| Literature DB >> 31114208 |
Yue-Long Xu1, Yuan-Yuan Hu2, Ji-Wei Li1, Lan Zhou3, Li Li1, Yu-Ming Niu2.
Abstract
Introduction: Recently, molecular epidemiological studies have suggested that aldehyde dehydrogenase 2 (ALDH2) rs671 G>A polymorphism may be a risk factor for ischemic stroke (IS). However, the results reported have not been consistent.Entities:
Keywords: aldehyde dehydrogenase 2; ischemic stroke; meta-analysis; polymorphism; rs671
Year: 2019 PMID: 31114208 PMCID: PMC6497503 DOI: 10.2147/NDT.S196175
Source DB: PubMed Journal: Neuropsychiatr Dis Treat ISSN: 1176-6328 Impact factor: 2.570
Scale for quality evaluation
| Criteria | Score |
|---|---|
| Consecutive/randomly selected cases with clearly defined sampling frame | 2 |
| Not consecutive/randomly selected case or without clearly defined sampling frame | 1 |
| Not described | 0 |
| Population-based | 2 |
| Hospital-bases or Not described | 1 |
| Hardy-Weinberg equilibrium | 2 |
| Hardy-Weinberg disequilibrium | 1 |
| Not available | 0 |
| Genotyping done under “blinded” condition and repeated again | 2 |
| Genotyping done under “blinded” condition or repeated again | 1 |
| Unblinded done or not mentioned and unrepeated | 0 |
| Number >500 | 1 |
| Number <500 | 0 |
| Assess association between genotypes and ischemic stroke with appropriate statistics and adjustment for confounders | 2 |
| Assess association between genotypes and ischemic stroke with appropriate statistics and without adjustment for confounders | 1 |
| Inappropriate statistics used | 0 |
Figure 1Flow diagram of the study selection process.
Characteristics of case-control studies on ALDH2 rs671G>A polymorphism and ischemic stroke risk included in the meta-analysis
| First author | Year | Control design | Genotype method | Case | Control | Genotype distribution | P for | MAF | NOS evaluation | Adjusted factors | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Case | Control | ||||||||||||||
| GG | GA | AA | GG | GA | AA | ||||||||||
| Sun HL | 2012 | HB | PCR-RFLP | 78 | 80 | 27 | 44 | 7 | 49 | 28 | 3 | 0.68 | 0.21 | 7 | Age, gender, smoking and alcohol status, total cholesterol, HDLC |
| Xu XJ | 2012 | PB | PCR-microarray | 100 | 50 | 82 | 16 | 2 | 29 | 19 | 2 | 0.61 | 0.23 | 8 | Age, gender, TC, glucose, LDLC, HDLC, ApoA1, ApoB100l |
| Zhang CY | 2014 | NA | PCR- sequencing | 53 | 106 | 27 | 24 | 2 | 73 | 32 | 1 | 0.21 | 0.16 | 6 | Age, gender, smoking status, TC, TG, LDL |
| Zhou Q | 2014 | PB | PCR- sequencing | 117 | 148 | 96 | 19 | 2 | 138 | 10 | 0 | 0.67 | 0.03 | 8 | Age, gender, smoking and alcohol status, BP, DM, heart disease |
| Wang GY | 2014 | HB | PCR- sequencing | 156 | 160 | 80 | 67 | 9 | 110 | 47 | 3 | 0.43 | 0.17 | 8 | Age, gender, height, weight, BP, DM |
| Li QY | 2015 | HB | PCR- sequencing | 369 | 247 | 619b | 119c | 431b | 63c | NA | 0.13 | 7 | Age, BMI, BP, DM, tobacco habits, alcohol consumption | ||
| Sung YF | 2016 | HB | PCR-APLP | 914 | 746 | 474 | 338 | 102 | 389 | 303 | 54 | 0.63 | 0.28 | 9 | Age, BMI, BP, DM, hypercholesterolemia, coronary artery disease, atrial fibrillation, smoking, alcohol drinking and history |
| Qu Y | 2017 | PB | PCR- sequencing | 394 | 406 | 254 | 120 | 20 | 264 | 128 | 14 | 0.75 | 0.19 | 9 | Age, gender, smoking and alcohol status, DM, TC, TG, LDLC, HDLC, UA |
| Sun S | 2017 | HB | MassARRAY | 488 | 503 | 369 | 108 | 11 | 371 | 124 | 8 | 0.52 | 0.14 | 8 | Age, gender, smoking and alcohol status, residential region, ethnicity and family history |
Notes: aHWE in control. b: only the G-allele were collected; c: only the A-allele were collected.
Abbreviations: NOS, Newcastle-Ottawa scale; HB, hospital based; PB, population based; MAF, minor allele frequency in control group; NA, not available; HDLC, high-density lipoprotein cholesterol; TC, total cholesterol; LDLC, low density lipoprotein cholesterol; ApoA1, apolipoproteinA1; ApoB100, apolipoproteinB100; TG, three acylglycerol; DM, diabetes mellitus; BP, blood pressure; BMI, body mass index; UA, uric acid.
Figure 2OR and 95% CIs of the associations between ALDH2 rs671G>A polymorphism and ischemic stroke risk in AA vs GG model.
Figure S1OR and 95% CIs of the associations between ALDH2 rs671G>A polymorphism and ischemic stroke risk (A for A vs G model; B for GA vs GG model; C for GA + AA vs GG model; D for AA vs GG + GA model).
Summary ORs and 95% CI of ALDH2 rs671G>A polymorphism and ischemic stroke risk
| N* | A vs G | GA vs GG | AA vs GG | GA+AA vs GG | AA vs GG+GA | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| OR | 95% CI | OR | 95% CI | OR | 95% CI | OR | 95% CI | OR | 95% CI | ||||||||||||
| Total | 9 | 1.29 | 1.01–1.65 | 0.04 | 78.2 | 1.24 | 0.87–1.76 | 0.23 | 81.3 | 1.68 | 1.27–2.21 | <0.01 | 11.3 | 1.31 | 0.93–1.86 | 0.13 | 82.6 | 1.67 | 1.27–2.19 | <0.01 | 0 |
| Design | |||||||||||||||||||||
| HB | 5 | 1.34 | 1.03–1.73 | 0.03 | 74.0 | 1.34 | 0.86–2.09 | 0.20 | 83.8 | 1.71 | 1.25–2.34 | <0.01 | 18.9 | 1.42 | 0.92–2.21 | 0.11 | 84.3 | 1.68 | 1.24–2.29 | <0.01 | 0.0 |
| PB | 3 | 1.06 | 0.42–2.67 | 0.91 | 88.5 | 0.93 | 0.35–2.47 | 0.88 | 86.6 | 1.43 | 0.76–2.30 | 0.27 | 32.2 | 0.98 | 0.35–2.70 | 0.96 | 88.2 | 1.41 | 0.70–2.86 | 0.24 | 3.6 |
| NA | 1 | 1.88 | 1.07–3.31 | 0.03 | NA | 2.03 | 1.02–4.04 | 0.04 | NA | 5.41 | 0.47–62.08 | 0.18 | NA | 2.13 | 1.08–4.19 | 0.03 | NA | 4.12 | 0.36–46.48 | 0.25 | NA |
| Subjects | |||||||||||||||||||||
| <500 | 5 | 1.56 | 0.85–2.87 | 0.15 | 83.6 | 1.59 | 0.78–3.24 | 0.21 | 82.6 | 3.05 | 1.14–6.61 | 0.01 | 25.2 | 1.67 | 0.80–3.49 | 0.17 | 84.5 | 2.45 | 1.14–5.26 | 0.02 | 0 |
| >500 | 4 | 1.09 | 0.98–1.22 | 0.12 | 0 | 0.92 | 0.79–1.06 | 0.26 | 0 | 1.52 | 1.13–2.05 | 0.01 | 0 | 0.99 | 0.86–1.44 | 0.87 | 0 | 1.57 | 1.17–2.11 | <0.01 | 0 |
| NOS evaluation | |||||||||||||||||||||
| NOS ≥8 | 6 | 1.14 | 0.85–1.53 | 0.39 | 81.1 | 1.04 | 0.73–1.46 | 0.85 | 79.4 | 1.59 | 1.19–2.11 | <0.01 | 3.7 | 1.10 | 0.77–1.56 | 0.60 | 81.4 | 1.60 | 1.21–2.13 | <0.01 | 0.0 |
| NOS <8 | 3 | 1.59 | 1.24–2.04 | <0.01 | 37.6 | 2.42 | 1.50–3.91 | <0.01 | 0 | 4.49 | 1.30–15.47 | 0.02 | 0 | 2.54 | 1.59–4.06 | <0.01 | 0 | 2.85 | 0.85–9.54 | 0.09 | 0.0 |
Notes: *Numbers of comparisons. I for Heterogeneity test.
Abbreviations: HB, hospital based; PB, population based; NA, not available; NOS, Newcastle-Ottawa scale.
Figure 3Cumulative meta-analyses according to publication year in AA vs GG model of ALDH2 rs671G>A polymorphism.
Figure S2Cumulative meta-analyses according to publication year in ALDH2 rs671G>A polymorphism and ischemic stroke risk (A for A vs G model; B for GA vs GG model; C for GA + AA vs GG model; D for AA vs GG + GA model).
Figure 4Sensitivity analysis involving deletion of each study to reflect the influence of the individual dataset to the pooled ORs in AA vs GG model of ALDH2 rs671G>A polymorphism.
Figure S3Sensitivity analysis through deleting each study to reflect the influence of the individual dataset to the pooled ORs in ALDH2 rs671G>A polymorphism and ischemic stroke risk (A for A vs G model; B for GA vs GG model; C for GA + AA vs GG model; D for AA vs GG + GA model).
Figure 5Funnel plot analysis to detect publication bias for AA vs GG model of ALDH2 rs671G>A polymorphism. Circles represent the weight of the studies.
Figure S4Funnel plot analysis to detect publication bias in ALDH2 rs671G>A polymorphism (A for A vs G model; B for GA vs GG model; C for GA + AA vs GG model; D for AA vs GG + GA model). Circles represent the weight of the studies.