Literature DB >> 31112349

Mechanical Activation Drastically Accelerates Amide Bond Hydrolysis, Matching Enzyme Activity.

Michael F Pill1,2, Allan L L East3, Dominik Marx4, Martin K Beyer5, Hauke Clausen-Schaumann1,2.   

Abstract

Amide bonds, which include peptide bonds connecting amino acids in proteins and polypeptides, give proteins and synthetic polyamides their enormous strength. Although proteins and polyamides sustain mechanical force in nature and technology, how forces affect amide and peptide bond stability is still unknown. Using single-molecule force spectroscopy, we discover that forces of only a few hundred pN accelerate amide hydrolysis 109 -fold, an acceleration hitherto only known from proteolytic enzymes. The drastic acceleration at low force precedes a moderate additional acceleration at nN forces. Quantum mechanochemical ab initio calculations explain these experimental results mechanistically and kinetically. Our findings reveal that, in contrast to previous belief, amide stability is strongly force dependent. These calculations provide a fundamental understanding of the role of mechanical activation in amide hydrolysis and point the way to potential applications from the recycling of macromolecular waste to the design of bioengineered proteolytic enzymes.
© 2019 Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim.

Entities:  

Keywords:  ab initio calculations; mechanical properties; peptides; proteins; single-molecule studies

Year:  2019        PMID: 31112349     DOI: 10.1002/anie.201902752

Source DB:  PubMed          Journal:  Angew Chem Int Ed Engl        ISSN: 1433-7851            Impact factor:   15.336


  4 in total

1.  Single-Molecule Force Spectroscopy Reveals Stability of mitoNEET and its [2Fe2Se] Cluster in Weakly Acidic and Basic Solutions.

Authors:  Jing-Yuan Nie; Guo-Bin Song; Yi-Bing Deng; Peng Zheng
Journal:  ChemistryOpen       Date:  2022-05       Impact factor: 2.630

2.  Enzymatic Construction of Protein Polymer/Polyprotein Using OaAEP1 and TEV Protease.

Authors:  Yibing Deng; Shengchao Shi; Bin Zheng; Tao Wu; Peng Zheng
Journal:  Bio Protoc       Date:  2020-04-20

3.  Interdomain Linker Effect on the Mechanical Stability of Ig Domains in Titin.

Authors:  Bei Tong; Fang Tian; Peng Zheng
Journal:  Int J Mol Sci       Date:  2022-08-30       Impact factor: 6.208

Review 4.  Novel Methodologies for Chemical Activation in Organic Synthesis under Solvent-Free Reaction Conditions.

Authors:  Claudia Gabriela Avila-Ortiz; Eusebio Juaristi
Journal:  Molecules       Date:  2020-08-06       Impact factor: 4.411

  4 in total

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