Literature DB >> 31104480

Transcriptome Analysis Reveals Novel Genes Associated with Cartilage Degeneration in Posttraumatic Osteoarthritis Progression.

Chih-Chung Liu1,2, Hoong-Chien Lee3,4, Yi-Shian Peng3, Ailun Heather Tseng5, Jia-Lin Wu6,7, Wei-Yuan Tsai8, Chih-Shung Wong8,9, Li-Jen Su3.   

Abstract

OBJECTIVE: The current therapeutic strategy for posttraumatic osteoarthritis (PTOA) focuses on early intervention to attenuate disease progression, preserve joint function, and defer joint replacement timing. Sequential transcriptomic changes of articular cartilage in a rat model were investigated to explore the molecular mechanism in early PTOA progression.
DESIGN: Anterior cruciate ligament transection and medial meniscectomy (ACLT + MMx)-induced PTOA model was applied on male Wistar rats. Articular cartilages were harvested at time 0 (naïve), 2 week, and 4 weeks after surgery. Affymetrix Rat genome 230 2.0 array was utilized to analyze the gene expression changes of articular cartilages.
RESULTS: We identified 849 differentially expressed genes (DEGs) at 2 weeks and 223 DEGs at 4 weeks post-ACLT + MMx surgery compared with time 0 (naïve group). Gene ontology and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analysis were performed to gain further insights from these DEGs. 22 novel genes and 1 novel KEGG pathway (axon guidance) in cartilage degeneration of osteoarthritis were identified. Axon guidance molecules-Gnai1, Sema4d, Plxnb1, and Srgap2 commonly dysregulated in PTOA progression. Gnai1 gene showed a concordant change in protein expression by immunohistochemistry staining.
CONCLUSIONS: Our study identified 22 novel dysregulated genes and axon guidance pathway associated with articular cartilage degeneration in PTOA progression. These findings provide the potential candidates of biomarkers and therapeutic targets for further investigation.

Entities:  

Keywords:  axon guidance; cartilage degeneration; posttraumatic osteoarthritis; transcriptome analysis

Mesh:

Year:  2019        PMID: 31104480      PMCID: PMC8804845          DOI: 10.1177/1947603519847744

Source DB:  PubMed          Journal:  Cartilage        ISSN: 1947-6035            Impact factor:   3.117


  59 in total

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Journal:  Osteoarthritis Cartilage       Date:  2010-09-15       Impact factor: 6.576

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Authors:  Tadashi Hayami; Ya Zhuo; Gregg A Wesolowski; Maureen Pickarski; Le T Duong
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4.  Plexin-B1 directly interacts with PDZ-RhoGEF/LARG to regulate RhoA and growth cone morphology.

Authors:  Jakub M Swiercz; Rohini Kuner; Jürgen Behrens; Stefan Offermanns
Journal:  Neuron       Date:  2002-07-03       Impact factor: 17.173

5.  Proteomic analysis of human osteoarthritic chondrocytes reveals protein changes in stress and glycolysis.

Authors:  Cristina Ruiz-Romero; Vanessa Carreira; Ignacio Rego; Silvia Remeseiro; María J López-Armada; Francisco J Blanco
Journal:  Proteomics       Date:  2008-02       Impact factor: 3.984

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Authors:  Teresa I Morales
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7.  Shroom2 regulates contractility to control endothelial morphogenesis.

Authors:  Matthew J Farber; Ryan Rizaldy; Jeffrey D Hildebrand
Journal:  Mol Biol Cell       Date:  2011-01-19       Impact factor: 4.138

8.  Chemokine expression in peripheral tissues from the monosodium iodoacetate model of chronic joint pain.

Authors:  John M Dawes; Hannes Kiesewetter; James R Perkins; David L H Bennett; Stephen B McMahon
Journal:  Mol Pain       Date:  2013-11-08       Impact factor: 3.395

9.  A whole-genome transcriptome analysis of articular chondrocytes in secondary osteoarthritis of the hip.

Authors:  Takashi Aki; Ko Hashimoto; Masanori Ogasawara; Eiji Itoi
Journal:  PLoS One       Date:  2018-06-26       Impact factor: 3.240

10.  The Gene Ontology project in 2008.

Authors: 
Journal:  Nucleic Acids Res       Date:  2007-11-04       Impact factor: 16.971

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2.  Synovial fluid proteome profile of surgical versus chemical induced osteoarthritis in rabbits.

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