| Literature DB >> 31080360 |
Bin Xu1, Wei Yuan2, Li Shi3, Li Zuo3, Xing-Yu Wu3, Wei Zhang4, Qiaxian Wen1.
Abstract
BACKGROUND: Many epidemiological studies have investigated association of AXIN2 variants on overall cancer risks; however, the available results remain inconsistent.Entities:
Keywords: AXIN2; Analysis; Cancer; In silico; Polymorphism
Year: 2019 PMID: 31080360 PMCID: PMC6503355 DOI: 10.1186/s12935-019-0840-z
Source DB: PubMed Journal: Cancer Cell Int ISSN: 1475-2867 Impact factor: 5.722
Basic information for included studies of the correlation between AXIN2 148 C/T, 1365 C/T, and rs4791171 A/G variations and cancer risk
| Author/year | Origin | Ethnicity | Source | Cancer | Method | Age range | Age range | Case | Control | Case | Control | HWE | ||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 148 C/T | Case | Control | TT | TC | CC | TT | TC | CC | ||||||||
| Kanzaki 2006 [ | Japan | Asian | PB | LC | PCR–RFLP | 66.4 (mean) | NA | 160 | 109 | 8 | 71 | 81 | 15 | 52 | 42 | 0.863 |
| Kanzaki 2006 [ | Japan | Asian | PB | HNC | PCR–RFLP | 66.4 (mean) | NA | 63 | 109 | 9 | 29 | 25 | 15 | 52 | 42 | 0.863 |
| Kanzaki 2006 [ | Japan | Asian | PB | CRC | PCR–RFLP | 66.4 (mean) | NA | 113 | 109 | 15 | 44 | 54 | 15 | 52 | 42 | 0.863 |
| Gunes 2009 [ | Turkey | Caucasian | PB | LC | PCR | 59.22 ± 9.63 | 57.01 ± 7.89 | 100 | 100 | 8 | 47 | 45 | 16 | 52 | 32 | 0.501 |
| Gunes 2010 [ | Turkey | Caucasian | HB | AT | PCR | 58.66 ± 8.04 | 57.01 ± 7.89 | 100 | 100 | 16 | 45 | 39 | 16 | 52 | 32 | 0.501 |
| Pinarbasi 2011 [ | Turkey | Caucasian | HB | PC | PCR | 70.38 ± 7.78 | 68.55 ± 4.47 | 84 | 100 | 19 | 35 | 30 | 18 | 48 | 34 | 0.883 |
| Naghibal 2012 [ | Iran | Asian | HB | CRC | PCR–RFLP | NA | NA | 110 | 179 | 19 | 57 | 34 | 26 | 98 | 55 | 0.096 |
| Liu 2014 [ | China | Asian | PB | LC | RT-PCR | 57.78 ± 9.89 | 52.21 ± 10.56 | 498 | 533 | 47 | 216 | 235 | 67 | 255 | 211 | 0.457 |
| Ma 2014 [ | China | Asian | PB | PC | PCR | 71.2 (mean) | 70.4 (mean) | 103 | 100 | 11 | 31 | 61 | 9 | 52 | 39 | 0.153 |
| Mostowska 2014 [ | Poland | Caucasian | HB | OC | PCR–RFLP | 58.4 ± 9.7 | 57.4 ± 7.5 | 228 | 282 | 46 | 115 | 67 | 65 | 146 | 71 | 0.546 |
| Yadav 2016 [ | India | Asian | HB | GBC | Taqman | 52.05 ± 10.06 | 43.2 ± 11.5 | 564 | 250 | 119 | 253 | 192 | 44 | 108 | 98 | 0.138 |
| Liu 2016 [ | China | Asian | HB | PTC | MassARRAY | 45.13 ± 10.97 | 41.9 ± 10.22 | 53 | 50 | 2 | 24 | 27 | 4 | 29 | 17 | 0.084 |
| Kim 2016 [ | Korea | Asian | HB | HCC | Goldengate | 53.8 ± 10.3 | 41.1 ± 10.3 | 242 | 482 | 18 | 100 | 124 | 41 | 195 | 246 | 0.789 |
| Rosales 2016 [ | Mexico | Latin | PB | CRC | PCR–RFLP | 59.03 (mean) | 36.88 (mean) | 188 | 99 | 54 | 109 | 25 | 18 | 59 | 22 | 0.054 |
| Bahl 2017 [ | India | Asian | HB | LC | PCR–RFLP | 57.38 ± 10.74 | 53.23 ± 10.44 | 303 | 305 | 54 | 150 | 99 | 80 | 144 | 81 | 0.330 |
HB hospital-based, PB population-based, AT astrocytoma, BC breast cancer, CRC colorectal cancer, GBC gallbladder cancer, PCR–RFLP polymerase chain reaction and restrictive fragment length polymorphism, RT real time, NA not available, NOS Newcastle–Ottawa Scale, HCC hepatocellular carcinoma, HNC head and neck cancer, HWE Hardy–Weinberg equilibrium of controls, LC lung adenocarcinoma, PC prostate adenocarcinoma, PTC papillary thyroid carcinoma, OC ovarian cancer
Fig. 1Minor allele and major allele frequencies for AXIN2 148 C/T (a), 1365 C/T (b), and rs4791171 A/G (c) variants in controls stratified by ethnicity. Vertical line, allele frequency; Horizontal line, allele type
Stratified analyses of AXIN2 148 C/T, 1365 C/T, and rs4791171 A/G variants on overall cancer risk
| Variables | N | Case/control | OR (95% CI) |
|
| OR (95% CI) |
|
| OR (95% CI) |
|
| OR (95% CI) |
|
|
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| M-allele vs. W-allele | MM vs. WW | MW vs. WW | MM+MW vs. WW | |||||||||||
| 148 C/T | ||||||||||||||
| Total | 15 | 2909/2907 | 0.88 (0.77–0.99) | 0.004 | 0.041 | 0.82 (0.63–1.06) | 0.007 | 0.132 | 0.84 (0.75–0.95) | 0.112 | 0.004 | 0.82 (0.69–0.96) | 0.022 | 0.015 |
| Ethnicity | ||||||||||||||
| Asian | 10 | 2209/2226 | 0.85 (0.73–0.98) | 0.016 | 0.027 | 0.76 (0.57–1.03) | 0.040 | 0.078 | 0.84 (0.74–0.96) | 0.074 | 0.009 | 0.80 (0.66–0.96) | 0.030 | 0.020 |
| Caucasian | 4 | 512/582 | 0.85 (0.72–1.01) | 0.380 | 0.061 | 0.75 (0.53–1.07) | 0.304 | 0.108 | 0.77 (0.58–1.00) | 0.896 | 0.053 | 0.76 (0.59–0.98) | 0.701 | 0.036 |
| Latin | 1 | 188/99 | 1.48 (1.05–2.09) | – | 0.026 | 2.64 (1.21–5.78) | – | 0.015 | 1.63 (0.84–3.13) | – | 0.146 | 1.86 (0.99–3.51) | – | 0.054 |
| Cancer type | ||||||||||||||
| LC | 4 | 1061/1047 | 0.74 (0.65–0.84) | 0.602 | < 0.001 | 0.53 (0.40–0.70) | 0.360 | < 0.001 | 0.76 (0.63–0.92) | 0.865 | 0.005 | 0.70 (0.59–0.84) | 0.803 | < 0.001 |
| CRC | 3 | 411/387 | 1.10 (0.90–1.35) | 0.071 | 0.348 | 1.36 (0.87–2.11) | 0.096 | 0.178 | 0.96 (0.68–1.34) | 0.123 | 0.796 | 1.01 (0.74–1.39) | 0.060 | 0.932 |
| PC | 2 | 187/200 | 0.83 (0.62–1.12) | 0.099 | 0.223 | 1.00 (0.54–1.87) | 0.509 | 0.987 | 0.54 (0.35–0.84) | 0.088 | 0.006 | 0.62 (0.41–0.93) | 0.078 | 0.022 |
| Others | 7 | 1250/1273 | 0.98 (0.87–1.11) | 0.217 | 0.751 | 0.98 (0.76–1.26) | 0.363 | 0.862 | 0.96 (0.80–1.15) | 0.375 | 0.640 | 0.96 (0.81–1.14) | 0.218 | 0.664 |
| Source | ||||||||||||||
| HB | 8 | 1684/1748 | 0.94 (0.85–1.04) | 0.093 | 0.219 | 0.89 (0.72–1.09) | 0.128 | 0.267 | 0.93 (0.80–1.09) | 0.564 | 0.364 | 0.92 (0.80–1.07) | 0.268 | 0.272 |
| PB | 7 | 1225/1159 | 0.82 (0.65–1.02) | 0.009 | 0.074 | 0.73 (0.44–1.22) | 0.007 | 0.235 | 0.74 (0.62–0.88) | 0.083 | 0.001 | 0.74 (0.56–0.97) | 0.037 | 0.032 |
| 1365 C/T | ||||||||||||||
| Total | 4 | 587/605 | 0.71 (0.61–0.98) | 0.873 | 0.038 | 1.11 (0.34–3.70) | – | 0.859 | 0.63 (0.44–0.91) | 0.668 | 0.014 | 0.66 (0.47–0.94) | 0.775 | 0.021 |
| Ethnicity | ||||||||||||||
| Asian | 1 | 303/305 | 0.66 (0.43–0.99) | – | 0.043 | 1.11 (0.34–3.70) | – | 0.859 | 0.53 (0.32–0.86) | – | 0.010 | 0.58 (0.37–0.92) | – | 0.020 |
| Caucasian | 3 | 284/300 | 0.81 (0.47–1.38) | 0.855 | 0.440 | NA | 0.80 (0.46–1.39) | 0.846 | 0.428 | 0.80 (0.46–1.39) | 0.846 | 0.428 | ||
| Cancer type | ||||||||||||||
| LC | 2 | 403/405 | 0.67 (0.46–0.97) | 0.806 | 0.034 | 1.11 (0.34–3.70) | – | 0.859 | 0.57 (0.37–0.87) | 0.548 | 0.009 | 0.61 (0.41–0.91) | 0.669 | 0.016 |
| PC | 1 | 84/100 | 1.04 (0.37–2.94) | – | 0.936 | NA | 1.05 (0.36–3.01) | – | 0.934 | 1.05 (0.36–3.01) | – | 0.934 | ||
| AT | 1 | 100/100 | 0.74 (0.30–1.79) | – | 0.503 | NA | 0.73 (0.29–1.81) | – | 0.490 | 0.73 (0.29–1.81) | – | 0.490 | ||
| rs4791171 A/G | ||||||||||||||
| Total | 3 | 785/443 | 0.99 (0.85–1.17) | 0.786 | 0.864 | 0.94 (0.66–1.33) | 0.873 | 0.728 | 0.86 (0.62–1.17) | 0.522 | 0.322 | 0.89 (0.66–1.19) | 0.575 | 0.429 |
| Ethnicity | ||||||||||||||
| Asian | 1 | 564/250 | 1.00 (0.80–1.24) | – | 0.997 | 0.93 (0.69–1.48) | – | 0.773 | 0.84 (0.63–1.31) | – | 0.434 | 0.88 (0.68–1.34) | – | 0.556 |
| Arabian | 2 | 221/193 | 0.96 (0.73–1.27) | 0.511 | 0.778 | 0.96 (0.66–1.62) | 0.603 | 0.843 | 0.87 (0.56–1.36) | 0.257 | 0.538 | 0.89 (0.69–1.36) | 0.294 | 0.596 |
| Cancer type | ||||||||||||||
| BC | 1 | 99/83 | 0.87 (0.57–1.31) | – | 0.497 | 0.80 (0.35–1.84) | – | 0.599 | 0.65 (0.33–1.28) | – | 0.209 | 0.69 (0.36–1.31) | – | 0.255 |
| GBC | 1 | 564/250 | 1.00 (0.80–1.24) | – | 0.997 | 0.93 (0.59–1.48) | – | 0.773 | 0.84 (0.53–1.31) | – | 0.434 | 0.88 (0.58–1.34) | – | 0.556 |
| CRC | 1 | 122/110 | 1.04 (0.72–1.51) | – | 0.822 | 1.07 (0.53–2.17) | – | 0.854 | 1.09 (0.60–1.96) | – | 0.778 | 1.08 (0.63–1.87) | – | 0.777 |
AT astrocytoma, BC breast cancer, CRC colorectal cancer, HB hospital-based, PB population-based, NA not available, LC lung adenocarcinoma, PC prostate adenocarcinoma, GBC gallbladder cancer
aP value of Q-test for heterogeneity test (Pheter)
Fig. 2Forest plot of cancer susceptibility correlated with AXIN2 148 C/T variant (heterozygote comparison of TC vs. CC, fixed-effects) in the stratified analyses by ethnicity
Fig. 3Forest plot of TC versus CC genetic model of AXIN2 148 C/T polymorphism in the stratified analyses by cancer type (fixed-effects)
Fig. 4In silico analysis of AXIN2 expressions in lung adenocarcinoma (a) and prostate adenocarcinoma (b)
Fig. 5Association of AXIN2 expression and the overall survival (OS) time among lung adenocarcinoma participants. Expression of AXIN2 was decreased in lung adenocarcinoma tissue (a). However, no vital influence of overall survival time was indicated between high and low AXIN2 expression groups (b, P > 0.05)
Fig. 6Begg’s funnel plot of publication bias for AXIN2 148 C/T (a), 1365 C/T (b), and rs4791171 A/G (c) under dominant model
Fig. 7Sensitivity analyses about AXIN2 148 C/T, 1365 C/T, and rs4791171 A/G variants and cancer risk (Dominant genetic model of MM + MW vs. WW). Leave-one-out sensitivity analyses were carried out to assess the stability of the overall results. No single study can substantially change the overall OR for AXIN2 148 C/T (a), 1365 C/T (b), and rs4791171 A/G (c) polymorphisms
Fig. 8AXIN2 correlations crosstalk with other genes determined by String server (Homo sapiens). 20 related genes could participate in the gene–gene interaction