Literature DB >> 31072488

Measuring electronic structure properties of flavins and flavoproteins by electronic Stark spectroscopy.

Robert J Stanley1, Cornelius J van Galen2.   

Abstract

The optical spectrum of a flavoprotein is one of its signature properties. No two flavoprotein absorption spectra are exactly alike as each encodes the details of the interaction of the flavin cofactor electronic structure with the specific protein binding pocket. Electronic Stark spectroscopy has the potential to elucidate these interactions with high sensitivity, at low cost, and requiring minimal technical sophistication. In this chapter we will outline the theoretical basis for Stark spectroscopy and describe the construction of the Stark spectrometer. Step-by-step instructions are given for acquiring and interpreting Stark spectra to retrieve difference moments of the flavin ground versus excited state charge distributions.
© 2019 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Dipole moments; Electroabsorption spectroscopy; Electrochromism; Flavins; Flavoproteins; Stark spectroscopy

Mesh:

Substances:

Year:  2019        PMID: 31072488      PMCID: PMC7301760          DOI: 10.1016/bs.mie.2019.03.012

Source DB:  PubMed          Journal:  Methods Enzymol        ISSN: 0076-6879            Impact factor:   1.600


  26 in total

1.  Ultrafast transient mid IR to visible spectroscopy of fully reduced flavins.

Authors:  Rui-Kun Zhao; Andras Lukacs; Allison Haigney; Richard Brust; Gregory M Greetham; Michael Towrie; Peter J Tonge; Stephen R Meech
Journal:  Phys Chem Chem Phys       Date:  2011-09-01       Impact factor: 3.676

Review 2.  Electron transfer mechanisms of DNA repair by photolyase.

Authors:  Dongping Zhong
Journal:  Annu Rev Phys Chem       Date:  2015-04       Impact factor: 12.703

3.  The Missing Electrostatic Interactions Between DNA Substrate and Sulfolobus solfataricus DNA Photolyase: What is the Role of Charged Amino Acids in Thermophilic DNA Binding Proteins?

Authors:  Yvonne M Gindt; Ban H Edani; Antonia Olejnikova; Ariana N Roberts; Sudipto Munshi; Robert J Stanley
Journal:  J Phys Chem B       Date:  2016-09-26       Impact factor: 2.991

4.  Flavin as a photo-active acceptor for efficient energy and charge transfer in a model donor-acceptor system.

Authors:  Xi Yu; Serkan Eymur; Vijay Singh; Boqian Yang; Murat Tonga; Amarnath Bheemaraju; Graeme Cooke; Chandramouleeswaran Subramani; Dhandapani Venkataraman; Robert J Stanley; Vincent M Rotello
Journal:  Phys Chem Chem Phys       Date:  2012-04-16       Impact factor: 3.676

5.  An Ethenoadenine FAD Analog Accelerates UV Dimer Repair by DNA Photolyase.

Authors:  Madhavan Narayanan; Vijay R Singh; Goutham Kodali; Katarina Moravcevic; Kimberly Jacoby Morris; Robert J Stanley
Journal:  Photochem Photobiol       Date:  2017-01       Impact factor: 3.421

6.  Excited state electronic structures of 5,10-methenyltetrahydrofolate and 5,10-methylenetetrahydrofolate determined by Stark spectroscopy.

Authors:  Raymond F Pauszek; Goutham Kodali; Robert J Stanley
Journal:  J Phys Chem A       Date:  2014-05-21       Impact factor: 2.781

7.  Charge redistribution in oxidized and semiquinone E. coli DNA photolyase upon photoexcitation: stark spectroscopy reveals a rationale for the position of Trp382.

Authors:  Goutham Kodali; Salim U Siddiqui; Robert J Stanley
Journal:  J Am Chem Soc       Date:  2009-04-08       Impact factor: 15.419

8.  2-Aminopurine excited state electronic structure measured by stark spectroscopy.

Authors:  Goutham Kodali; Kurt A Kistler; Spiridoula Matsika; Robert J Stanley
Journal:  J Phys Chem B       Date:  2008-01-23       Impact factor: 2.991

9.  Measurement of the electronic properties of the flavoprotein old yellow enzyme (OYE) and the OYE:p-Cl phenol charge-transfer complex using Stark spectroscopy.

Authors:  Nancy Hopkins; Robert J Stanley
Journal:  Biochemistry       Date:  2003-02-04       Impact factor: 3.162

Review 10.  The human flavoproteome.

Authors:  Wolf-Dieter Lienhart; Venugopal Gudipati; Peter Macheroux
Journal:  Arch Biochem Biophys       Date:  2013-03-15       Impact factor: 4.013

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  1 in total

1.  Stark Spectroscopy of Lumichrome: A Possible Candidate for Stand-Off Detection of Bacterial Quorum Sensing.

Authors:  Cornelius van Galen; David T Barnard; Robert J Stanley
Journal:  J Phys Chem B       Date:  2020-12-16       Impact factor: 2.991

  1 in total

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