Literature DB >> 31073263

INFERENCE FOR LOW-DIMENSIONAL COVARIATES IN A HIGH-DIMENSIONAL ACCELERATED FAILURE TIME MODEL.

Hao Chai1, Qingzhao Zhang2, Jian Huang3, Shuangge Ma1,2.   

Abstract

Data with high-dimensional covariates are now commonly encountered. Compared to other types of responses, research on high-dimensional data with censored survival responses is still relatively limited, and most of the existing studies have been focused on estimation and variable selection. In this study, we consider data with a censored survival response, a set of low-dimensional covariates of main interest, and a set of high-dimensional covariates that may also affect survival. The accelerated failure time model is adopted to describe survival. The goal is to conduct inference for the effects of low-dimensional covariates, while properly accounting for the high-dimensional covariates. A penalization-based procedure is developed, and its validity is established under mild and widely adopted conditions. Simulation suggests satisfactory performance of the proposed procedure, and the analysis of two cancer genetic datasets demonstrates its practical applicability.

Entities:  

Keywords:  AFT model; censored survival data; high-dimensional inference

Year:  2019        PMID: 31073263      PMCID: PMC6502249          DOI: 10.5705/ss.202016.0449

Source DB:  PubMed          Journal:  Stat Sin        ISSN: 1017-0405            Impact factor:   1.261


  6 in total

1.  Regularized estimation in the accelerated failure time model with high-dimensional covariates.

Authors:  Jian Huang; Shuangge Ma; Huiliang Xie
Journal:  Biometrics       Date:  2006-09       Impact factor: 2.571

2.  Rank-based estimation in the {ell}1-regularized partly linear model for censored outcomes with application to integrated analyses of clinical predictors and gene expression data.

Authors:  Brent A Johnson
Journal:  Biostatistics       Date:  2009-06-24       Impact factor: 5.899

3.  VARIABLE SELECTION IN PARTLY LINEAR REGRESSION MODEL WITH DIVERGING DIMENSIONS FOR RIGHT CENSORED DATA.

Authors:  Shuangge Ma; Pang Du
Journal:  Stat Sin       Date:  2012-07-01       Impact factor: 1.261

4.  Variable selection in the accelerated failure time model via the bridge method.

Authors:  Jian Huang; Shuangge Ma
Journal:  Lifetime Data Anal       Date:  2009-12-16       Impact factor: 1.588

5.  Regularized estimation for the accelerated failure time model.

Authors:  T Cai; J Huang; L Tian
Journal:  Biometrics       Date:  2009-06       Impact factor: 2.571

6.  Clinicopathologic characteristics and gene expression analyses of non-KRAS 12/13, RAS-mutated metastatic colorectal cancer.

Authors:  V K Morris; F A San Lucas; M J Overman; C Eng; M P Morelli; Z-Q Jiang; R Luthra; F Meric-Bernstam; D Maru; P Scheet; S Kopetz; E Vilar
Journal:  Ann Oncol       Date:  2014-07-09       Impact factor: 32.976

  6 in total
  1 in total

1.  Marginal false discovery rate for a penalized transformation survival model.

Authors:  Weijuan Liang; Shuangge Ma; Cunjie Lin
Journal:  Comput Stat Data Anal       Date:  2021-04-02       Impact factor: 2.035

  1 in total

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