Literature DB >> 31093480

Genetic diversity and population structure of watermelon (Citrullus sp.) genotypes.

Anamika Pandey1, Mohd Kamran Khan1, Rabia Isik2, Onder Turkmen3, Ramazan Acar4, Musa Seymen5, Erdogan E Hakki1.   

Abstract

Genetic polymorphism amid plant species is a crucial factor for plant improvement and maintaining their biodiversity. Evaluation of genetic diversity amongst plant species is significant to deal with the environmental stress conditions and their effective involvement in the breeding programs. Hence, in present study, an attempt has been made towards the genetic assessment of individual and bulked populations of 25 watermelon genotypes, belonging to Citroides (citron watermelon) and Lanatus (dessert watermelon) group from Konya, Thrace, Turkmenistan, Saudi Arabia and Turkey. The employed Random Amplified Polymorphic DNA (RAPD) and Inter-Simple Sequence Polymorphism (ISSR) marker systems provided 69.4 and 95.4% polymorphisms, respectively. Different clustering methods showed clear grouping of the genotypes based on the geographical origin and species. Citron genotypes from Turkmenistan stood apart from all the Turkish Lanatus genotypes. However, Saudi Arab Lanatus genotype grouped with native Turkish varieties indicating the genetic linkage. Among all the Turkmenistan Citron genotypes, Turkmenistan-11 was the most distinct form. Moreover, sufficient genetic variation was found between the commercial and native Lanatus genotypes of Turkey as well as Citron genotypes of Turkmenistan. Hence, it will be beneficial to include these genotypes in the future breeding programs to transfer disease-resistant alleles from Citron to Lanatus genotypes.

Entities:  

Keywords:  Genetic diversity; ISSR; Molecular breeding; Population structure; RAPD; Watermelon

Year:  2019        PMID: 31093480      PMCID: PMC6509299          DOI: 10.1007/s13205-019-1736-2

Source DB:  PubMed          Journal:  3 Biotech        ISSN: 2190-5738            Impact factor:   2.406


  24 in total

1.  Inference of population structure using multilocus genotype data.

Authors:  J K Pritchard; M Stephens; P Donnelly
Journal:  Genetics       Date:  2000-06       Impact factor: 4.562

2.  Inference of population structure using multilocus genotype data: linked loci and correlated allele frequencies.

Authors:  Daniel Falush; Matthew Stephens; Jonathan K Pritchard
Journal:  Genetics       Date:  2003-08       Impact factor: 4.562

3.  Genetic variation in five Mediterranean populations of Juniperus phoenicea as revealed by inter-simple sequence repeat (ISSR) markers.

Authors:  Marilena Meloni; Davide Perini; Rossella Filigheddu; Giorgio Binelli
Journal:  Ann Bot       Date:  2005-11-25       Impact factor: 4.357

4.  Detecting the number of clusters of individuals using the software STRUCTURE: a simulation study.

Authors:  G Evanno; S Regnaut; J Goudet
Journal:  Mol Ecol       Date:  2005-07       Impact factor: 6.185

5.  Identification of markers linked to disease-resistance genes by bulked segregant analysis: a rapid method to detect markers in specific genomic regions by using segregating populations.

Authors:  R W Michelmore; I Paran; R V Kesseli
Journal:  Proc Natl Acad Sci U S A       Date:  1991-11-01       Impact factor: 11.205

Review 6.  [Application of ISSR molecular marker in invasive plant species study].

Authors:  Fu-Rong Gui; Jian-Ying Guo; Fang-Hao Wan
Journal:  Ying Yong Sheng Tai Xue Bao       Date:  2007-04

7.  Programmed proteome response for drought avoidance/tolerance in the root of a C(3) xerophyte (wild watermelon) under water deficits.

Authors:  Kazuya Yoshimura; Akiko Masuda; Masayoshi Kuwano; Akiho Yokota; Kinya Akashi
Journal:  Plant Cell Physiol       Date:  2008-01-04       Impact factor: 4.927

8.  Evaluation of genetic diversity among different genotypes of Brassica napus using random amplified polymorphic DNA markers.

Authors:  E Fazeli; F Shahriari; H Samizadeh; A Bagheri; M Farsi
Journal:  Pak J Biol Sci       Date:  2008-12-01

9.  DNA polymorphisms amplified by arbitrary primers are useful as genetic markers.

Authors:  J G Williams; A R Kubelik; K J Livak; J A Rafalski; S V Tingey
Journal:  Nucleic Acids Res       Date:  1990-11-25       Impact factor: 16.971

10.  Inference of population structure using multilocus genotype data: dominant markers and null alleles.

Authors:  Daniel Falush; Matthew Stephens; Jonathan K Pritchard
Journal:  Mol Ecol Notes       Date:  2007-07-01
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  2 in total

1.  Study on the Role of Salicylic Acid in Watermelon-Resistant Fusarium Wilt under Different Growth Conditions.

Authors:  Feiying Zhu; Zhiwei Wang; Wenjun Su; Jianhua Tong; Yong Fang; Zhengliang Luo; Fan Yuan; Jing Xiang; Xi Chen; Ruozhong Wang
Journal:  Plants (Basel)       Date:  2022-01-22

2.  Study on the Role of Phytohormones in Resistance to Watermelon Fusarium Wilt.

Authors:  Feiying Zhu; Zhiwei Wang; Yong Fang; Jianhua Tong; Jing Xiang; Kankan Yang; Ruozhong Wang
Journal:  Plants (Basel)       Date:  2022-01-07
  2 in total

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