Literature DB >> 31140266

Futile Encounter Engineering of the DSR-M Dextransucrase Modifies the Resulting Polymer Length.

Marion Claverie1, Gianluca Cioci1, Matthieu Guionnet1, Julia Schörghuber2, Roman Lichtenecker2, Claire Moulis1, Magali Remaud-Simeon1, Guy Lippens1.   

Abstract

The factors that define the resulting polymer length of distributive polymerases are poorly understood. Here, starting from the crystal structure of the dextransucrase DSR-M in complex with an isomaltotetraose, we define different anchoring points for the incoming acceptor. Mutation of one of these, Trp624, decreases the catalytic rate of the enzyme but equally skews the size distribution of the resulting dextran chains toward shorter chains. Nuclear magnetic resonance analysis shows that this mutation influences both the dynamics of the active site and the water accessibility. Monte Carlo simulation of the elongation process allows interpretation of these results in terms of enhanced futile encounters, whereby the less effective binding increases the pool of effective seeds for the dextran chains and thereby directly determines the length distribution of the final polymers.

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Year:  2019        PMID: 31140266     DOI: 10.1021/acs.biochem.9b00373

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  3 in total

1.  Processivity of dextransucrases synthesizing very-high-molar-mass dextran is mediated by sugar-binding pockets in domain V.

Authors:  Marion Claverie; Gianluca Cioci; Marlène Vuillemin; Pauline Bondy; Magali Remaud-Simeon; Claire Moulis
Journal:  J Biol Chem       Date:  2020-03-11       Impact factor: 5.157

Review 2.  A mechanistic view of enzyme evolution.

Authors:  Gloria Yang; Charlotte M Miton; Nobuhiko Tokuriki
Journal:  Protein Sci       Date:  2020-08       Impact factor: 6.725

3.  A specific oligosaccharide-binding site in the alternansucrase catalytic domain mediates alternan elongation.

Authors:  Manon Molina; Claire Moulis; Nelly Monties; David Guieysse; Sandrine Morel; Gianluca Cioci; Magali Remaud-Siméon
Journal:  J Biol Chem       Date:  2020-05-14       Impact factor: 5.157

  3 in total

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