Literature DB >> 31113334

Modelling and measuring intracellular competition for finite resources during gene expression.

Renana Sabi1, Tamir Tuller1,2.   

Abstract

Dissecting the competition between genes for shared expressional resources is of fundamental importance for understanding the interplay between cellular components. Owing to the relationship between gene expression and cellular fitness, genomes are shaped by evolution to improve resource allocation. Whereas experimental approaches to investigate intracellular competition require technical resources and human expertise, computational models and in silico simulations allow vast numbers of experiments to be carried out and controlled easily, and with significantly reduced costs. Thus, modelling competition has a pivotal role in understanding the effects of competition on the biophysics of the cell. In this article, we review various computational models proposed to describe the different types of competition during gene expression. We also present relevant synthetic biology experiments and their biotechnological implications, and discuss the open questions in the field.

Entities:  

Keywords:  computational and mathematical models; finite resources; gene expression; intracellular competition; synthetic biology; systems biology

Mesh:

Year:  2019        PMID: 31113334      PMCID: PMC6544899          DOI: 10.1098/rsif.2018.0887

Source DB:  PubMed          Journal:  J R Soc Interface        ISSN: 1742-5662            Impact factor:   4.118


  94 in total

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