Literature DB >> 31097994

Simplifying the Chemical Structure of Cationic Lipids for siRNA-Lipid Nanoparticles.

Takeshi Kuboyama1, Kaori Yagi1, Tomoyuki Naoi1, Tomohiro Era1, Nobuhiro Yagi1, Yoshisuke Nakasato1, Hayato Yabuuchi1, Saori Takahashi1, Fumikazu Shinohara1, Hiroto Iwai1, Ayumi Koubara-Yamada1, Kazumasa Hasegawa1, Atsushi Miwa1.   

Abstract

We report a potent cationic lipid, SST-02 ((3-hydroxylpropyl)dilinoleylamine), which possesses a simple chemical structure and is synthesized just in one step. Cationic lipids are key components of siRNA-lipid nanoparticles (LNP), which may serve as potential therapeutic agents for various diseases. For a decade, chemists have given enhanced potency and new functions to cationic lipids along with structural complexity. In this study, we conducted a medicinal chemistry campaign pursuing chemical simplicity and found that even dilinoleylmethylamine (SST-01) and methylpalmitoleylamine could be used for the in vitro and in vivo siRNA delivery. Further optimization revealed that a hydroxyl group boosted potency, and SST-02 showed an ID50 of 0.02 mg/kg in the factor VII (FVII) model. Rats administered with 3 mg/kg of SST-02 LNP did not show changes in body weight, blood chemistry, or hematological parameters, while the AST level decreased at a dose of 5 mg/kg. The use of SST-02 avoids a lengthy synthetic route and may thus decrease the future cost of nucleic acid therapeutics.

Entities:  

Year:  2019        PMID: 31097994      PMCID: PMC6511965          DOI: 10.1021/acsmedchemlett.8b00652

Source DB:  PubMed          Journal:  ACS Med Chem Lett        ISSN: 1948-5875            Impact factor:   4.345


  22 in total

1.  Synthetic dsRNA Dicer substrates enhance RNAi potency and efficacy.

Authors:  Dong-Ho Kim; Mark A Behlke; Scott D Rose; Mi-Sook Chang; Sangdun Choi; John J Rossi
Journal:  Nat Biotechnol       Date:  2004-12-26       Impact factor: 54.908

2.  Design of noninflammatory synthetic siRNA mediating potent gene silencing in vivo.

Authors:  Adam D Judge; Gurneet Bola; Amy C H Lee; Ian MacLachlan
Journal:  Mol Ther       Date:  2005-12-15       Impact factor: 11.454

3.  Interaction of cholesterol-conjugated ionizable amino lipids with biomembranes: lipid polymorphism, structure-activity relationship, and implications for siRNA delivery.

Authors:  Jingtao Zhang; Haihong Fan; Dorothy A Levorse; Louis S Crocker
Journal:  Langmuir       Date:  2011-06-29       Impact factor: 3.882

4.  Duplexes of 21-nucleotide RNAs mediate RNA interference in cultured mammalian cells.

Authors:  S M Elbashir; J Harborth; W Lendeckel; A Yalcin; K Weber; T Tuschl
Journal:  Nature       Date:  2001-05-24       Impact factor: 49.962

5.  Cationic lipid saturation influences intracellular delivery of encapsulated nucleic acids.

Authors:  James Heyes; Lorne Palmer; Kaz Bremner; Ian MacLachlan
Journal:  J Control Release       Date:  2005-10-03       Impact factor: 9.776

6.  Differential efficacy of DOTAP enantiomers for siRNA delivery in vitro.

Authors:  Megan Cavanaugh Terp; Finn Bauer; Yasuro Sugimoto; Bo Yu; Robert W Brueggemeier; L James Lee; Robert J Lee
Journal:  Int J Pharm       Date:  2012-04-15       Impact factor: 5.875

7.  Rational design of cationic lipids for siRNA delivery.

Authors:  Sean C Semple; Akin Akinc; Jianxin Chen; Ammen P Sandhu; Barbara L Mui; Connie K Cho; Dinah W Y Sah; Derrick Stebbing; Erin J Crosley; Ed Yaworski; Ismail M Hafez; J Robert Dorkin; June Qin; Kieu Lam; Kallanthottathil G Rajeev; Kim F Wong; Lloyd B Jeffs; Lubomir Nechev; Merete L Eisenhardt; Muthusamy Jayaraman; Mikameh Kazem; Martin A Maier; Masuna Srinivasulu; Michael J Weinstein; Qingmin Chen; Rene Alvarez; Scott A Barros; Soma De; Sandra K Klimuk; Todd Borland; Verbena Kosovrasti; William L Cantley; Ying K Tam; Muthiah Manoharan; Marco A Ciufolini; Mark A Tracy; Antonin de Fougerolles; Ian MacLachlan; Pieter R Cullis; Thomas D Madden; Michael J Hope
Journal:  Nat Biotechnol       Date:  2010-01-17       Impact factor: 54.908

8.  Development of wrapped liposomes: novel liposomes comprised of polyanion drug and cationic lipid complexes wrapped with neutral lipids.

Authors:  Masahiro Yamauchi; Hiroko Kusano; Etsuko Saito; Takeshi Iwata; Masashi Nakakura; Yasuki Kato; Noboru Aoki
Journal:  Biochim Biophys Acta       Date:  2006-02-02

9.  A nanoparticle system specifically designed to deliver short interfering RNA inhibits tumor growth in vivo.

Authors:  Nobuhiro Yagi; Ichiro Manabe; Tsuneaki Tottori; Atsushi Ishihara; Fusa Ogata; Jong Heon Kim; Satoshi Nishimura; Katsuhito Fujiu; Yumiko Oishi; Keiji Itaka; Yasuki Kato; Masahiro Yamauchi; Ryozo Nagai
Journal:  Cancer Res       Date:  2009-08-04       Impact factor: 12.701

10.  A combinatorial library of lipid-like materials for delivery of RNAi therapeutics.

Authors:  Akin Akinc; Andreas Zumbuehl; Michael Goldberg; Elizaveta S Leshchiner; Valentina Busini; Naushad Hossain; Sergio A Bacallado; David N Nguyen; Jason Fuller; Rene Alvarez; Anna Borodovsky; Todd Borland; Rainer Constien; Antonin de Fougerolles; J Robert Dorkin; K Narayanannair Jayaprakash; Muthusamy Jayaraman; Matthias John; Victor Koteliansky; Muthiah Manoharan; Lubomir Nechev; June Qin; Timothy Racie; Denitza Raitcheva; Kallanthottathil G Rajeev; Dinah W Y Sah; Jürgen Soutschek; Ivanka Toudjarska; Hans-Peter Vornlocher; Tracy S Zimmermann; Robert Langer; Daniel G Anderson
Journal:  Nat Biotechnol       Date:  2008-04-27       Impact factor: 54.908

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  6 in total

Review 1.  Delivery of Oligonucleotide Therapeutics: Chemical Modifications, Lipid Nanoparticles, and Extracellular Vesicles.

Authors:  Jeremy P Bost; Hanna Barriga; Margaret N Holme; Audrey Gallud; Marco Maugeri; Dhanu Gupta; Taavi Lehto; Hadi Valadi; Elin K Esbjörner; Molly M Stevens; Samir El-Andaloussi
Journal:  ACS Nano       Date:  2021-09-10       Impact factor: 15.881

Review 2.  Rationale and Application of PEGylated Lipid-Based System for Advanced Target Delivery of siRNA.

Authors:  Xuemei Ge; Lijuan Chen; Bo Zhao; Weien Yuan
Journal:  Front Pharmacol       Date:  2021-01-20       Impact factor: 5.810

3.  Why the Orientational Mobility in Arginine and Lysine Spacers of Peptide Dendrimers Designed for Gene Delivery Is Different?

Authors:  Valeriy V Bezrodnyi; Oleg V Shavykin; Sofia E Mikhtaniuk; Igor M Neelov; Nadezhda N Sheveleva; Denis A Markelov
Journal:  Int J Mol Sci       Date:  2020-12-21       Impact factor: 5.923

4.  Tyrosine-Modification of Polypropylenimine (PPI) and Polyethylenimine (PEI) Strongly Improves Efficacy of siRNA-Mediated Gene Knockdown.

Authors:  Sandra Noske; Michael Karimov; Achim Aigner; Alexander Ewe
Journal:  Nanomaterials (Basel)       Date:  2020-09-10       Impact factor: 5.076

Review 5.  Non-Viral Delivery of RNA Gene Therapy to the Central Nervous System.

Authors:  Ellen S Hauck; James G Hecker
Journal:  Pharmaceutics       Date:  2022-01-11       Impact factor: 6.321

6.  siRNA potency enhancement via chemical modifications of nucleotide bases at the 5'-end of the siRNA guide strand.

Authors:  Fumikazu Shinohara; Taiji Oashi; Toshimasa Harumoto; Tomoyuki Nishikawa; Yuki Takayama; Hikaru Miyagi; Yuichi Takahashi; Takahiro Nakajima; Takashi Sawada; Yasuo Koda; Asana Makino; Atsuko Sato; Kaori Hamaguchi; Michihiko Suzuki; Junichiro Yamamoto; Yukihide Tomari; Jun-Ichi Saito
Journal:  RNA       Date:  2020-11-11       Impact factor: 4.942

  6 in total

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