Literature DB >> 31152401

Global Profiling of Sirtuin Deacylase Substrates Using a Chemical Proteomic Strategy and Validation by Fluorescent Labeling.

Shuai Zhang1, Nicole A Spiegelman1, Hening Lin2.   

Abstract

Protein fatty-acylation is an important posttranslational modification (PTM) and has been associated with many fundamental biological processes. Sirtuins, the nicotinamide adenine dinucleotide (NAD)-dependent class of histone deacetylases have been reported to possess lysine defatty-acylase activity. Comprehensive substrate profiling of sirtuins will help to establish the function of both protein lysine fatty acylation and its regulation by sirtuins. Here, we describe a chemical proteomic strategy to globally profile sirtuin defatty-acylation substrates and a fluorescent labeling method to validate sirtuin substrates.

Entities:  

Keywords:  Fluorescent labeling; Protein fatty acylation; Proteomic profiling; SILAC; Sirtuin substrates

Mesh:

Substances:

Year:  2019        PMID: 31152401      PMCID: PMC6893875          DOI: 10.1007/978-1-4939-9532-5_11

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  14 in total

1.  Nε-Fatty acylation of Rho GTPases by a MARTX toxin effector.

Authors:  Yan Zhou; Chunfeng Huang; Li Yin; Muyang Wan; Xiaofei Wang; Lin Li; Yanhua Liu; Zhao Wang; Panhan Fu; Ni Zhang; She Chen; Xiaoyun Liu; Feng Shao; Yongqun Zhu
Journal:  Science       Date:  2017-10-27       Impact factor: 47.728

2.  Protein Lipidation: Occurrence, Mechanisms, Biological Functions, and Enabling Technologies.

Authors:  Hong Jiang; Xiaoyu Zhang; Xiao Chen; Pornpun Aramsangtienchai; Zhen Tong; Hening Lin
Journal:  Chem Rev       Date:  2018-01-02       Impact factor: 60.622

3.  SIRT7 Is an RNA-Activated Protein Lysine Deacylase.

Authors:  Zhen Tong; Miao Wang; Yi Wang; David D Kim; Jennifer K Grenier; Ji Cao; Sushabhan Sadhukhan; Quan Hao; Hening Lin
Journal:  ACS Chem Biol       Date:  2016-12-20       Impact factor: 5.100

4.  Novel fatty acid acylation of lens integral membrane protein aquaporin-0.

Authors:  Kevin L Schey; Danielle B Gutierrez; Zhen Wang; Junhua Wei; Angus C Grey
Journal:  Biochemistry       Date:  2010-10-25       Impact factor: 3.162

5.  Robust fluorescent detection of protein fatty-acylation with chemical reporters.

Authors:  Guillaume Charron; Mingzi M Zhang; Jacob S Yount; John Wilson; Anuradha S Raghavan; Eliah Shamir; Howard C Hang
Journal:  J Am Chem Soc       Date:  2009-04-08       Impact factor: 15.419

6.  HDAC8 Catalyzes the Hydrolysis of Long Chain Fatty Acyl Lysine.

Authors:  Pornpun Aramsangtienchai; Nicole A Spiegelman; Bin He; Seth P Miller; Lunzhi Dai; Yingming Zhao; Hening Lin
Journal:  ACS Chem Biol       Date:  2016-08-05       Impact factor: 5.100

7.  Myristyl acylation of the tumor necrosis factor alpha precursor on specific lysine residues.

Authors:  F T Stevenson; S L Bursten; R M Locksley; D H Lovett
Journal:  J Exp Med       Date:  1992-10-01       Impact factor: 14.307

Review 8.  Global profiling of protein lipidation using chemical proteomic technologies.

Authors:  Edward W Tate; Karunakaran A Kalesh; Thomas Lanyon-Hogg; Elisabeth M Storck; Emmanuelle Thinon
Journal:  Curr Opin Chem Biol       Date:  2014-11-15       Impact factor: 8.822

9.  Efficient demyristoylase activity of SIRT2 revealed by kinetic and structural studies.

Authors:  Yan-Bin Teng; Hui Jing; Pornpun Aramsangtienchai; Bin He; Saba Khan; Jing Hu; Hening Lin; Quan Hao
Journal:  Sci Rep       Date:  2015-02-23       Impact factor: 4.379

10.  SIRT6 regulates Ras-related protein R-Ras2 by lysine defatty-acylation.

Authors:  Xiaoyu Zhang; Nicole A Spiegelman; Ornella D Nelson; Hui Jing; Hening Lin
Journal:  Elife       Date:  2017-04-13       Impact factor: 8.140

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