Literature DB >> 31120332

Intracerebral Hemorrhage Induces Inflammatory Gene Expression in Peripheral Blood: Global Transcriptional Profiling in Intracerebral Hemorrhage Patients.

Kyle B Walsh1,2, Xiang Zhang3, Xiaoting Zhu4, Eric Wohleb5,6, Daniel Woo1,7, Long Lu4, Opeolu Adeoye1,2.   

Abstract

To perform global transcriptome profiling using RNA-seq in the peripheral blood of intracerebral hemorrhage (ICH) patients. In 11 patients with ICH, peripheral blood was collected within 24 h of symptom onset or last known well, and a second blood draw occurred 72 h (±6) after the first. RNA-seq identified differentially expressed genes (DEGs) between the first and second samples. Biological pathway enrichment analysis was performed with Ingenuity® Pathway Analysis (IPA). A total of 16,640 genes were identified and 218 were significant DEGs after ICH (false discovery rate <0.1). IPA identified 97 disease and functional categories that were significantly upregulated (z-score >2) post-ICH; 46 categories were specifically related to immune cell activation, 22 to general cellular activation processes, and 4 to other inflammation-related responses. In the canonical pathway and network analysis, inflammatory mediators of particular importance included interleukin-8, NF-κB, ERK1/2, and members of the integrin class. ICH induced peripheral blood gene expression at 72 to 96 h compared with 0 to 24 h from symptom onset. DEGs that were highly expressed included those related to inflammation and activation of the immune response. Further research is needed to determine whether these changes affect outcomes and may represent new therapeutic targets.

Entities:  

Keywords:  RNA-seq; gene expression; inflammation; intracerebral hemorrhage; stroke

Mesh:

Substances:

Year:  2019        PMID: 31120332      PMCID: PMC6909779          DOI: 10.1089/dna.2018.4550

Source DB:  PubMed          Journal:  DNA Cell Biol        ISSN: 1044-5498            Impact factor:   3.311


  74 in total

1.  Tailoring therapies--improving the management of early breast cancer: St Gallen International Expert Consensus on the Primary Therapy of Early Breast Cancer 2015.

Authors:  A S Coates; E P Winer; A Goldhirsch; R D Gelber; M Gnant; M Piccart-Gebhart; B Thürlimann; H-J Senn
Journal:  Ann Oncol       Date:  2015-05-04       Impact factor: 32.976

2.  Response to Letter Regarding Article, "Monocyte Count and 30-Day Case Fatality in Intracerebral Hemorrhage".

Authors:  Kyle B Walsh; Daniel Woo; Opeolu Adeoye
Journal:  Stroke       Date:  2015-10-13       Impact factor: 7.914

3.  Genomic correlates of response to CTLA-4 blockade in metastatic melanoma.

Authors:  Eliezer M Van Allen; Diana Miao; Bastian Schilling; Sachet A Shukla; Christian Blank; Lisa Zimmer; Antje Sucker; Uwe Hillen; Marnix H Geukes Foppen; Simone M Goldinger; Jochen Utikal; Jessica C Hassel; Benjamin Weide; Katharina C Kaehler; Carmen Loquai; Peter Mohr; Ralf Gutzmer; Reinhard Dummer; Stacey Gabriel; Catherine J Wu; Dirk Schadendorf; Levi A Garraway
Journal:  Science       Date:  2015-09-10       Impact factor: 47.728

4.  Monocyte Count and 30-Day Case Fatality in Intracerebral Hemorrhage.

Authors:  Kyle B Walsh; Padmini Sekar; Carl D Langefeld; Charles J Moomaw; Mitchell S V Elkind; Amelia K Boehme; Michael L James; Jennifer Osborne; Kevin N Sheth; Daniel Woo; Opeolu Adeoye
Journal:  Stroke       Date:  2015-06-30       Impact factor: 7.914

Review 5.  An update on inflammation in the acute phase of intracerebral hemorrhage.

Authors:  Sheng Chen; Qingwu Yang; Gang Chen; John H Zhang
Journal:  Transl Stroke Res       Date:  2014-12-23       Impact factor: 6.829

6.  Bacteroides fragilis enterotoxin induces intestinal epithelial cell secretion of interleukin-8 through mitogen-activated protein kinases and a tyrosine kinase-regulated nuclear factor-kappaB pathway.

Authors:  Shaoguang Wu; Jan Powell; Nes Mathioudakis; Sheryl Kane; Ellen Fernandez; Cynthia L Sears
Journal:  Infect Immun       Date:  2004-10       Impact factor: 3.441

7.  α4 integrin is a regulator of leukocyte recruitment after experimental intracerebral hemorrhage.

Authors:  Matthew D Hammond; William G Ambler; Youxi Ai; Lauren H Sansing
Journal:  Stroke       Date:  2014-07-10       Impact factor: 7.914

8.  Curcumin reduces brain-infiltrating T lymphocytes after intracerebral hemorrhage in mice.

Authors:  Wei Liu; Jichao Yuan; Haitao Zhu; Xuan Zhang; Lan Li; Xiaojun Liao; Zexian Wen; Yaxing Chen; Hua Feng; Jiangkai Lin
Journal:  Neurosci Lett       Date:  2016-03-26       Impact factor: 3.046

9.  Anti-inflammatory effects of fimasartan via Akt, ERK, and NFκB pathways on astrocytes stimulated by hemolysate.

Authors:  Xiu-Li Yang; Chi Kyung Kim; Tae Jung Kim; Jing Sun; Doeun Rim; Young-Ju Kim; Sang-Bae Ko; Hyunduk Jang; Byung-Woo Yoon
Journal:  Inflamm Res       Date:  2015-11-25       Impact factor: 4.575

Review 10.  Translating RNA sequencing into clinical diagnostics: opportunities and challenges.

Authors:  Sara A Byron; Kendall R Van Keuren-Jensen; David M Engelthaler; John D Carpten; David W Craig
Journal:  Nat Rev Genet       Date:  2016-03-21       Impact factor: 53.242

View more
  14 in total

1.  Long-term effects of wildfire smoke exposure during early life on the nasal epigenome in rhesus macaques.

Authors:  Anthony P Brown; Lucy Cai; Benjamin I Laufer; Lisa A Miller; Janine M LaSalle; Hong Ji
Journal:  Environ Int       Date:  2021-11-24       Impact factor: 9.621

2.  Perinatal Morphine Exposure Leads to Sex-Dependent Executive Function Deficits and Microglial Changes in Mice.

Authors:  Brittany L Smith; Tess A Guzman; Alexander H Brendle; Collin J Laaker; Alexis Ford; Adam R Hiltz; Junfang Zhao; Kenneth D R Setchell; Teresa M Reyes
Journal:  eNeuro       Date:  2022-10-17

3.  Hypoxia- and Inflammation-Related Transcription Factor SP3 May Be Involved in Platelet Activation and Inflammation in Intracranial Hemorrhage.

Authors:  Ding Wan; Jin Feng; Peng Wang; Zhenxing Yang; Tao Sun
Journal:  Front Neurol       Date:  2022-06-02       Impact factor: 4.086

4.  miR-181a Mediates Inflammatory Gene Expression After Intracerebral Hemorrhage: An Integrated Analysis of miRNA-seq and mRNA-seq in a Swine ICH Model.

Authors:  Kyle B Walsh; Kip D Zimmerman; Xiang Zhang; Stacie L Demel; Yu Luo; Carl D Langefeld; Eric Wohleb; Grant Schulert; Daniel Woo; Opeolu Adeoye
Journal:  J Mol Neurosci       Date:  2021-03-23       Impact factor: 3.444

5.  The dynamics of cell death patterns and regeneration during acute liver injury in mice.

Authors:  Shuai Shao; Yu Zhang; Guantong Li; Zhenjun Yu; Yingying Cao; Lina Zheng; Kun Zhang; Xiaohui Han; Zhemin Shi; Hongmei Cui; Xiaomeng Song; Wei Hong; Tao Han
Journal:  FEBS Open Bio       Date:  2022-03-05       Impact factor: 2.693

6.  Formation of the Mouse Internal Capsule and Cerebral Peduncle: A Pioneering Role for Striatonigral Axons as Revealed in Isl1 Conditional Mutants.

Authors:  Jacqueline M Ehrman; Paloma Merchan-Sala; Lisa A Ehrman; Bin Chen; Hee-Woong Lim; Ronald R Waclaw; Kenneth Campbell
Journal:  J Neurosci       Date:  2022-03-10       Impact factor: 6.709

7.  The Changes of Leukocytes in Brain and Blood After Intracerebral Hemorrhage.

Authors:  Shuhao Mei; Yijie Shao; Yuanjian Fang; Jia'nan Lu; Jingwei Zheng; Shenbin Xu; Haijian Wu; Zeyu Sun; Jun Yu; Sheng Chen; Zhen Wang; Jianmin Zhang
Journal:  Front Immunol       Date:  2021-02-15       Impact factor: 7.561

8.  Isolation and long-term expansion of murine epidermal stem-like cells.

Authors:  Jingjing Wang; Maureen Mongan; Xiang Zhang; Ying Xia
Journal:  PLoS One       Date:  2021-07-16       Impact factor: 3.240

9.  Systematic Understanding of Mechanism of Yi-Qi-Huo-Xue Decoction Against Intracerebral Hemorrhagic Stroke Using a Network Pharmacology Approach.

Authors:  Jian Li; Ming Ye; Jueming Gao; Yeqing Zhang; Qiyong Zhu; Weibang Liang
Journal:  Med Sci Monit       Date:  2020-08-08

10.  Identification of Candidate Blood mRNA Biomarkers in Intracerebral Hemorrhage Using Integrated Microarray and Weighted Gene Co-expression Network Analysis.

Authors:  Feng Jin; Lei Li; Yuehan Hao; Ling Tang; Yuye Wang; Zhiyi He
Journal:  Front Genet       Date:  2021-07-19       Impact factor: 4.599

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.