Literature DB >> 31150626

Nucleoid Size Scaling and Intracellular Organization of Translation across Bacteria.

William T Gray1, Sander K Govers2, Yingjie Xiang3, Bradley R Parry2, Manuel Campos2, Sangjin Kim3, Christine Jacobs-Wagner4.   

Abstract

The scaling of organelles with cell size is thought to be exclusive to eukaryotes. Here, we demonstrate that similar scaling relationships hold for the bacterial nucleoid. Despite the absence of a nuclear membrane, nucleoid size strongly correlates with cell size, independent of changes in DNA amount and across various nutrient conditions. This correlation is observed in diverse bacteria, revealing a near-constant ratio between nucleoid and cell size for a given species. As in eukaryotes, the nucleocytoplasmic ratio in bacteria varies greatly among species. This spectrum of nucleocytoplasmic ratios is independent of genome size, and instead it appears linked to the average population cell size. Bacteria with different nucleocytoplasmic ratios have a cytoplasm with different biophysical properties, impacting ribosome mobility and localization. Together, our findings identify new organizational principles and biophysical features of bacterial cells, implicating the nucleocytoplasmic ratio and cell size as determinants of the intracellular organization of translation.
Copyright © 2019 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  cell size; intracellular organization; nucleocytoplasmic ratio; nucleoid; ribosome mobility; scaling properties

Mesh:

Substances:

Year:  2019        PMID: 31150626      PMCID: PMC6629263          DOI: 10.1016/j.cell.2019.05.017

Source DB:  PubMed          Journal:  Cell        ISSN: 0092-8674            Impact factor:   41.582


  114 in total

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Review 2.  Mechanisms of intracellular scaling.

Authors:  Daniel L Levy; Rebecca Heald
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Review 3.  Sizing and shaping the nucleus: mechanisms and significance.

Authors:  Predrag Jevtić; Lisa J Edens; Lidija D Vuković; Daniel L Levy
Journal:  Curr Opin Cell Biol       Date:  2014-02-04       Impact factor: 8.382

4.  Effect of cellular filamentation on adventurous and social gliding motility of Myxococcus xanthus.

Authors:  H Sun; Z Yang; W Shi
Journal:  Proc Natl Acad Sci U S A       Date:  1999-12-21       Impact factor: 11.205

5.  The Synchronization of Replication and Division Cycles in Individual E. coli Cells.

Authors:  Mats Wallden; David Fange; Ebba Gregorsson Lundius; Özden Baltekin; Johan Elf
Journal:  Cell       Date:  2016-07-28       Impact factor: 41.582

6.  SeqA: a negative modulator of replication initiation in E. coli.

Authors:  M Lu; J L Campbell; E Boye; N Kleckner
Journal:  Cell       Date:  1994-05-06       Impact factor: 41.582

7.  Identification of a sex-factor-affinity site in E. coli as gamma delta.

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Journal:  Cold Spring Harb Symp Quant Biol       Date:  1981

8.  Carboxyl-proximal regions of reovirus nonstructural protein muNS necessary and sufficient for forming factory-like inclusions.

Authors:  Teresa J Broering; Michelle M Arnold; Cathy L Miller; Jessica A Hurt; Patricia L Joyce; Max L Nibert
Journal:  J Virol       Date:  2005-05       Impact factor: 5.103

9.  Cell-size control and homeostasis in bacteria.

Authors:  Sattar Taheri-Araghi; Serena Bradde; John T Sauls; Norbert S Hill; Petra A Levin; Johan Paulsson; Massimo Vergassola; Suckjoon Jun
Journal:  Curr Biol       Date:  2014-12-24       Impact factor: 10.834

10.  A comprehensive set of plasmids for vanillate- and xylose-inducible gene expression in Caulobacter crescentus.

Authors:  Martin Thanbichler; Antonio A Iniesta; Lucy Shapiro
Journal:  Nucleic Acids Res       Date:  2007-10-24       Impact factor: 16.971

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  24 in total

1.  General quantitative relations linking cell growth and the cell cycle in Escherichia coli.

Authors:  Hai Zheng; Yang Bai; Meiling Jiang; Taku A Tokuyasu; Xiongliang Huang; Fajun Zhong; Yuqian Wu; Xiongfei Fu; Nancy Kleckner; Terence Hwa; Chenli Liu
Journal:  Nat Microbiol       Date:  2020-05-18       Impact factor: 17.745

Review 2.  Bacterial Vivisection: How Fluorescence-Based Imaging Techniques Shed a Light on the Inner Workings of Bacteria.

Authors:  Alexander Cambré; Abram Aertsen
Journal:  Microbiol Mol Biol Rev       Date:  2020-10-28       Impact factor: 11.056

3.  BR-Bodies Provide Selectively Permeable Condensates that Stimulate mRNA Decay and Prevent Release of Decay Intermediates.

Authors:  Nadra Al-Husini; Dylan T Tomares; Zechariah J Pfaffenberger; Nisansala S Muthunayake; Mohammad A Samad; Tiancheng Zuo; Obaidah Bitar; James R Aretakis; Mohammed-Husain M Bharmal; Alisa Gega; Julie S Biteen; W Seth Childers; Jared M Schrader
Journal:  Mol Cell       Date:  2020-04-27       Impact factor: 17.970

4.  Long-term effects of the proline-rich antimicrobial peptide Oncocin112 on the Escherichia coli translation machinery.

Authors:  Yanyu Zhu; James C Weisshaar; Mainak Mustafi
Journal:  J Biol Chem       Date:  2020-07-28       Impact factor: 5.157

5.  Steric interactions and out-of-equilibrium processes control the internal organization of bacteria.

Authors:  A Movilla Miangolarra; Sophia Hsin-Jung Li; Jean-François Joanny; Ned S Wingreen; Michele Castellana
Journal:  Proc Natl Acad Sci U S A       Date:  2021-10-26       Impact factor: 11.205

Review 6.  Bacterial transcription during growth arrest.

Authors:  Megan Bergkessel
Journal:  Transcription       Date:  2021-09-06

7.  The effects of polydisperse crowders on the compaction of the Escherichia coli nucleoid.

Authors:  Da Yang; Jaana Männik; Scott T Retterer; Jaan Männik
Journal:  Mol Microbiol       Date:  2020-02-05       Impact factor: 3.501

8.  Bacterial cell proliferation: from molecules to cells.

Authors:  Alix Meunier; François Cornet; Manuel Campos
Journal:  FEMS Microbiol Rev       Date:  2021-01-08       Impact factor: 16.408

Review 9.  Relevance and Regulation of Cell Density.

Authors:  Gabriel E Neurohr; Angelika Amon
Journal:  Trends Cell Biol       Date:  2020-01-21       Impact factor: 20.808

10.  Temporal compartmentalization of viral infection in bacterial cells.

Authors:  Audrey Labarde; Lina Jakutyte; Cyrille Billaudeau; Beatrix Fauler; Maria López-Sanz; Prishila Ponien; Eric Jacquet; Thorsten Mielke; Silvia Ayora; Rut Carballido-López; Paulo Tavares
Journal:  Proc Natl Acad Sci U S A       Date:  2021-07-13       Impact factor: 11.205

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