Literature DB >> 31073562

Innovative omics-based approaches for prioritisation and targeted isolation of natural products - new strategies for drug discovery.

Jean-Luc Wolfender1, Marc Litaudon, David Touboul, Emerson Ferreira Queiroz.   

Abstract

Covering: 2013 to 2019 The exploration of the chemical diversity of extracts from various biological sources has led to major drug discoveries. Over the past two decades, despite the introduction of advanced methodologies for natural product (NP) research (e.g., dereplication and high content screening), successful accounts of the validation of NPs as lead therapeutic candidates have been limited. In this context, one of the main challenges faced is related to working with crude natural extracts because of their complex composition and the inadequacies of classical bioguided isolation studies given the pace of high-throughput screening campaigns. In line with the development of metabolomics, genomics and chemometrics, significant advances in metabolite profiling have been achieved and have generated high-quality massive genome and metabolome data on natural extracts. The unambiguous identification of each individual NP in an extract using generic methods remains challenging. However, the establishment of structural links among NPs via molecular network analysis and the determination of common features of extract composition have provided invaluable information to the scientific community. In this context, new multi-informational-based profiling approaches integrating taxonomic and/or bioactivity data can hold promise for the discovery and development of new bioactive compounds and return NPs back to an exciting era of development. In this article, we examine recent studies that have the potential to improve the efficiency of NP prioritisation and to accelerate the targeted isolation of key NPs. Perspectives on the field's evolution are discussed.

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Year:  2019        PMID: 31073562     DOI: 10.1039/c9np00004f

Source DB:  PubMed          Journal:  Nat Prod Rep        ISSN: 0265-0568            Impact factor:   13.423


  33 in total

1.  Identification and dereplication of endophytic Colletotrichum strains by MALDI TOF mass spectrometry and molecular networking.

Authors:  Morgane Barthélemy; Vincent Guérineau; Grégory Genta-Jouve; Mélanie Roy; Jérôme Chave; Régis Guillot; Léonie Pellissier; Jean-Luc Wolfender; Didier Stien; Véronique Eparvier; David Touboul
Journal:  Sci Rep       Date:  2020-11-13       Impact factor: 4.379

2.  Identification of chemotypes in bitter melon by metabolomics: a plant with potential benefit for management of diabetes in traditional Chinese medicine.

Authors:  Shuaizhen Zhou; Pierre-Marie Allard; Christian Wolfrum; Changqiang Ke; Chunping Tang; Yang Ye; Jean-Luc Wolfender
Journal:  Metabolomics       Date:  2019-07-18       Impact factor: 4.290

3.  Experimental and Theoretical Insights on Chemopreventive Effect of the Liposomal Thymoquinone Against Benzo[a]pyrene-Induced Lung Cancer in Swiss Albino Mice.

Authors:  Arif Khan; Mohammed A Alsahli; Mohammad A Aljasir; Hamzah Maswadeh; Mugahid A Mobark; Faizul Azam; Khaled S Allemailem; Faris Alrumaihi; Fahad A Alhumaydhi; Ahmad A Almatroudi; Naif AlSuhaymi; Masood A Khan
Journal:  J Inflamm Res       Date:  2022-04-08

4.  Rapid Screening of Polyol Polyketides from Marine Dinoflagellates.

Authors:  Adrián Morales-Amador; María L Souto; Christian Hertweck; José J Fernández; María García-Altares
Journal:  Anal Chem       Date:  2022-10-03       Impact factor: 8.008

Review 5.  Updated Trends on the Biodiscovery of New Marine Natural Products from Invertebrates.

Authors:  Ricardo Calado; Renato Mamede; Sónia Cruz; Miguel C Leal
Journal:  Mar Drugs       Date:  2022-06-09       Impact factor: 6.085

Review 6.  Ethnobotany and the Role of Plant Natural Products in Antibiotic Drug Discovery.

Authors:  Gina Porras; François Chassagne; James T Lyles; Lewis Marquez; Micah Dettweiler; Akram M Salam; Tharanga Samarakoon; Sarah Shabih; Darya Raschid Farrokhi; Cassandra L Quave
Journal:  Chem Rev       Date:  2020-11-09       Impact factor: 60.622

7.  Development of an NMR-Based Platform for the Direct Structural Annotation of Complex Natural Products Mixtures.

Authors:  Joseph M Egan; Jeffrey A van Santen; Dennis Y Liu; Roger G Linington
Journal:  J Nat Prod       Date:  2021-03-22       Impact factor: 4.050

8.  1H NMR-MS-based heterocovariance as a drug discovery tool for fishing bioactive compounds out of a complex mixture of structural analogues.

Authors:  Ulrike Grienke; Paul A Foster; Julia Zwirchmayr; Ammar Tahir; Judith M Rollinger; Emmanuel Mikros
Journal:  Sci Rep       Date:  2019-07-31       Impact factor: 4.379

9.  The Natural Products Atlas: An Open Access Knowledge Base for Microbial Natural Products Discovery.

Authors:  Jeffrey A van Santen; Grégoire Jacob; Amrit Leen Singh; Victor Aniebok; Marcy J Balunas; Derek Bunsko; Fausto Carnevale Neto; Laia Castaño-Espriu; Chen Chang; Trevor N Clark; Jessica L Cleary Little; David A Delgadillo; Pieter C Dorrestein; Katherine R Duncan; Joseph M Egan; Melissa M Galey; F P Jake Haeckl; Alex Hua; Alison H Hughes; Dasha Iskakova; Aswad Khadilkar; Jung-Ho Lee; Sanghoon Lee; Nicole LeGrow; Dennis Y Liu; Jocelyn M Macho; Catherine S McCaughey; Marnix H Medema; Ram P Neupane; Timothy J O'Donnell; Jasmine S Paula; Laura M Sanchez; Anam F Shaikh; Sylvia Soldatou; Barbara R Terlouw; Tuan Anh Tran; Mercia Valentine; Justin J J van der Hooft; Duy A Vo; Mingxun Wang; Darryl Wilson; Katherine E Zink; Roger G Linington
Journal:  ACS Cent Sci       Date:  2019-11-14       Impact factor: 14.553

10.  Untargeted metabolomics approach to discriminate mistletoe commercial products.

Authors:  Cécile Vanhaverbeke; David Touboul; Nicolas Elie; Martine Prévost; Cécile Meunier; Sylvie Michelland; Valérie Cunin; Ling Ma; David Vermijlen; Cédric Delporte; Stéphanie Pochet; Audrey Le Gouellec; Michel Sève; Pierre Van Antwerpen; Florence Souard
Journal:  Sci Rep       Date:  2021-07-09       Impact factor: 4.379

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