Literature DB >> 31102135

The Multistationarity Structure of Networks with Intermediates and a Binomial Core Network.

AmirHosein Sadeghimanesh1, Elisenda Feliu2.   

Abstract

This work addresses whether a reaction network, taken with mass-action kinetics, is multistationary, that is, admits more than one positive steady state in some stoichiometric compatibility class. We build on previous work on the effect that removing or adding intermediates has on multistationarity, and also on methods to detect multistationarity for networks with a binomial steady-state ideal. In particular, we provide a new determinant criterion to decide whether a network is multistationary, which applies when the network obtained by removing intermediates has a binomial steady-state ideal. We apply this method to easily characterize which subsets of complexes are responsible for multistationarity; this is what we call the multistationarity structure of the network. We use our approach to compute the multistationarity structure of the n-site sequential distributive phosphorylation cycle for arbitrary n.

Keywords:  Binomial ideal; Determinant criterion; Model reduction; Multistationarity; Phosphorylation cycle; Toric ideal

Mesh:

Year:  2019        PMID: 31102135     DOI: 10.1007/s11538-019-00612-1

Source DB:  PubMed          Journal:  Bull Math Biol        ISSN: 0092-8240            Impact factor:   1.758


  2 in total

1.  Oscillations and bistability in a model of ERK regulation.

Authors:  Nida Obatake; Anne Shiu; Xiaoxian Tang; Angélica Torres
Journal:  J Math Biol       Date:  2019-07-25       Impact factor: 2.259

2.  Polynomial superlevel set representation of the multistationarity region of chemical reaction networks.

Authors:  AmirHosein Sadeghimanesh; Matthew England
Journal:  BMC Bioinformatics       Date:  2022-09-27       Impact factor: 3.307

  2 in total

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