Literature DB >> 31150215

Photochemical Characterization of a New Heliorhodopsin from the Gram-Negative Eubacterium Bellilinea caldifistulae (BcHeR) and Comparison with Heliorhodopsin-48C12.

Atsushi Shibukawa1, Keiichi Kojima1, Yu Nakajima2, Yosuke Nishimura2, Susumu Yoshizawa2,3, Yuki Sudo1.   

Abstract

Many microorganisms express rhodopsins, pigmented membrane proteins capable of absorbing sunlight and harnessing that energy for important biological functions such as ATP synthesis and phototaxis. Microbial rhodopsins that have been discovered to date are categorized as type-1 rhodopsins. Interestingly, researchers have very recently unveiled a new microbial rhodopsin family named the heliorhodopsins, which are phylogenetically distant from type-1 rhodopsins. Among them, only heliorhodopsin-48C12 (HeR-48C12) from a Gram-positive eubacterium has been photochemically characterized [Pushkarev, A., et al. (2018) Nature 558, 595-599]. In this study, we photochemically characterize a purple-colored heliorhodopsin from Gram-negative eubacterium Bellilinea caldifistulae (BcHeR) as a second example and identify which properties are or are not conserved between BcHeR and HeR-48C12. A series of photochemical measurements revealed several conserved properties between them, including a visible absorption spectrum with a maximum at around 550 nm, the lack of ion-transport activity, and the existence of a second-order O-like intermediate during the photocycle that may activate an unidentified biological function. In contrast, as a property that is not conserved, although HeR-48C12 shows the light adaptation state of retinal, BcHeR showed the same retinal configuration under both dark- and light-adapted conditions. These comparisons of photochemical properties between BcHeR and HeR-48C12 are an important first step toward understanding the nature and functional role of heliorhodopsins.

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Year:  2019        PMID: 31150215     DOI: 10.1021/acs.biochem.9b00257

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  5 in total

1.  Microbial Rhodopsins.

Authors:  Valentin Gordeliy; Kirill Kovalev; Ernst Bamberg; Francisco Rodriguez-Valera; Egor Zinovev; Dmitrii Zabelskii; Alexey Alekseev; Riccardo Rosselli; Ivan Gushchin; Ivan Okhrimenko
Journal:  Methods Mol Biol       Date:  2022

2.  Lokiarchaeota archaeon schizorhodopsin-2 (LaSzR2) is an inward proton pump displaying a characteristic feature of acid-induced spectral blue-shift.

Authors:  Keiichi Kojima; Susumu Yoshizawa; Masumi Hasegawa; Masaki Nakama; Marie Kurihara; Takashi Kikukawa; Yuki Sudo
Journal:  Sci Rep       Date:  2020-11-30       Impact factor: 4.379

3.  Color-tuning of natural variants of heliorhodopsin.

Authors:  Se-Hwan Kim; Kimleng Chuon; Shin-Gyu Cho; Ahreum Choi; Seanghun Meas; Hyun-Suk Cho; Kwang-Hwan Jung
Journal:  Sci Rep       Date:  2021-01-13       Impact factor: 4.379

4.  Earliest Photic Zone Niches Probed by Ancestral Microbial Rhodopsins.

Authors:  Cathryn D Sephus; Evrim Fer; Amanda K Garcia; Zachary R Adam; Edward W Schwieterman; Betul Kacar
Journal:  Mol Biol Evol       Date:  2022-05-03       Impact factor: 8.800

5.  Low pH structure of heliorhodopsin reveals chloride binding site and intramolecular signaling pathway.

Authors:  Jessica E Besaw; Jörg Reichenwallner; Paolo De Guzman; Andrejs Tucs; Anling Kuo; Takefumi Morizumi; Koji Tsuda; Adnan Sljoka; R J Dwayne Miller; Oliver P Ernst
Journal:  Sci Rep       Date:  2022-08-17       Impact factor: 4.996

  5 in total

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