Literature DB >> 31093948

Mass Spectrometry-Based Integration and Expansion of the Chemical Diversity Harbored Within a Marine Sponge.

Thomas P Cantrell1, Christopher J Freeman2,3, Valerie J Paul2, Vinayak Agarwal4,5, Neha Garg6,7.   

Abstract

Marine sponges and their associated symbionts produce a structurally diverse and complex set of natural products including alkaloids, terpenoids, peptides, lipids, and steroids. A single sponge with its symbionts can produce all of the above-mentioned classes of molecules and their analogs. Most approaches to evaluating sponge chemical diversity have focused on major metabolites that can be isolated and characterized; therefore, a comprehensive evaluation of intra- (within a molecular family; analogs) and inter-chemical diversity within a single sponge remains incomplete. We use a combination of metabolomics tools, including a supervised approach via manual library search and literature search, and an unsupervised approach via molecular networking and MS2LDA analysis to describe the intra and inter-chemical diversity present in Smenospongia aurea. Furthermore, we use imaging mass spectrometry to link this chemical diversity to either the sponge or the associated cyanobacteria. Using these approaches, we identify seven more molecular features that represent analogs of four previously known peptide/polyketide smenamides and assign the biosynthesis of these molecules to the symbiotic cyanobacteria by imaging mass spectrometry. We extend this analysis to a wide diversity of molecular classes including indole alkaloids and meroterpenes.

Entities:  

Keywords:  Chemical diversity; Imaging mass spectrometry; MS2LDA; Marine sponge; Molecular networking; Untargeted metabolomics

Mesh:

Substances:

Year:  2019        PMID: 31093948      PMCID: PMC6675626          DOI: 10.1007/s13361-019-02207-5

Source DB:  PubMed          Journal:  J Am Soc Mass Spectrom        ISSN: 1044-0305            Impact factor:   3.109


  9 in total

1.  Precursor-Guided Mining of Marine Sponge Metabolomes Lends Insight into Biosynthesis of Pyrrole-Imidazole Alkaloids.

Authors:  Ipsita Mohanty; Samuel G Moore; Dongqi Yi; Jason S Biggs; David A Gaul; Neha Garg; Vinayak Agarwal
Journal:  ACS Chem Biol       Date:  2020-07-29       Impact factor: 5.100

2.  Multi-Omic Profiling of Melophlus Sponges Reveals Diverse Metabolomic and Microbiome Architectures that Are Non-overlapping with Ecological Neighbors.

Authors:  Ipsita Mohanty; Sheila Podell; Jason S Biggs; Neha Garg; Eric E Allen; Vinayak Agarwal
Journal:  Mar Drugs       Date:  2020-02-19       Impact factor: 5.118

3.  An Obligate Peptidyl Brominase Underlies the Discovery of Highly Distributed Biosynthetic Gene Clusters in Marine Sponge Microbiomes.

Authors:  Nguyet A Nguyen; Zhenjian Lin; Ipsita Mohanty; Neha Garg; Eric W Schmidt; Vinayak Agarwal
Journal:  J Am Chem Soc       Date:  2021-07-02       Impact factor: 15.419

4.  Skin Microbiota Variation Among Bat Species in China and Their Potential Defense Against Pathogens.

Authors:  Zhongle Li; Aoqiang Li; Wentao Dai; Haixia Leng; Sen Liu; Longru Jin; Keping Sun; Jiang Feng
Journal:  Front Microbiol       Date:  2022-03-31       Impact factor: 5.640

Review 5.  Biomaterials and Bioactive Natural Products from Marine Invertebrates: From Basic Research to Innovative Applications.

Authors:  Giovanna Romano; Mariana Almeida; Ana Varela Coelho; Adele Cutignano; Luis G Gonçalves; Espen Hansen; Denis Khnykin; Tali Mass; Andreja Ramšak; Miguel S Rocha; Tiago H Silva; Michela Sugni; Loriano Ballarin; Anne-Marie Genevière
Journal:  Mar Drugs       Date:  2022-03-22       Impact factor: 6.085

6.  Bioprospecting the Metabolome of Plant Urtica dioica L.: A Fast Dereplication and Annotation Workflow in Plant Metabolomics.

Authors:  Keshab Bhattarai; Babita Paudel; Sujan Dahal; Parasmani Yadav; Niraj Aryal; Bikash Baral; Hari Datta Bhattarai
Journal:  Evid Based Complement Alternat Med       Date:  2022-04-21       Impact factor: 2.650

7.  The Effects of Sampling and Storage Conditions on the Metabolite Profile of the Marine Sponge Geodia barretti.

Authors:  Ida Erngren; Eva Smit; Curt Pettersson; Paco Cárdenas; Mikael Hedeland
Journal:  Front Chem       Date:  2021-05-10       Impact factor: 5.221

8.  Fast Detection of Two Smenamide Family Members Using Molecular Networking.

Authors:  Alessia Caso; Germana Esposito; Gerardo Della Sala; Joseph R Pawlik; Roberta Teta; Alfonso Mangoni; Valeria Costantino
Journal:  Mar Drugs       Date:  2019-10-30       Impact factor: 5.118

9.  Metabolomics in Functional Interrogation of Individual Holobiont Members.

Authors:  Neha Garg
Journal:  mSystems       Date:  2021-08-24       Impact factor: 6.496

  9 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.