Literature DB >> 31131510

Toward Axonal System Biology: Genome Wide Views of Local mRNA Translation.

Joaquina Farias1,2, José Roberto Sotelo1, José Sotelo-Silveira2,3.   

Abstract

Neurons present a highly polarized morphology, often displaying a significantly imbalanced distribution of the cytoplasm between the somatic and axonal domains. This imbalance requires cell-specific mechanisms for the maintenance of the axoplasmic mass during development, neuronal homeostasis, and recovery after injury. Although it has been clearly demonstrated that axoplasmic transport contributes a large amount of proteins to the axons, local protein synthesis has been fully accepted as an important complementary source of proteins, which aids in the maintenance of the axoplasmic mass in both normal and regenerating conditions. This review analyzes and highlights the most important advances in the knowledge of the axonal transcriptome, translatome, and proteome at a genome-wide scale. It is discussed how this knowledge has provided researchers with new insights regarding the involvement of local protein synthesis in many key neuronal functions. In addition, challenges, open questions, and methods currently available to study axonal mRNA localization and protein synthesis are addressed.
© 2019 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Entities:  

Keywords:  axon; axonal local protein synthesis; axonal transport; transcriptome; translatome

Mesh:

Substances:

Year:  2019        PMID: 31131510     DOI: 10.1002/pmic.201900054

Source DB:  PubMed          Journal:  Proteomics        ISSN: 1615-9853            Impact factor:   3.984


  5 in total

1.  Axon microdissection and transcriptome profiling reveals the in vivo RNA content of fully differentiated myelinated motor axons.

Authors:  Joaquina Farias; Christine E Holt; José R Sotelo; José R Sotelo-Silveira
Journal:  RNA       Date:  2020-02-12       Impact factor: 4.942

2.  Distinct small non-coding RNA landscape in the axons and released extracellular vesicles of developing primary cortical neurons and the axoplasm of adult nerves.

Authors:  Raquel Mesquita-Ribeiro; Rafael Sebastián Fort; Alex Rathbone; Joaquina Farias; Cristiano Lucci; Victoria James; Jose Sotelo-Silveira; Maria Ana Duhagon; Federico Dajas-Bailador
Journal:  RNA Biol       Date:  2021-12-09       Impact factor: 4.652

3.  Editorial: Pathways and Processes Underpinning Axonal Biology and Pathobiology.

Authors:  Pabitra K Sahoo; Dianna E Willis; James N Sleigh
Journal:  Front Mol Neurosci       Date:  2022-03-23       Impact factor: 5.639

4.  Transcriptomes of Injured Lamprey Axon Tips: Single-Cell RNA-Seq Suggests Differential Involvement of MAPK Signaling Pathways in Axon Retraction and Regeneration after Spinal Cord Injury.

Authors:  Li-Qing Jin; Yan Zhou; Yue-Sheng Li; Guixin Zhang; Jianli Hu; Michael E Selzer
Journal:  Cells       Date:  2022-07-27       Impact factor: 7.666

Review 5.  Functional Genomics of Axons and Synapses to Understand Neurodegenerative Diseases.

Authors:  Andres Di Paolo; Joaquin Garat; Guillermo Eastman; Joaquina Farias; Federico Dajas-Bailador; Pablo Smircich; José Roberto Sotelo-Silveira
Journal:  Front Cell Neurosci       Date:  2021-06-25       Impact factor: 5.505

  5 in total

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