| Literature DB >> 31134089 |
Laura Santambrogio1, Stella J Berendam2, Victor H Engelhard2.
Abstract
Until a few years ago, lymphatic vessels and lymphatic endothelial cells (LEC) were viewed as part of a passive conduit for lymph and immune cells to reach lymph nodes (LN). However, recent work has shown that LEC are active immunological players whose interaction with dendritic cells and T cells is of important immunomodulatory relevance. While the immunological interaction between LEC and other immune cells has taken a center stage, molecular analysis of LEC antigen processing and presentation machinery is still lagging. Herein we review the current knowledge of LEC MHC I and MHC II antigen processing and presentation pathways, Including the role of LEC in antigen phagocytosis, classical, and non-classical MHC II presentation, proteasome processing and MHC I presentation, and cross-presentation. The ultimate goal is to provide an overview of the LEC antigen processing and presentation machinery that constitutes the molecular basis for their role in MHC I and MHC II-restricted immune responses.Entities:
Keywords: MHC class I; MHC class II; antigen processing and presentation; lymph; lymphatic endothelial cells
Mesh:
Substances:
Year: 2019 PMID: 31134089 PMCID: PMC6513971 DOI: 10.3389/fimmu.2019.01033
Source DB: PubMed Journal: Front Immunol ISSN: 1664-3224 Impact factor: 7.561
Comparative transcriptome profiling of antigen processing and presentation pathway genes from mouse lymphatic and blood endothelial cells.
| B2m | Beta-2 microglobulin | 477796 | 450780 | 69620 |
| H2-K1 | Histocompatibility 2, K1, K region | 221754 | 201711 | 28827 |
| H2-D1 | Histocompatibility 2, D region locus 1 | 107074 | 86751 | 24764 |
| H2-T23 | Histocompatibility 2, T region locus 23 | 10686 | 9464 | 6609 |
| H2-M3 | Histocompatibility 2, M region locus 3 | 2375 | 1656 | 1029 |
| H2-K2 | Histocompatibility 2, K region locus 2 | 1770 | 1203 | 904 |
| Mr1 | Major histocompatibility complex, class I-related | 1430 | 722 | 1134 |
| H2-Ke6 | H2-K region expressed gene 6 | 1373 | 1642 | 1671 |
| H2-T10 | Histocompatibility 2, T region locus 10 | 949 | 635 | 166 |
| H2-T24 | Histocompatibility 2, T region locus 24 | 771 | 591 | 244 |
| Cd1d1 | CD1d1 antigen | 639 | 386 | 197 |
| H2-Q4 | Histocompatibility 2, Q region locus 4 | 443 | 447 | 62 |
| H2-Q6 | Histocompatibility 2, Q region locus 6 | 436 | 347 | 3 |
| H2-Ke2 | H2-K region expressed gene 2 | 258 | 321 | 258 |
| H2-Q8 | NA | 194 | 206 | 4 |
| H2-T3 | Histocompatibility 2, T region locus 3 | 21 | 2 | 11 |
| Cd1d2 | CD1d2 antigen | 20 | 25 | 3 |
| H2-M2 | Histocompatibility 2, M region locus 2 | 19 | 194 | 4 |
| H2-M5 | Histocompatibility 2, M region locus 5 | 7 | 14 | 6 |
| H2-Q1 | histocompatibility 2, Q region locus 1 | 3 | 3 | 1 |
| H2-Q10 | Histocompatibility 2, Q region locus 10 | 2 | 11 | 6 |
| H2-Bl | Histocompatibility 2, blastocyst | 1 | 2 | 1 |
| Cd74 | CD74 antigen (invariant chain) | 1999 | 2517 | 64 |
| H2-Ab1 | Histocompatibility 2, class II antigen A, beta 1 | 1063 | 2305 | 187 |
| H2-Aa | Histocompatibility 2, class II antigen A, alpha | 380 | 1584 | 100 |
| H2-Eb1 | Histocompatibility 2, class II antigen E beta | 304 | 762 | 79 |
| H2-DMb1 | Histocompatibility 2, class II, locus Mb1 | 103 | 85 | 5 |
| Ciita | Class II transactivator | 36 | 92 | 13 |
| H2-Ob | Histocompatibility 2, O region beta locus | 33 | 494 | 8 |
| H2-DMa | Histocompatibility 2, class II, locus DMa | 33 | 83 | 10 |
| H2-Oa | Histocompatibility 2, O region alpha locus | 11 | 36 | 0 |
| H2-DMb2 | Histocompatibility 2, class II, locus Mb2 | 9 | 51 | 1 |
| H2-Eb2 | Histocompatibility 2, class II antigen E beta2 | 2 | 26 | 0 |
| Psma1 | Proteasome subunit, alpha 1 | 1804 | 1990 | 2194 |
| Psma2 | Proteasome subunit, alpha 2 | 2436 | 2472 | 2091 |
| Psma3 | Proteasome subunit, alpha 3 | 1313 | 1320 | 1313 |
| Psma4 | Proteasome subunit, alpha 4 | 2137 | 1939 | 1765 |
| Psma5 | Proteasome subunit, alpha 5 | 690 | 680 | 635 |
| Psma6 | Proteasome subunit, alpha 6 | 4479 | 4501 | 4096 |
| Psma7 | Proteasome subunit, alpha 7 | 3964 | 3890 | 3738 |
| Psma8 | Proteasome subunit, alpha 8 | 11 | 52 | 16 |
| Psmb1 | Proteasome subunit, beta 1 | 3600 | 3617 | 3368 |
| Psmb2 | Proteasome subunit, beta 2 | 3303 | 2471 | 2984 |
| Psmb3 | Proteasome subunit, beta 3 | 1751 | 2020 | 2107 |
| Psmb4 | Proteasome subunit, beta 4 | 2504 | 2775 | 2663 |
| Psmb5 | Proteasome subunit, beta 5 | 1405 | 1376 | 1159 |
| Psmb6 | Proteasome subunit, beta 6 | 2893 | 2753 | 2380 |
| Psmb7 | Proteasome subunit, beta 7 | 4851 | 5900 | 2203 |
| Psmb8 | Proteasome subunit, beta 8 (LMP7) | 4679 | 4348 | 564 |
| Psmb9 | Proteasome subunit, beta 9 (LMP2) | 4288 | 4159 | 563 |
| Psmb10 | Proteasome subunit, beta 10 | 5571 | 6015 | 1179 |
| Psmb11 | Proteasome subunit, beta 11 | 1 | 6 | 3 |
| Psmc1 | Proteasome 26S subunit, ATPase 1 | 1714 | 1902 | 1824 |
| Psmc2 | Proteasome 26S subunit, ATPase 2 | 2290 | 2252 | 2852 |
| Psmc3 | Proteasome 26S subunit, ATPase 3 | 2431 | 2573 | 2450 |
| Psmc3ip | Proteasome 26S subunit, ATPase 3, interacting protein | 41 | 30 | 58 |
| Psmc4 | Proteasome 26S subunit, ATPase, 4 | 2271 | 2575 | 2753 |
| Psmc5 | Protease 26S subunit, ATPase 5 | 1763 | 1666 | 1815 |
| Psmc6 | Proteasome 26S subunit, ATPase, 6 | 2164 | 2496 | 2319 |
| Psmd1 | Proteasome 26S subunit, non-ATPase, 1 | 2038 | 2012 | 2786 |
| Psmd10 | Proteasome 26S subunit, non-ATPase, 10 | 982 | 698 | 499 |
| Psmd11 | Proteasome 26S subunit, non-ATPase, 11 | 482 | 502 | 450 |
| Psmd12 | Proteasome 26S subunit, non-ATPase, 12 | 2264 | 2639 | 2378 |
| Psmd13 | Proteasome 26S subunit, non-ATPase, 13 | 267 | 272 | 258 |
| Psmd14 | Proteasome 26S subunit, non-ATPase, 14 | 1289 | 1302 | 1376 |
| Psmd2 | Proteasome 26S subunit, non-ATPase, 2 | 2695 | 2767 | 3100 |
| Psmd3 | Proteasome 26S subunit, non-ATPase, 3 | 1064 | 1201 | 1117 |
| Psmd4 | Proteasome 26S subunit, non-ATPase, 4 | 1057 | 1213 | 1307 |
| Psmd5 | Proteasome 26S subunit, non-ATPase, 5 | 726 | 827 | 896 |
| Psmd6 | Proteasome 26S subunit, non-ATPase, 6 | 2893 | 2460 | 3000 |
| Psmd7 | Proteasome 26S subunit, non-ATPase, 7 | 2678 | 2492 | 2579 |
| Psmd8 | Proteasome 26S subunit, non-ATPase, 8 | 2601 | 2684 | 2594 |
| Psmd9 | Proteasome 26S subunit, non-ATPase, 9 | 1228 | 916 | 1206 |
| Psme1 | Proteasome activator subunit 1 (PA28 alpha) | 4330 | 4983 | 2175 |
| Psme2 | Proteasome activator subunit 2 (PA28 beta) | 769 | 903 | 391 |
| Psme3 | Proteasome activator subunit 3 (PA28 gamma, Ki) | 2495 | 2173 | 1951 |
| Psme4 | Proteasome activator subunit 4 | 2923 | 2697 | 2175 |
| Psmf1 | Proteasome inhibitor subunit 1 | 950 | 918 | 926 |
| Psmg1 | Proteasome assembly chaperone 1 | 442 | 414 | 384 |
| Psmg2 | Proteasome assembly chaperone 2 | 1435 | 1081 | 1677 |
| Psmg3 | Proteasome assembly chaperone 3 | 283 | 232 | 243 |
| Psmg4 | Proteasome assembly chaperone 4 | 667 | 591 | 494 |
| Tpp1 | Tripeptidyl peptidase I | 11374 | 9235 | 6824 |
| Tpp2 | Tripeptidyl peptidase II | 2910 | 3005 | 2429 |
| Nrd1 | Nardilysin | 2694 | 2582 | 3040 |
| Thop1 | Thimet oligopeptidase 1 | 62 | 66 | 82 |
| Tapbp | TAP binding protein | 24961 | 29085 | 11373 |
| Tap1 | Transporter 1, ATP-binding cassette, sub-family B (MDR/TAP) | 3796 | 3489 | 565 |
| Tap2 | Transporter 2, ATP-binding cassette, sub-family B (MDR/TAP) | 2398 | 2223 | 630 |
| Erap1 | Endoplasmic reticulum aminopeptidase 1 | 1421 | 1467 | 655 |
| Tapbpl | TAP binding protein-like | 502 | 589 | 222 |
| Ctsd | Cathepsin D | 32104 | 8139 | 14906 |
| Ctsb | Cathepsin B | 15143 | 10660 | 39555 |
| Ctsl | Cathepsin L | 13726 | 7431 | 2687 |
| Ctsh | Cathepsin H | 3836 | 1095 | 1823 |
| Ctss | Cathepsin S | 3670 | 1013 | 46 |
| Ctsz | Cathepsin Z | 3352 | 3482 | 2129 |
| Ctso | Cathepsin O | 3005 | 3189 | 2627 |
| Ctsa | Cathepsin A | 2141 | 2659 | 1973 |
| Ctsf | Cathepsin F | 709 | 351 | 790 |
| Ctsk | Cathepsin K | 299 | 60 | 123 |
| Ctsc | Cathepsin C | 89 | 338 | 24 |
| Ctsg | Cathepsin G | 46 | 147 | 2 |
| Ctsw | Cathepsin W | 19 | 53 | 11 |
| Ctse | Cathepsin E | 2 | 7 | 0 |
| Cst3 | Cystatin C | 13094 | 28792 | 25352 |
| Cstb | Cystatin B | 9445 | 3702 | 3390 |
| Cst10 | Cystatin 10 (chondrocytes) | 6582 | 16279 | 22 |
| Cst6 | Cystatin E/M | 67 | 66 | 90 |
| Cstad | CSA-conditional, T cell activation-dependent protein | 34 | 74 | 12 |
| Csta | Cystatin A | 11 | 7 | 5 |
| Cst7 | Cystatin F (leukocystatin) | 5 | 19 | 2 |
| Cst9 | Cystatin 9 | 0 | 0 | 7 |
Data are reported as normalized gene expression levels as Fragments Per Kilobase of transcript per Million mapped reads (FPKM). Data is from Berendam. (.