Literature DB >> 31155311

MxB Restricts HIV-1 by Targeting the Tri-hexamer Interface of the Viral Capsid.

Sarah Sierra Smaga1, Chaoyi Xu2, Brady James Summers1, Katherine Marie Digianantonio1, Juan R Perilla2, Yong Xiong3.   

Abstract

The human antiviral protein MxB is a restriction factor that fights HIV infection. Previous experiments have demonstrated that MxB targets the HIV capsid, a protein shell that protects the viral genome. To make the conical-shaped capsid, HIV CA proteins are organized into a lattice composed of hexamer and pentamer building blocks, providing many interfaces for host proteins to recognize. Through extensive biochemical and biophysical studies and molecular dynamics simulations, we show that MxB is targeting the HIV capsid by recognizing the region created at the intersection of three CA hexamers. We are further able to map this interaction to a few CA residues, located in a negatively charged well at the interface between the three CA hexamers. This work provides detailed residue-level mapping of the targeted capsid interface and how MxB interacts. This information could inspire the development of capsid-targeting therapies for HIV. Published by Elsevier Ltd.

Entities:  

Keywords:  HIV; MxB; capsid; molecular dynamics; pattern-sensing; simulation

Year:  2019        PMID: 31155311      PMCID: PMC7183857          DOI: 10.1016/j.str.2019.04.015

Source DB:  PubMed          Journal:  Structure        ISSN: 0969-2126            Impact factor:   5.006


  55 in total

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2.  Specific recognition and accelerated uncoating of retroviral capsids by the TRIM5alpha restriction factor.

Authors:  Matthew Stremlau; Michel Perron; Mark Lee; Yuan Li; Byeongwoon Song; Hassan Javanbakht; Felipe Diaz-Griffero; Donovan J Anderson; Wesley I Sundquist; Joseph Sodroski
Journal:  Proc Natl Acad Sci U S A       Date:  2006-03-15       Impact factor: 11.205

3.  Human MxB Protein Is a Pan-herpesvirus Restriction Factor.

Authors:  Mirjam Schilling; Lorenzo Bulli; Sebastian Weigang; Laura Graf; Sebastian Naumann; Corinna Patzina; Valentina Wagner; Liane Bauersfeld; Caroline Goujon; Hartmut Hengel; Anne Halenius; Zsolt Ruzsics; Torsten Schaller; Georg Kochs
Journal:  J Virol       Date:  2018-08-16       Impact factor: 5.103

4.  VMD: visual molecular dynamics.

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6.  XDS.

Authors:  Wolfgang Kabsch
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2010-01-22

7.  STRUCTURAL VIROLOGY. Conformational plasticity of a native retroviral capsid revealed by x-ray crystallography.

Authors:  G Obal; F Trajtenberg; F Carrión; L Tomé; N Larrieux; X Zhang; O Pritsch; A Buschiazzo
Journal:  Science       Date:  2015-06-04       Impact factor: 47.728

8.  Flexible use of nuclear import pathways by HIV-1.

Authors:  KyeongEun Lee; Zandrea Ambrose; Thomas D Martin; Ilker Oztop; Alok Mulky; John G Julias; Nick Vandegraaff; Joerg G Baumann; Rui Wang; Wendy Yuen; Taichiro Takemura; Kenneth Shelton; Ichiro Taniuchi; Yuan Li; Joseph Sodroski; Dan R Littman; John M Coffin; Stephen H Hughes; Derya Unutmaz; Alan Engelman; Vineet N KewalRamani
Journal:  Cell Host Microbe       Date:  2010-03-18       Impact factor: 21.023

9.  MXB inhibits murine cytomegalovirus.

Authors:  Ananda Ayyappan Jaguva Vasudevan; Ariane Bähr; Ramona Grothmann; Anna Singer; Dieter Häussinger; Albert Zimmermann; Carsten Münk
Journal:  Virology       Date:  2018-07-19       Impact factor: 3.616

10.  PHENIX: a comprehensive Python-based system for macromolecular structure solution.

Authors:  Paul D Adams; Pavel V Afonine; Gábor Bunkóczi; Vincent B Chen; Ian W Davis; Nathaniel Echols; Jeffrey J Headd; Li-Wei Hung; Gary J Kapral; Ralf W Grosse-Kunstleve; Airlie J McCoy; Nigel W Moriarty; Robert Oeffner; Randy J Read; David C Richardson; Jane S Richardson; Thomas C Terwilliger; Peter H Zwart
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2010-01-22
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  23 in total

1.  FEZ1 Is Recruited to a Conserved Cofactor Site on Capsid to Promote HIV-1 Trafficking.

Authors:  Pei-Tzu Huang; Brady James Summers; Chaoyi Xu; Juan R Perilla; Viacheslav Malikov; Mojgan H Naghavi; Yong Xiong
Journal:  Cell Rep       Date:  2019-08-14       Impact factor: 9.423

2.  Recognition of HIV-1 capsid by PQBP1 licenses an innate immune sensing of nascent HIV-1 DNA.

Authors:  Sunnie M Yoh; João I Mamede; Derrick Lau; Narae Ahn; Maria T Sánchez-Aparicio; Joshua Temple; Andrew Tuckwell; Nina V Fuchs; Gianguido C Cianci; Laura Riva; Heather Curry; Xin Yin; Stéphanie Gambut; Lacy M Simons; Judd F Hultquist; Renate König; Yong Xiong; Adolfo García-Sastre; Till Böcking; Thomas J Hope; Sumit K Chanda
Journal:  Mol Cell       Date:  2022-07-08       Impact factor: 19.328

Review 3.  Updating on Roles of HIV Intrinsic Factors: A Review of Their Antiviral Mechanisms and Emerging Functions.

Authors:  Sudarat Hadpech; Sutpirat Moonmuang; Koollawat Chupradit; Umpa Yasamut; Chatchai Tayapiwatana
Journal:  Intervirology       Date:  2021-08-31       Impact factor: 2.294

4.  HIV-1 mutants that escape the cytotoxic T-lymphocytes are defective in viral DNA integration.

Authors:  Muthukumar Balasubramaniam; Benem-Orom Davids; Alex Bryer; Chaoyi Xu; Santosh Thapa; Jiong Shi; Christopher Aiken; Jui Pandhare; Juan R Perilla; Chandravanu Dash
Journal:  PNAS Nexus       Date:  2022-05-20

Review 5.  Visualizing HIV-1 Capsid and Its Interactions with Antivirals and Host Factors.

Authors:  Morganne Wilbourne; Peijun Zhang
Journal:  Viruses       Date:  2021-02-04       Impact factor: 5.818

Review 6.  Integrative structural biology of HIV-1 capsid protein assemblies: combining experiment and computation.

Authors:  Juan R Perilla; Jodi A Hadden-Perilla; Angela M Gronenborn; Tatyana Polenova
Journal:  Curr Opin Virol       Date:  2021-04-23       Impact factor: 7.121

7.  The interferon-inducible GTPase MxB promotes capsid disassembly and genome release of herpesviruses.

Authors:  Manutea C Serrero; Virginie Girault; Sebastian Weigang; Todd M Greco; Ana Ramos-Nascimento; Fenja Anderson; Antonio Piras; Ana Hickford Martinez; Jonny Hertzog; Anne Binz; Anja Pohlmann; Ute Prank; Jan Rehwinkel; Rudolf Bauerfeind; Ileana M Cristea; Andreas Pichlmair; Georg Kochs; Beate Sodeik
Journal:  Elife       Date:  2022-04-27       Impact factor: 8.713

8.  MxB sensitivity of HIV-1 is determined by a highly variable and dynamic capsid surface.

Authors:  Richard J Miles; Claire Kerridge; Laura Hilditch; Christopher Monit; David A Jacques; Greg J Towers
Journal:  Elife       Date:  2020-06-17       Impact factor: 8.140

9.  Effect of Different Nuclear Localization Signals on the Subcellular Localization and Anti-HIV-1 Function of the MxB Protein.

Authors:  Keli Chai; Zhen Wang; Qinghua Pan; Juan Tan; Wentao Qiao; Chen Liang
Journal:  Front Microbiol       Date:  2021-05-20       Impact factor: 5.640

10.  Intrinsic curvature of the HIV-1 CA hexamer underlies capsid topology and interaction with cyclophilin A.

Authors:  Tao Ni; Samuel Gerard; Gongpu Zhao; Kyle Dent; Jiying Ning; Jing Zhou; Jiong Shi; Jordan Anderson-Daniels; Wen Li; Sooin Jang; Alan N Engelman; Christopher Aiken; Peijun Zhang
Journal:  Nat Struct Mol Biol       Date:  2020-08-03       Impact factor: 15.369

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