Literature DB >> 31152406

SwissPalm 2: Protein S-Palmitoylation Database.

Mathieu Blanc1, Fabrice P A David2, F Gisou van der Goot3.   

Abstract

Protein S-palmitoylation is increasingly recognized as an important posttranslational modification, present in all eukaryotic organisms, involved in the regulation of many biological processes. The SwissPalm database centralizes the large and increasing number of published palmitoyl-proteome datasets, provides tools to compare them, and includes curated data from the literature on the identification and analysis of palmitoylated proteins. SwissPalm 2 provides an updated version, with 38 palmitoyl-proteomes at the time of release, from 17 different species, and new features such as the inclusion of orthologs.

Keywords:  Confidence; DHHC; Database; Palmitoyl-proteomes; Palmitoylation; Posttranslational modification; Proteomics; S-acylation

Mesh:

Substances:

Year:  2019        PMID: 31152406     DOI: 10.1007/978-1-4939-9532-5_16

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  23 in total

1.  Proteome-wide identification of palmitoylated proteins in mouse testis.

Authors:  Jun Gao; Wenchao Li; Zhongjian Zhang; Wenshan Gao; Eryan Kong
Journal:  Reprod Sci       Date:  2022-04-27       Impact factor: 2.924

2.  ZDHHC22-mediated mTOR palmitoylation restrains breast cancer growth and endocrine therapy resistance.

Authors:  Jiefeng Huang; Jie Li; Jun Tang; Yushen Wu; Fengsheng Dai; Ziying Yi; Yan Wang; Yunhai Li; Yue Wu; Guosheng Ren; Tingxiu Xiang
Journal:  Int J Biol Sci       Date:  2022-04-04       Impact factor: 10.750

Review 3.  Regulation of Dynamic Protein S-Acylation.

Authors:  Jessica J Chen; Ying Fan; Darren Boehning
Journal:  Front Mol Biosci       Date:  2021-04-26

4.  S-acylation of Orai1 regulates store-operated Ca2+ entry.

Authors:  Savannah J West; Goutham Kodakandla; Qioachu Wang; Ritika Tewari; Michael X Zhu; Darren Boehning; Askar M Akimzhanov
Journal:  J Cell Sci       Date:  2021-06-22       Impact factor: 5.235

5.  Protein acylation by saturated very long chain fatty acids and endocytosis are involved in necroptosis.

Authors:  Apoorva J Pradhan; Daniel Lu; Laura R Parisi; Shichen Shen; Ilyas A Berhane; Samuel L Galster; Kiana Bynum; Viviana Monje-Galvan; Omer Gokcumen; Sherry R Chemler; Jun Qu; Jason G Kay; G Ekin Atilla-Gokcumen
Journal:  Cell Chem Biol       Date:  2021-04-12       Impact factor: 9.039

6.  Global identification of S-palmitoylated proteins and detection of palmitoylating (DHHC) enzymes in heart.

Authors:  Madeleine R Miles; John Seo; Min Jiang; Zachary T Wilson; Janay Little; Jon Hao; Joshua Andrade; Beatrix Ueberheide; Gea-Ny Tseng
Journal:  J Mol Cell Cardiol       Date:  2021-02-23       Impact factor: 5.763

7.  The linker domain of the SNARE protein SNAP25 acts as a flexible molecular spacer that ensures efficient S-acylation.

Authors:  Christine Salaun; Jennifer Greaves; Nicholas C O Tomkinson; Luke H Chamberlain
Journal:  J Biol Chem       Date:  2020-04-21       Impact factor: 5.157

Review 8.  Human carbonic anhydrases and post-translational modifications: a hidden world possibly affecting protein properties and functions.

Authors:  Anna Di Fiore; Claudiu T Supuran; Andrea Scaloni; Giuseppina De Simone
Journal:  J Enzyme Inhib Med Chem       Date:  2020-12       Impact factor: 5.051

9.  Proteomic Analysis of Lipid Rafts from RBL-2H3 Mast Cells.

Authors:  Edismauro Garcia Freitas Filho; Luiz Augusto Marin Jaca; Lilian Cristiane Baeza; Célia Maria de Almeida Soares; Clayton Luiz Borges; Constance Oliver; Maria Célia Jamur
Journal:  Int J Mol Sci       Date:  2019-08-11       Impact factor: 5.923

10.  Palmitoylated acyl protein thioesterase APT2 deforms membranes to extract substrate acyl chains.

Authors:  Laurence Abrami; Martina Audagnotto; Sylvia Ho; Maria Jose Marcaida; Francisco S Mesquita; Muhammad U Anwar; Patrick A Sandoz; Giulia Fonti; Florence Pojer; Matteo Dal Peraro; F Gisou van der Goot
Journal:  Nat Chem Biol       Date:  2021-03-11       Impact factor: 15.040

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