| Literature DB >> 31095591 |
Abstract
In this note we present a robust bootstrap test with good Type I error control for testing the general hypothesis H0: ρ = ρ0. In order to carry out this test we use what is termed a surrogate bootstrap distribution. The test was inspired by the studentized permutation for testing H0: ρ = 0, which was proven to be exact in certain scenarios and asymptotically correct overall. We show that the bootstrap based test is robust to a variety of distributional scenarios in terms of proper Type I error control.Entities:
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Year: 2019 PMID: 31095591 PMCID: PMC6522008 DOI: 10.1371/journal.pone.0216287
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.752
Rejection Probabilities at α = 0.05 for bootstrap, asymptotic and Fisher’s z tests for H: ρ = ρ0 versus H1: ρ > ρ0 using the sample correlation coefficient.
| Distribution | Test | ||||||
|---|---|---|---|---|---|---|---|
| 10 | 25 | 50 | 100 | 200 | |||
| MVN | 0.0 | Bootstrap | 0.0533 | 0.0514 | 0.0493 | 0.0464 | 0.0516 |
| Asymptotic | 0.1011 | 0.0698 | 0.0586 | 0.0523 | 0.0543 | ||
| Fisher’s z | 0.0497 | 0.0513 | 0.0510 | 0.0482 | 0.0519 | ||
| Stud Perm | 0.0470 | 0.0525 | 0.0525 | 0.0511 | 0.0561 | ||
| 0.3 | Bootstrap | 0.0571 | 0.0538 | 0.0526 | 0.0533 | 0.0496 | |
| Asymptotic | 0.1076 | 0.0687 | 0.0599 | 0.0551 | 0.0511 | ||
| Fisher’s z | 0.0492 | 0.0477 | 0.0491 | 0.0493 | 0.0483 | ||
| 0.6 | Bootstrap | 0.0641 | 0.0619 | 0.0549 | 0.0571 | 0.0543 | |
| Asymptotic | 0.1136 | 0.0752 | 0.0601 | 0.0591 | 0.0545 | ||
| Fisher’s z | 0.0492 | 0.0474 | 0.0486 | 0.0509 | 0.0494 | ||
| Exponential | 0.0 | Bootstrap | 0.0524 | 0.0461 | 0.0511 | 0.0474 | 0.0504 |
| Asymptotic | 0.0959 | 0.0643 | 0.0603 | 0.0512 | 0.0525 | ||
| Fisher’s z | 0.0279 | 0.0214 | 0.0237 | 0.0231 | 0.0234 | ||
| Stud Perm | 0.0679 | 0.0508 | 0.0476 | 0.0502 | 0.0485 | ||
| 0.3 | Bootstrap | 0.0599 | 0.0545 | 0.0515 | 0.0560 | 0.0542 | |
| Asymptotic | 0.1070 | 0.0725 | 0.0599 | 0.0597 | 0.0565 | ||
| Fisher’s z | 0.0272 | 0.0245 | 0.0223 | 0.0236 | 0.0243 | ||
| 0.6 | Bootstrap | 0.0603 | 0.0604 | 0.0570 | 0.0558 | 0.0529 | |
| Asymptotic | 0.1072 | 0.0761 | 0.0627 | 0.0591 | 0.0533 | ||
| Fisher’s z | 0.0244 | 0.0250 | 0.0222 | 0.0240 | 0.0213 | ||
* Numbers abstracted from DiCiccio and Romano (2017)
Rejection Probabilities at α = 0.05 for bootstrap, asymptotic and Fisher’s z tests for H: ρ = ρ0 versus H1: ρ > ρ0 using the sample correlation coefficient.
| Distribution | Test | ||||||
|---|---|---|---|---|---|---|---|
| 10 | 25 | 50 | 100 | 200 | |||
| Circular | 0.0 | Bootstrap | 0.0570 | 0.0480 | 0.0514 | 0.0540 | 0.0438 |
| Asymptotic | 0.1010 | 0.0645 | 0.0605 | 0.0570 | 0.0455 | ||
| Fisher’s z | 0.0279 | 0.0240 | 0.0242 | 0.0234 | 0.0193 | ||
| Stud Perm | 0.0674 | 0.0468 | 0.0488 | 0.0484 | 0.0521 | ||
| 0.3 | Bootstrap | 0.0612 | 0.0551 | 0.0511 | 0.0535 | 0.0503 | |
| Asymptotic | 0.1039 | 0.0701 | 0.0603 | 0.0552 | 0.0521 | ||
| Fisher’s z | 0.0273 | 0.0231 | 0.0233 | 0.0198 | 0.0211 | ||
| 0.6 | Bootstrap | 0.0622 | 0.0595 | 0.0581 | 0.0533 | 0.0544 | |
| Asymptotic | 0.1097 | 0.0751 | 0.0643 | 0.0568 | 0.0550 | ||
| Fisher’s z | 0.0254 | 0.0227 | 0.0243 | 0.0224 | 0.0227 | ||
* Numbers abstracted from DiCiccio and Romano (2017)
Power comparisons at α = 0.05 for bootstrap versus exact Student’s t-test for H: ρ = 0 versus H1: ρ > 0 using the sample correlation coefficient.
| Distribution | Test | ||||
|---|---|---|---|---|---|
| 10 | 25 | 50 | |||
| MVN | 0.3 | Bootstrap | 0.186 | 0.402 | 0.670 |
| t-test | 0.201 | 0.415 | 0.677 | ||
| 0.6 | Bootstrap | 0.484 | 0.917 | 0.999 | |
| t-test | 0.562 | 0.940 | 0.999 | ||
Example blood and CSF lactate levels on n = 13 female subjects.
| Blood | CSF | |
|---|---|---|
| Subject | Lactate (mM) | Lactate (mM) |
| 1 | 3.5 | 7.800 |
| 2 | 2.7 | 3.400 |
| 3 | 1.7 | 5.900 |
| 4 | 2.9 | 6.400 |
| 5 | 0.6 | 2.400 |
| 6 | 1.1 | 2.000 |
| 7 | 3.5 | 4.400 |
| 8 | 1.9 | 4.300 |
| 9 | 1.5 | 5.700 |
| 10 | 1.6 | 3.900 |
| 11 | 2.2 | 3.400 |
| 12 | 1.5 | 4.528 |
| 13 | 1.6 | 4.600 |
Fig 1Scatterplot of blood lactate levels versus CSF lactate levels.
Results of normality tests for example data.
Rejection Probabilities at α = 0.05 for bootstrap, asymptotic and Fisher’s z tests for H: ρ = ρ0 versus H1: ρ > ρ0 using the sample correlation coefficient.
| Distribution | Test | ||||||
|---|---|---|---|---|---|---|---|
| 10 | 25 | 50 | 100 | 200 | |||
| 0.0 | Bootstrap | 0.0485 | 0.0432 | 0.0450 | 0.0428 | 0.0451 | |
| Asymptotic | 0.0991 | 0.0608 | 0.0550 | 0.0467 | 0.0462 | ||
| Fisher’s z | 0.1167 | 0.1438 | 0.1657 | 0.1769 | 0.1900 | ||
| Stud Perm | 0.0444 | 0.0428 | 0.0426 | 0.0442 | 0.0391 | ||
| 0.3 | Bootstrap | 0.0533 | 0.0546 | 0.0512 | 0.0527 | 0.0527 | |
| Asymptotic | 0.1006 | 0.0638 | 0.0556 | 0.0516 | 0.0494 | ||
| Fisher’s z | 0.1036 | 0.1371 | 0.1604 | 0.1767 | 0.1847 | ||
| 0.6 | Bootstrap | 0.0576 | 0.0570 | 0.0587 | 0.0659 | 0.0570 | |
| Asymptotic | 0.1071 | 0.0621 | 0.0552 | 0.0580 | 0.0469 | ||
| Fisher’s z | 0.0991 | 0.1187 | 0.1471 | 0.1591 | 0.1619 | ||
| Multivariate | 0.0 | Bootstrap | 0.0473 | 0.0477 | 0.0470 | 0.0523 | 0.0521 |
| Asymptotic | 0.0947 | 0.0638 | 0.0545 | 0.0543 | 0.0543 | ||
| Fisher’s z | 0.0497 | 0.0466 | 0.0471 | 0.0513 | 0.0516 | ||
| Stud Perm | 0.0507 | 0.0462 | 0.0460 | 0.0456 | 0.0471 | ||
| 0.3 | Bootstrap | 0.0538 | 0.0530 | 0.0475 | 0.0440 | 0.0479 | |
| Asymptotic | 0.1084 | 0.0689 | 0.0579 | 0.0505 | 0.0510 | ||
| Fisher’s z | 0.0593 | 0.0612 | 0.0609 | 0.0636 | 0.0661 | ||
| 0.6 | Bootstrap | 0.0516 | 0.0509 | 0.0459 | 0.0407 | 0.0412 | |
| Asymptotic | 0.1069 | 0.0687 | 0.0570 | 0.0493 | 0.0489 | ||
| Fisher’s z | 0.0763 | 0.0874 | 0.0878 | 0.0981 | 0.1027 | ||
*Numbers abstracted from DiCiccio and Romano (2017)