Literature DB >> 31120240

Inhibition of Marburg Virus RNA Synthesis by a Synthetic Anti-VP35 Antibody.

Parmeshwar Amatya1,2, Nicole Wagner3, Gang Chen4, Priya Luthra5, Liuqing Shi3, Dominika Borek6, Alevtina Pavlenco4, Henry Rohrs3, Christopher F Basler5, Sachdev S Sidhu4, Michael L Gross3, Daisy W Leung1,2.   

Abstract

Marburg virus causes sporadic outbreaks of severe hemorrhagic fever with high case fatality rates. Approved, effective, and safe therapeutic or prophylactic countermeasures are lacking. To address this, we used phage display to engineer a synthetic antibody, sFab H3, which binds the Marburg virus VP35 protein (mVP35). mVP35 is a critical cofactor of the viral replication complex and a viral immune antagonist. sFab H3 displayed high specificity for mVP35 and not for the closely related Ebola virus VP35. sFab H3 inhibited viral-RNA synthesis in a minigenome assay, suggesting its potential use as an antiviral. We characterized sFab H3 by a combination of biophysical and biochemical methods, and a crystal structure of the complex solved to 1.7 Å resolution defined the molecular interface between the sFab H3 and mVP35 interferon inhibitory domain. Our study identifies mVP35 as a therapeutic target using an approach that provides a framework for generating engineered Fabs targeting other viral proteins.

Entities:  

Keywords:  IFN antagonist; Marburg virus; VP35; X-ray crystallography; mass spectrometry; phage display; synthetic antibodies

Year:  2019        PMID: 31120240      PMCID: PMC6827488          DOI: 10.1021/acsinfecdis.9b00091

Source DB:  PubMed          Journal:  ACS Infect Dis        ISSN: 2373-8227            Impact factor:   5.084


  41 in total

1.  MOLPROBITY: structure validation and all-atom contact analysis for nucleic acids and their complexes.

Authors:  Ian W Davis; Laura Weston Murray; Jane S Richardson; David C Richardson
Journal:  Nucleic Acids Res       Date:  2004-07-01       Impact factor: 16.971

2.  The CCP4 suite: programs for protein crystallography.

Authors: 
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  1994-09-01

3.  Structural basis for KIT receptor tyrosine kinase inhibition by antibodies targeting the D4 membrane-proximal region.

Authors:  Andrey V Reshetnyak; Bryce Nelson; Xiarong Shi; Titus J Boggon; Alevtina Pavlenco; Elizabeth M Mandel-Bausch; Francisco Tome; Yoshihisa Suzuki; Sachdev S Sidhu; Irit Lax; Joseph Schlessinger
Journal:  Proc Natl Acad Sci U S A       Date:  2013-10-14       Impact factor: 11.205

Review 4.  Filovirus pathogenesis and immune evasion: insights from Ebola virus and Marburg virus.

Authors:  Ilhem Messaoudi; Gaya K Amarasinghe; Christopher F Basler
Journal:  Nat Rev Microbiol       Date:  2015-10-06       Impact factor: 60.633

5.  Crystal Structure of the Marburg Virus Nucleoprotein Core Domain Chaperoned by a VP35 Peptide Reveals a Conserved Drug Target for Filovirus.

Authors:  Tengfei Zhu; Hao Song; Ruchao Peng; Yi Shi; Jianxun Qi; George F Gao
Journal:  J Virol       Date:  2017-08-24       Impact factor: 5.103

6.  MassMatrix: a database search program for rapid characterization of proteins and peptides from tandem mass spectrometry data.

Authors:  Hua Xu; Michael A Freitas
Journal:  Proteomics       Date:  2009-03       Impact factor: 3.984

7.  Inhibiting pyrimidine biosynthesis impairs Ebola virus replication through depletion of nucleoside pools and activation of innate immune responses.

Authors:  Priya Luthra; Jacinth Naidoo; Colette A Pietzsch; Sampriti De; Sudip Khadka; Manu Anantpadma; Caroline G Williams; Megan R Edwards; Robert A Davey; Alexander Bukreyev; Joseph M Ready; Christopher F Basler
Journal:  Antiviral Res       Date:  2018-08-23       Impact factor: 5.970

8.  CDR-H3 diversity is not required for antigen recognition by synthetic antibodies.

Authors:  Helena Persson; Wei Ye; Amy Wernimont; Jarrett J Adams; Akiko Koide; Shohei Koide; Robert Lam; Sachdev S Sidhu
Journal:  J Mol Biol       Date:  2012-12-03       Impact factor: 5.469

9.  Expressed murine and human CDR-H3 intervals of equal length exhibit distinct repertoires that differ in their amino acid composition and predicted range of structures.

Authors:  Michael Zemlin; Martin Klinger; Jason Link; Cosima Zemlin; Karl Bauer; Jeffrey A Engler; Harry W Schroeder; Perry M Kirkham
Journal:  J Mol Biol       Date:  2003-12-05       Impact factor: 5.469

10.  Synthetic antibodies from a four-amino-acid code: a dominant role for tyrosine in antigen recognition.

Authors:  Frederic A Fellouse; Christian Wiesmann; Sachdev S Sidhu
Journal:  Proc Natl Acad Sci U S A       Date:  2004-08-11       Impact factor: 11.205

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  7 in total

1.  Antigenic landscapes on Staphylococcus aureus pore-forming toxins reveal insights into specificity and cross-neutralization.

Authors:  Shweta Kailasan; Ravi Kant; Madeleine Noonan-Shueh; Tulasikumari Kanipakala; Grant Liao; Sergey Shulenin; Daisy W Leung; Richard A Alm; Rajan P Adhikari; Gaya K Amarasinghe; Michael L Gross; M Javad Aman
Journal:  MAbs       Date:  2022 Jan-Dec       Impact factor: 6.440

Review 2.  Developing Recombinant Antibodies by Phage Display Against Infectious Diseases and Toxins for Diagnostics and Therapy.

Authors:  Kristian Daniel Ralph Roth; Esther Veronika Wenzel; Maximilian Ruschig; Stephan Steinke; Nora Langreder; Philip Alexander Heine; Kai-Thomas Schneider; Rico Ballmann; Viola Fühner; Philipp Kuhn; Thomas Schirrmann; André Frenzel; Stefan Dübel; Maren Schubert; Gustavo Marçal Schmidt Garcia Moreira; Federico Bertoglio; Giulio Russo; Michael Hust
Journal:  Front Cell Infect Microbiol       Date:  2021-07-07       Impact factor: 5.293

Review 3.  Mass Spectrometry-Based Structural Virology.

Authors:  Tobias P Wörner; Tatiana M Shamorkina; Joost Snijder; Albert J R Heck
Journal:  Anal Chem       Date:  2020-12-04       Impact factor: 6.986

4.  Nipah Virus V Protein Binding Alters MDA5 Helicase Folding Dynamics.

Authors:  Nicole D Wagner; Hejun Liu; Henry W Rohrs; Gaya K Amarasinghe; Michael L Gross; Daisy W Leung
Journal:  ACS Infect Dis       Date:  2021-12-08       Impact factor: 5.084

5.  Mining of Marburg Virus Proteome for Designing an Epitope-Based Vaccine.

Authors:  Mohamed A Soltan; Waleed K Abdulsahib; Mahmoud Amer; Ahmed M Refaat; Alaa A Bagalagel; Reem M Diri; Sarah Albogami; Eman Fayad; Refaat A Eid; Sherin M A Sharaf; Sameh S Elhady; Khaled M Darwish; Muhammad Alaa Eldeen
Journal:  Front Immunol       Date:  2022-07-15       Impact factor: 8.786

6.  Marburg virus re-emerged in 2022: recently detected in Ghana, another zoonotic pathogen coming up amid rising cases of Monkeypox and ongoing COVID-19 pandemic- global health concerns and counteracting measures.

Authors:  Ranjit Sah; Aroop Mohanty; Abdullah Reda; Abdelmonem Siddiq; Ranjan K Mohapatra; Kuldeep Dhama
Journal:  Vet Q       Date:  2022-12       Impact factor: 8.071

Review 7.  Discovery of Antivirals Using Phage Display.

Authors:  Esen Sokullu; Marie-Soleil Gauthier; Benoit Coulombe
Journal:  Viruses       Date:  2021-06-10       Impact factor: 5.048

  7 in total

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