Literature DB >> 31115252

Equitable Thresholding and Clustering: A Novel Method for Functional Magnetic Resonance Imaging Clustering in AFNI.

Robert W Cox1.   

Abstract

This article describes a hybrid method to threshold functional magnetic resonance imaging (FMRI) group statistical maps derived from voxel-wise second-level statistical analyses. The proposed "Equitable Thresholding and Clustering" (ETAC) approach seeks to reduce the dependence of clustering results on arbitrary parameter values by using multiple subtests, each equivalent to a standard FMRI clustering analysis, to make decisions about which groups of voxels are potentially significant. The union of these subtest results decides which voxels are accepted. The approach adjusts the cluster-thresholding parameter of each subtest in an equitable way, so that the individual false-positive rates (FPRs) are balanced across subtests to achieve a desired final FPR (e.g., 5%). ETAC utilizes resampling methods to estimate the FPR and thus does not rely on parametric assumptions about the spatial correlation of FMRI noise. The approach was validated with pseudotask timings in resting-state brain data. In addition, a task FMRI data collection was used to compare ETACs true positive detection power versus a standard cluster detection method, demonstrating that ETAC is able to detect true results and control false positives while reducing reliance on arbitrary analysis parameters.

Keywords:  FMRI; clustering; false-positive rates; group analysis

Mesh:

Year:  2019        PMID: 31115252      PMCID: PMC6727468          DOI: 10.1089/brain.2019.0666

Source DB:  PubMed          Journal:  Brain Connect        ISSN: 2158-0014


  16 in total

1.  Cluster failure or power failure? Evaluating sensitivity in cluster-level inference.

Authors:  Stephanie Noble; Dustin Scheinost; R Todd Constable
Journal:  Neuroimage       Date:  2019-12-15       Impact factor: 6.556

2.  Reorganization of the Neurobiology of Language After Sentence Overlearning.

Authors:  Jeremy I Skipper; Sarah Aliko; Stephen Brown; Yoon Ju Jo; Serena Lo; Emilia Molimpakis; Daniel R Lametti
Journal:  Cereb Cortex       Date:  2022-05-31       Impact factor: 4.861

3.  Human brain activity and functional connectivity as memories age from one hour to one month.

Authors:  Catherine W Tallman; Robert E Clark; Christine N Smith
Journal:  Cogn Neurosci       Date:  2022-01-24       Impact factor: 2.550

4.  Handling Multiplicity in Neuroimaging Through Bayesian Lenses with Multilevel Modeling.

Authors:  Gang Chen; Yaqiong Xiao; Paul A Taylor; Justin K Rajendra; Tracy Riggins; Fengji Geng; Elizabeth Redcay; Robert W Cox
Journal:  Neuroinformatics       Date:  2019-10

5.  Detecting the Inverted-U in fMRI Studies of Schizophrenia: A Comparison of Three Analysis Methods.

Authors:  Michael L Thomas; John R Duffy; Neal Swerdlow; Gregory A Light; Gregory G Brown
Journal:  J Int Neuropsychol Soc       Date:  2021-05-05       Impact factor: 2.892

6.  Cerebrovascular Responses to O2-CO2 Exchange Ratio under Brief Breath-Hold Challenge in Patients with Chronic Mild Traumatic Brain Injury.

Authors:  Suk-Tak Chan; Cora Ordway; Ronald J Calvanio; Ferdinando S Buonanno; Bruce R Rosen; Kenneth K Kwong
Journal:  J Neurotrauma       Date:  2021-07-22       Impact factor: 4.869

7.  A comprehensive macaque fMRI pipeline and hierarchical atlas.

Authors:  Benjamin Jung; Paul A Taylor; Jakob Seidlitz; Caleb Sponheim; Pierce Perkins; Leslie G Ungerleider; Daniel Glen; Adam Messinger
Journal:  Neuroimage       Date:  2021-03-28       Impact factor: 7.400

8.  Spatial Information of Somatosensory Stimuli in the Brain: Multivariate Pattern Analysis of Functional Magnetic Resonance Imaging Data.

Authors:  In-Seon Lee; Won-Mo Jung; Hi-Joon Park; Younbyoung Chae
Journal:  Neural Plast       Date:  2020-06-29       Impact factor: 3.599

9.  Cluster failure revisited: Impact of first level design and physiological noise on cluster false positive rates.

Authors:  Anders Eklund; Hans Knutsson; Thomas E Nichols
Journal:  Hum Brain Mapp       Date:  2018-10-15       Impact factor: 5.038

Review 10.  Improving practices and inferences in developmental cognitive neuroscience.

Authors:  John C Flournoy; Nandita Vijayakumar; Theresa W Cheng; Danielle Cosme; Jessica E Flannery; Jennifer H Pfeifer
Journal:  Dev Cogn Neurosci       Date:  2020-06-30       Impact factor: 6.464

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.