Literature DB >> 31105051

Circulating cell-free DNA integrity as a diagnostic and prognostic marker for breast and prostate cancers.

Benjamin Arko-Boham1, Nii Ayite Aryee2, Richard Michael Blay3, Ewurama Dedea Ampadu Owusu4, Emmanuel Ayitey Tagoe5, Eshirow-Sam Doris Shackie6, Ama Boatemaa Debrah6, Nii Armah Adu-Aryee7.   

Abstract

BACKGROUND: Cancer incidence and its related mortality is rising and is currently the second leading cause of death globally. In Africa, breast and prostate cancer in females and males, respectively, are the worst globally. However, biomarkers for their early detection and prognosis are not well developed. This study sought to investigate circulating cell-free DNA (ccfDNA) integrity and its potential utility as diagnostic and/or prognostic biomarker. Circulating cell-free DNA (ccfDNA) is degraded DNA fragments released into the blood plasma. In healthy individuals, the source of ccfDNA is solely apoptosis, producing evenly sized shorter DNA fragments. In cancer patients, however, necrosis produces uneven longer cell-free DNA fragments in addition to the shorter fragments originating from apoptosis. DNA integrity, expressed as the ratio of longer fragments to total DNA, may be clinically useful for the detection of breast and prostate cancer progression.
METHODS: Sixty-four (64) females, consisting of 32 breast cancer patients and 32 controls, and 61 males (31 prostate cancer patients and 30 controls) were included in the study. Each participant donated 5 ml peripheral blood from which sera were separated. Real-time qPCR was performed on the sera to quantify ALU 115 and 247 levels, and DNA integrity (ALU247/ALU115) determined. RESULTS &
CONCLUSION: ALU species 115 and 247 levels in serum were elevated in breast and prostate cancer patients compared to their counterpart healthy controls. DNA integrity was higher in prostate cancer patients than in the control, but in breast cancer patients was lower compared to their controls. In prostate but not in breast cancers, DNA integrity increased with disease severity and higher staging.
Copyright © 2019. Published by Elsevier Inc.

Entities:  

Keywords:  Breast cancer; Circulating cell-free DNA; DNA integrity; Prostate cancer

Year:  2019        PMID: 31105051     DOI: 10.1016/j.cancergen.2019.04.062

Source DB:  PubMed          Journal:  Cancer Genet


  17 in total

1.  Circulating Cell-free DNA in Serum as a Marker for the Early Detection of Tumor Recurrence in Breast Cancer Patients.

Authors:  Alakesh Bera; Eric Russ; John Karaian; Adam Landa; Surya Radhakrishnan; Madhan Subramanian; Matthew Hueman; Harvey B Pollard; Hai Hu; Craig D Shriver; Meera Srivastava
Journal:  Cancer Diagn Progn       Date:  2022-05-03

Review 2.  The Utility of Repetitive Cell-Free DNA in Cancer Liquid Biopsies.

Authors:  Ugur Gezer; Abel J Bronkhorst; Stefan Holdenrieder
Journal:  Diagnostics (Basel)       Date:  2022-06-01

3.  Combining copy number, methylation markers, and mutations as a panel for endometrial cancer detection via intravaginal tampon collection.

Authors:  Ajleeta Sangtani; Chen Wang; Amy Weaver; Nicole L Hoppman; Sarah E Kerr; Alexej Abyzov; Viji Shridhar; Julie Staub; Jean-Pierre A Kocher; Jesse S Voss; Karl C Podratz; Nicolas Wentzensen; John B Kisiel; Mark E Sherman; Jamie N Bakkum-Gamez
Journal:  Gynecol Oncol       Date:  2019-11-28       Impact factor: 5.482

4.  Relationship between plasma cell-free DNA (cfDNA) and prognosis of TACE for primary hepatocellular carcinoma.

Authors:  Kun Ma; Jiayun Liu; Youjin Wang; Yubin Zhong; Zhenfeng Wu; Ruiying Fan; Shanfeng Guo
Journal:  J Gastrointest Oncol       Date:  2020-12

5.  Fragmentation Analysis of Plasma DNA Reveals Its Prognostic Value in Gastric Cancer.

Authors:  Ebru Esin Yoruker; Emre Ozgur; Metin Keskin; Ilker Ozgur; Ugur Gezer
Journal:  Turk J Gastroenterol       Date:  2021-09       Impact factor: 1.555

6.  Evaluating the quantity, quality and size distribution of cell-free DNA by multiplex droplet digital PCR.

Authors:  Miguel Alcaide; Matthew Cheung; Jack Hillman; S Rod Rassekh; Rebecca J Deyell; Gerald Batist; Aly Karsan; Alexander W Wyatt; Nathalie Johnson; David W Scott; Ryan D Morin
Journal:  Sci Rep       Date:  2020-07-28       Impact factor: 4.379

Review 7.  Circulating-Free DNA Analysis in Hepatocellular Carcinoma: A Promising Strategy to Improve Patients' Management and Therapy Outcomes.

Authors:  Silvia Mezzalira; Elena De Mattia; Michela Guardascione; Chiara Dalle Fratte; Erika Cecchin; Giuseppe Toffoli
Journal:  Int J Mol Sci       Date:  2019-11-05       Impact factor: 5.923

8.  Molecular characterization of advanced non-small cell lung cancer patients by cfDNA analysis: experience from routine laboratory practice.

Authors:  José Manuel González de Aledo-Castillo; Ainara Arcocha; Iván Victoria; Ana Isabel Martinez-Puchol; Cristina Sánchez; Pedro Jares; Gabriel Felipe Rodríguez; Núria Viñolas; Roxana Reyes; Noemí Reguart; Joan Antón Puig-Butillé
Journal:  J Thorac Dis       Date:  2021-03       Impact factor: 2.895

9.  Characterization of Plasma Cell-Free DNA Integrity Using Droplet-Based Digital PCR: Toward the Development of Circulating Tumor DNA-Dedicated Assays.

Authors:  Geoffroy Poulet; Fanny Garlan; Sonia Garrigou; Eleonora Zonta; Leonor Benhaim; Marie-Jennifer Carrillon; Audrey Didelot; Delphine Le Corre; Claire Mulot; Philippe Nizard; Frederic Ginot; Audrey Boutonnet-Rodat; Helene Blons; Jean-Baptiste Bachet; Julien Taïeb; Aziz Zaanan; Vanna Geromel; Laurence Pellegrina; Pierre Laurent-Puig; Shu-Fang Wang-Renault; Valerie Taly
Journal:  Front Oncol       Date:  2021-05-06       Impact factor: 6.244

10.  Identification and characterization of extrachromosomal circular DNA in maternal plasma.

Authors:  Sarah T K Sin; Peiyong Jiang; Jiaen Deng; Lu Ji; Suk Hang Cheng; Anindya Dutta; Tak Y Leung; K C Allen Chan; Rossa W K Chiu; Y M Dennis Lo
Journal:  Proc Natl Acad Sci U S A       Date:  2020-01-03       Impact factor: 11.205

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