Literature DB >> 31113731

Deep learning-based quality control of cultured human-induced pluripotent stem cell-derived cardiomyocytes.

Ken Orita1, Kohei Sawada1, Ryuta Koyama1, Yuji Ikegaya2.   

Abstract

Using bright-field images of cultured human-induced pluripotent stem cell-derived cardiomyocytes (hiPSC-CMs), we trained a convolutional neural network (CNN), a machine learning technique, to decide whether the qualities of cell cultures are suitable for experiments. VGG16, an open-source CNN framework, resulted in a mean F1 score of 0.89 and judged the cell qualities at a speed of approximately 2000 images per second when run on a commercially available laptop computer equipped with Core i7. Thus, CNNs provide a useful platform for the high-throughput quality control of hiPSC-CMs.
Copyright © 2019 The Authors. Production and hosting by Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Heart; Machine learning; iPSC

Mesh:

Year:  2019        PMID: 31113731     DOI: 10.1016/j.jphs.2019.04.008

Source DB:  PubMed          Journal:  J Pharmacol Sci        ISSN: 1347-8613            Impact factor:   3.337


  5 in total

1.  Temporal and Locational Values of Images Affecting the Deep Learning of Cancer Stem Cell Morphology.

Authors:  Yumi Hanai; Hiroaki Ishihata; Zaijun Zhang; Ryuto Maruyama; Tomonari Kasai; Hiroyuki Kameda; Tomoyasu Sugiyama
Journal:  Biomedicines       Date:  2022-04-19

Review 2.  Moving Towards Induced Pluripotent Stem Cell-based Therapies with Artificial Intelligence and Machine Learning.

Authors:  Claudia Coronnello; Maria Giovanna Francipane
Journal:  Stem Cell Rev Rep       Date:  2021-11-29       Impact factor: 5.739

Review 3.  Bioengineering Strategies to Create 3D Cardiac Constructs from Human Induced Pluripotent Stem Cells.

Authors:  Fahimeh Varzideh; Pasquale Mone; Gaetano Santulli
Journal:  Bioengineering (Basel)       Date:  2022-04-10

4.  Machine Learning Techniques to Classify Healthy and Diseased Cardiomyocytes by Contractility Profile.

Authors:  Diogo Teles; Youngbin Kim; Kacey Ronaldson-Bouchard; Gordana Vunjak-Novakovic
Journal:  ACS Biomater Sci Eng       Date:  2021-06-21

5.  Reproducible production and image-based quality evaluation of retinal pigment epithelium sheets from human induced pluripotent stem cells.

Authors:  Ke Ye; Yuto Takemoto; Arisa Ito; Masanari Onda; Nao Morimoto; Michiko Mandai; Masayo Takahashi; Ryuji Kato; Fumitaka Osakada
Journal:  Sci Rep       Date:  2020-09-01       Impact factor: 4.379

  5 in total

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