Literature DB >> 31127375

Updating and interaction of polycomb repressive complex 2 components in maize (Zea mays).

Jiacheng Ni1, Xuexia Ma1, Yu Feng1, Qiuzhen Tian2, Yongyan Wang2, Ningkun Xu2, Jihua Tang2, Guifeng Wang3,4.   

Abstract

MAIN
CONCLUSION: The information on core components in maize polycomb repressive complex 2 (PRC2) are updated at a genome-wide scale, and the protein-protein interaction networks of PRC2 components are further provided in maize. The evolutionarily conserved polycomb group (PcG) proteins form multi-subunits polycomb repressive complexes (PRCs) that repress gene expression via chromatin condensation. In Arabidopsis, three distinct PRC2s have been identified, each determining a specific developmental program with partly functional redundancy. However, the core components and biological functions of PRC2 in cereals remain obscure. Here, we updated the information on maize PRC2 components at a genome-wide scale. Maize PRC2 subunits are highly duplicated, with five MSI1, three E(z), two ESC and two Su(z)12 homologs. ZmFIE1 is preferentially expressed in the endosperm, whereas the remaining are broadly expressed in many tissues. ZmCLF/MEZ1 and ZmFIE1 are maternally expressed imprinted genes, in contrast to the paternal-dominantly expression of ZmFIE2 in the endosperm. In maize, E(z) members likely provide a scaffold for assembling PRC2 complexes, whereas Su(z)12 and p55/MSI1-like proteins together reinforce the complex; ESC members probably determine its specificity: FIE1-PRC2 regulates endosperm cell development, whereas FIE2-PRC2 controls other cell types. The duplicated Brassicaceae-specific MEA and FIS2 also directly interact with maize PRC2 members. Together, this study establishes a roadmap for protein-protein interactions of maize PRC2 components, providing new insights into their functions in the growth and development of cereals.

Entities:  

Keywords:  Cereal; Epigenetics; H3K27me3; Histone; Polycomb group protein; Protein–protein interaction; Seed

Mesh:

Substances:

Year:  2019        PMID: 31127375     DOI: 10.1007/s00425-019-03193-4

Source DB:  PubMed          Journal:  Planta        ISSN: 0032-0935            Impact factor:   4.116


  68 in total

1.  Mutations in the FIE and MEA genes that encode interacting polycomb proteins cause parent-of-origin effects on seed development by distinct mechanisms.

Authors:  R Yadegari; T Kinoshita; O Lotan; G Cohen; A Katz; Y Choi; A Katz; K Nakashima; J J Harada; R B Goldberg; R L Fischer; N Ohad
Journal:  Plant Cell       Date:  2000-12       Impact factor: 11.277

Review 2.  Genomic imprinting and seed development: endosperm formation with and without sex.

Authors:  U Grossniklaus; C Spillane; D R Page; C Köhler
Journal:  Curr Opin Plant Biol       Date:  2001-02       Impact factor: 7.834

3.  Drosophila enhancer of Zeste/ESC complexes have a histone H3 methyltransferase activity that marks chromosomal Polycomb sites.

Authors:  Birgit Czermin; Raffaella Melfi; Donna McCabe; Volker Seitz; Axel Imhof; Vincenzo Pirrotta
Journal:  Cell       Date:  2002-10-18       Impact factor: 41.582

4.  The VERNALIZATION 2 gene mediates the epigenetic regulation of vernalization in Arabidopsis.

Authors:  A R Gendall; Y Y Levy; A Wilson; C Dean
Journal:  Cell       Date:  2001-11-16       Impact factor: 41.582

5.  Maintenance of genomic imprinting at the Arabidopsis medea locus requires zygotic DDM1 activity.

Authors:  J P Vielle-Calzada; J Thomas; C Spillane; A Coluccio; M A Hoeppner; U Grossniklaus
Journal:  Genes Dev       Date:  1999-11-15       Impact factor: 11.361

6.  Interaction of the Arabidopsis polycomb group proteins FIE and MEA mediates their common phenotypes.

Authors:  C Spillane; C MacDougall; C Stock; C Köhler; J P Vielle-Calzada; S M Nunes; U Grossniklaus; J Goodrich
Journal:  Curr Biol       Date:  2000-11-30       Impact factor: 10.834

7.  Sequence relationships, conserved domains, and expression patterns for maize homologs of the polycomb group genes E(z), esc, and E(Pc).

Authors:  Nathan M Springer; Olga N Danilevskaya; Pedro Hermon; Tim G Helentjaris; Ronald L Phillips; Heidi F Kaeppler; Shawn M Kaeppler
Journal:  Plant Physiol       Date:  2002-04       Impact factor: 8.340

8.  Expression and parent-of-origin effects for FIS2, MEA, and FIE in the endosperm and embryo of developing Arabidopsis seeds.

Authors:  M Luo; P Bilodeau; E S Dennis; W J Peacock; A Chaudhury
Journal:  Proc Natl Acad Sci U S A       Date:  2000-09-12       Impact factor: 11.205

9.  Duplicated fie genes in maize: expression pattern and imprinting suggest distinct functions.

Authors:  Olga N Danilevskaya; Pedro Hermon; Sabine Hantke; Michael G Muszynski; Krishna Kollipara; Evgueni V Ananiev
Journal:  Plant Cell       Date:  2003-02       Impact factor: 11.277

10.  TSO1 is a novel protein that modulates cytokinesis and cell expansion in Arabidopsis.

Authors:  B A Hauser; J Q He; S O Park; C S Gasser
Journal:  Development       Date:  2000-05       Impact factor: 6.868

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  5 in total

1.  Dissecting the Seed Maturation and Germination Processes in the Non-Orthodox Quercus ilex Species Based on Protein Signatures as Revealed by 2-DE Coupled to MALDI-TOF/TOF Proteomics Strategy.

Authors:  Besma Sghaier-Hammami; Sofiene B M Hammami; Narjes Baazaoui; Consuelo Gómez-Díaz; Jesús V Jorrín-Novo
Journal:  Int J Mol Sci       Date:  2020-07-09       Impact factor: 5.923

2.  The maternally expressed polycomb group gene OsEMF2a is essential for endosperm cellularization and imprinting in rice.

Authors:  Xiaojun Cheng; Meiyao Pan; Zhiguo E; Yong Zhou; Baixiao Niu; Chen Chen
Journal:  Plant Commun       Date:  2020-07-02

Review 3.  Polycomb Repressive Complex 2 in Eukaryotes-An Evolutionary Perspective.

Authors:  Mallika Vijayanathan; María Guadalupe Trejo-Arellano; Iva Mozgová
Journal:  Epigenomes       Date:  2022-01-17

4.  Riboflavin integrates cellular energetics and cell cycle to regulate maize seed development.

Authors:  Qiuzhen Tian; Gang Wang; Xuexia Ma; Qingwen Shen; Mengli Ding; Xueyi Yang; Xiaoli Luo; Rongrong Li; Zhenghui Wang; Xiangyang Wang; Zhiyuan Fu; Qinghua Yang; Jihua Tang; Guifeng Wang
Journal:  Plant Biotechnol J       Date:  2022-04-29       Impact factor: 13.263

Review 5.  Dynamics of H3K27me3 Modification on Plant Adaptation to Environmental Cues.

Authors:  Qingwen Shen; Yisheng Lin; Yingbo Li; Guifeng Wang
Journal:  Plants (Basel)       Date:  2021-06-08
  5 in total

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