molecular Diagnostics to Inform Empiric Use of Ceftazidime/Avibactam and Ceftolozane/Tazobactam Against Pseudomonas aeruginosa: PRIMERS IV.

Authors:  Scott R Evans; Thuy Tien T Tran; Andrea M Hujer; Carol B Hill; Kristine M Hujer; Jose R Mediavilla; Claudia Manca; T Nicholas Domitrovic; Federico Perez; Michael Farmer; Kelsey M Pitzer; Brigid M Wilson; Barry N Kreiswirth; Robin Patel; Michael R Jacobs; Liang Chen; Vance G Fowler; Henry F Chambers; Robert A Bonomo
Journal:  Clin Infect Dis       Date:  2019-05-17       Impact factor: 9.079

5.  Benefit-risk Evaluation for Diagnostics: A Framework (BED-FRAME).

Authors:  Scott R Evans; Gene Pennello; Norberto Pantoja-Galicia; Hongyu Jiang; Andrea M Hujer; Kristine M Hujer; Claudia Manca; Carol Hill; Michael R Jacobs; Liang Chen; Robin Patel; Barry N Kreiswirth; Robert A Bonomo
Journal:  Clin Infect Dis       Date:  2016-05-18       Impact factor: 9.079

6.  A host-based RT-PCR gene expression signature to identify acute respiratory viral infection.

Authors:  Aimee K Zaas; Thomas Burke; Minhua Chen; Micah McClain; Bradly Nicholson; Timothy Veldman; Ephraim L Tsalik; Vance Fowler; Emanuel P Rivers; Ronny Otero; Stephen F Kingsmore; Deepak Voora; Joseph Lucas; Alfred O Hero; Lawrence Carin; Christopher W Woods; Geoffrey S Ginsburg
Journal:  Sci Transl Med       Date:  2013-09-18       Impact factor: 17.956

7.  Host gene expression classifiers diagnose acute respiratory illness etiology.

Authors:  Ephraim L Tsalik; Ricardo Henao; Marshall Nichols; Thomas Burke; Emily R Ko; Micah T McClain; Lori L Hudson; Anna Mazur; Debra H Freeman; Tim Veldman; Raymond J Langley; Eugenia B Quackenbush; Seth W Glickman; Charles B Cairns; Anja K Jaehne; Emanuel P Rivers; Ronny M Otero; Aimee K Zaas; Stephen F Kingsmore; Joseph Lucas; Vance G Fowler; Lawrence Carin; Geoffrey S Ginsburg; Christopher W Woods
Journal:  Sci Transl Med       Date:  2016-01-20       Impact factor: 17.956

8.  A novel host-proteome signature for distinguishing between acute bacterial and viral infections.

Authors:  Kfir Oved; Asi Cohen; Olga Boico; Roy Navon; Tom Friedman; Liat Etshtein; Or Kriger; Ellen Bamberger; Yura Fonar; Renata Yacobov; Ron Wolchinsky; Galit Denkberg; Yaniv Dotan; Amit Hochberg; Yoram Reiter; Moti Grupper; Isaac Srugo; Paul Feigin; Malka Gorfine; Irina Chistyakov; Ron Dagan; Adi Klein; Israel Potasman; Eran Eden
Journal:  PLoS One       Date:  2015-03-18       Impact factor: 3.240

9.  STARD 2015 guidelines for reporting diagnostic accuracy studies: explanation and elaboration.

Authors:  Jérémie F Cohen; Daniël A Korevaar; Douglas G Altman; David E Bruns; Constantine A Gatsonis; Lotty Hooft; Les Irwig; Deborah Levine; Johannes B Reitsma; Henrica C W de Vet; Patrick M M Bossuyt
Journal:  BMJ Open       Date:  2016-11-14       Impact factor: 2.692

10.  Procalcitonin as a Marker of Etiology in Adults Hospitalized With Community-Acquired Pneumonia.

Authors:  Wesley H Self; Robert A Balk; Carlos G Grijalva; Derek J Williams; Yuwei Zhu; Evan J Anderson; Grant W Waterer; D Mark Courtney; Anna M Bramley; Christopher Trabue; Sherene Fakhran; Anne J Blaschke; Seema Jain; Kathryn M Edwards; Richard G Wunderink
Journal:  Clin Infect Dis       Date:  2017-07-15       Impact factor: 9.079

  10 in total
  3 in total

1.  Comparing the Diagnostic Accuracy of Clinician Judgment to a Novel Host Response Diagnostic for Acute Respiratory Illness.

Authors:  Ian S Jaffe; Anja K Jaehne; Eugenia Quackenbush; Emily R Ko; Emanuel P Rivers; Micah T McClain; Geoffrey S Ginsburg; Christopher W Woods; Ephraim L Tsalik
Journal:  Open Forum Infect Dis       Date:  2021-11-10       Impact factor: 3.835

2.  A Statistical Review: Why Average Weighted Accuracy, not Accuracy or AUC?

Authors:  Yunyun Jiang; Qing Pan; Ying Liu; Scott Evans
Journal:  Biostat Epidemiol       Date:  2021-09-27

3.  Validation of a host response test to distinguish bacterial and viral respiratory infection.

Authors:  Emily C Lydon; Ricardo Henao; Thomas W Burke; Mert Aydin; Bradly P Nicholson; Seth W Glickman; Vance G Fowler; Eugenia B Quackenbush; Charles B Cairns; Stephen F Kingsmore; Anja K Jaehne; Emanuel P Rivers; Raymond J Langley; Elizabeth Petzold; Emily R Ko; Micah T McClain; Geoffrey S Ginsburg; Christopher W Woods; Ephraim L Tsalik
Journal:  EBioMedicine       Date:  2019-10-17       Impact factor: 8.143

  3 in total

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