Literature DB >> 31135136

Fiber-Optic Raman Spectroscopy with Nature-Inspired Genetic Algorithms Enhances Real-Time in Vivo Detection and Diagnosis of Nasopharyngeal Carcinoma.

Petar Žuvela1, Kan Lin1, Chi Shu1, Wei Zheng1, Chwee Ming Lim2, Zhiwei Huang1.   

Abstract

Raman spectroscopy is an optical vibrational spectroscopic technique capable of probing specific biochemical structures and conformation of tissue and cells in biomedical systems. This work aims to assess the clinical utility of a fiber-optic Raman spectroscopy with nature-inspired genetic algorithms for enhancing in vivo detection and diagnosis of nasopharyngeal carcinoma (NPC) patients. The Raman diagnostic platform is developed based on simultaneous fingerprint (FP) and high-wavenumber (HW) fiber-optic Raman endoscopy associated with genetic algorithms-partial least-squares-linear discriminant analysis (GA-PLS-LDA). A total of 2126 in vivo FP/HW Raman spectra (598 NPC, 1528 normal) acquired from 113 tissue sites of 14 NPC patients and 48 healthy subjects during nasopharyngeal endoscopic examinations. Distinct Raman peaks have been identified (853 cm-1 - proteins, 1209 cm-1 - phenylalanine, 1265 cm-1 - proteins, 1335 cm-1 - proteins and nucleic acids, 1554 cm-1 - tryptophan, porphyrin, 2885 cm-1 - lipids, 2940 cm-1 - proteins, 3009 cm-1 - lipids, and 3250 cm-1 - water) that are related to the significant biochemical changes ( p < 1 × 10-5) in NPC compared to normal tissue. Raman diagnostic performance is evaluated through the leave-one-object (tissue site)-out cross-validation (LOOCV) method. A statistically significant GA-PLS-LDA model ( p < 1 × 10-5) on FP/HW Raman yields a CV diagnostic accuracy of 98.23% (111/113), sensitivity of 93.33% (28/30), and specificity of 100% (83/83) for NPC classification. This work demonstrates that the fiber-optic FP/HW Raman diagnostic platform developed has great promise for improving real-time in vivo detection and diagnosis of NPC at the molecular level during clinical nasopharyngeal endoscopy.

Entities:  

Year:  2019        PMID: 31135136     DOI: 10.1021/acs.analchem.9b00173

Source DB:  PubMed          Journal:  Anal Chem        ISSN: 0003-2700            Impact factor:   6.986


  6 in total

Review 1.  Mammalian cell and tissue imaging using Raman and coherent Raman microscopy.

Authors:  Anthony A Fung; Lingyan Shi
Journal:  Wiley Interdiscip Rev Syst Biol Med       Date:  2020-07-19

Review 2.  Multi-Modal Optical Imaging and Combined Phototherapy of Nasopharyngeal Carcinoma Based on a Nanoplatform.

Authors:  Yanping Lin; Ting Qiu; Yintao Lan; Zhaoyong Li; Xin Wang; Mengyu Zhou; Qiuyu Li; Yao Li; Junsheng Liang; Jian Zhang
Journal:  Int J Nanomedicine       Date:  2022-05-26

Review 3.  Machine Learning of Raman Spectroscopy Data for Classifying Cancers: A Review of the Recent Literature.

Authors:  Nathan Blake; Riana Gaifulina; Lewis D Griffin; Ian M Bell; Geraint M H Thomas
Journal:  Diagnostics (Basel)       Date:  2022-06-17

4.  Nuclear exosome HMGB3 secreted by nasopharyngeal carcinoma cells promotes tumour metastasis by inducing angiogenesis.

Authors:  Kaiwen Zhang; Dong Liu; Jianmei Zhao; Si Shi; Xin He; Peng Da; Yiwen You; Bo You
Journal:  Cell Death Dis       Date:  2021-05-28       Impact factor: 8.469

5.  Lipophilicity Determination of Antifungal Isoxazolo[3,4-b]pyridin-3(1H)-ones and Their N1-Substituted Derivatives with Chromatographic and Computational Methods.

Authors:  Krzesimir Ciura; Joanna Fedorowicz; Filip Andrić; Petar Žuvela; Katarzyna Ewa Greber; Paweł Baranowski; Piotr Kawczak; Joanna Nowakowska; Tomasz Bączek; Jarosław Sączewski
Journal:  Molecules       Date:  2019-11-26       Impact factor: 4.411

6.  Mechanistic Chromatographic Column Characterization for the Analysis of Flavonoids Using Quantitative Structure-Retention Relationships Based on Density Functional Theory.

Authors:  Bogusław Buszewski; Petar Žuvela; Gulyaim Sagandykova; Justyna Walczak-Skierska; Paweł Pomastowski; Jonathan David; Ming Wah Wong
Journal:  Int J Mol Sci       Date:  2020-03-17       Impact factor: 5.923

  6 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.