Literature DB >> 31069834

Exploring self-organization of molecular tether molecules on a gold surface by global structure optimization.

Antonia Freibert1,2, Johannnes M Dieterich1, Bernd Hartke1.   

Abstract

We employ nondeterministic global cluster structure optimization, based on the evolutionary algorithms paradigm, to model the self-assembly of complex molecules on a surface. As a real-life application example directly related to many recent experiments, we use this approach for the assembly of triazatriangulene "platform" molecules on the Au(111) surface. Without additional restrictions like spatial discretizations, coarse-graining or precalculated adsorption poses, and despite the proof-of-principle character of this study, we achieve satisfactory qualitative agreement with several experimental observations and can provide answers to questions that experiments on these species had left open so far.
© 2019 Wiley Periodicals, Inc. © 2019 Wiley Periodicals, Inc.

Entities:  

Keywords:  evolutionary algorithms; genetic algorithms; nondeterministic global optimization; surface monolayers

Year:  2019        PMID: 31069834     DOI: 10.1002/jcc.25853

Source DB:  PubMed          Journal:  J Comput Chem        ISSN: 0192-8651            Impact factor:   3.376


  2 in total

1.  Interfacial Charge Transfer Influences Thin-Film Polymorphism.

Authors:  Fabio Calcinelli; Andreas Jeindl; Lukas Hörmann; Simiam Ghan; Harald Oberhofer; Oliver T Hofmann
Journal:  J Phys Chem C Nanomater Interfaces       Date:  2022-02-01       Impact factor: 4.126

2.  Systematic Comparison of Genetic Algorithm and Basin Hopping Approaches to the Global Optimization of Si(111) Surface Reconstructions.

Authors:  Maximilian N Bauer; Matt I J Probert; Chiara Panosetti
Journal:  J Phys Chem A       Date:  2022-05-06       Impact factor: 2.944

  2 in total

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