Literature DB >> 3106318

Phylogenetic analysis of the coryneform bacteria by 5S rRNA sequences.

Y H Park, H Hori, K Suzuki, S Osawa, K Komagata.   

Abstract

Nucleotide sequences of 5S rRNAs from 11 coryneform bacteria were determined. These were the type strains of Corynebacterium glutamicum, Corynebacterium xerosis, Brevibacterium linens, Arthrobacter globiformis, Cellulomonas biazotea, Aureobacterium testaceum, Curtobacterium citreum, Pimelobacter simplex, and Caseobacter polymorphus and representative strains of "Corynebacterium aquaticum" and Corynebacterium xerosis. A phylogenetic tree constructed from the sequences of these bacteria and published sequences indicated that the coryneform bacteria consist of a distinct eubacterial branch together with Streptomyces and Micrococcus spp. These bacteria could be further divided into four subgroups.

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Year:  1987        PMID： 3106318      PMCID： PMC212027          DOI： 10.1128/jb.169.5.1801-1806.1987

Source DB:  PubMed          Journal:  J Bacteriol        ISSN： 0021-9193            Impact factor:   3.490


  12 in total

1.  Nucleotide sequence of Clostridium pasteurianum 5S rRNA.

Authors:  C D Pribula; G E Fox; C R Woese
Journal:  FEBS Lett       Date:  1976-05-01       Impact factor: 4.124

2.  Construction of the mycoplasma evolutionary tree from 5S rRNA sequence data.

Authors:  M J Rogers; J Simmons; R T Walker; W G Weisburg; C R Woese; R S Tanner; I M Robinson; D A Stahl; G Olsen; R H Leach
Journal:  Proc Natl Acad Sci U S A       Date:  1985-02       Impact factor: 11.205

3.  Evolutionary change in 5S rRNA secondary structure and a phylogenic tree of 352 5S rRNA species.

Authors:  H Hori; S Osawa
Journal:  Biosystems       Date:  1986       Impact factor: 1.973

4.  Direct chemical method for sequencing RNA.

Authors:  D A Peattie
Journal:  Proc Natl Acad Sci U S A       Date:  1979-04       Impact factor: 11.205

Review 5.  Peptidoglycan types of bacterial cell walls and their taxonomic implications.

Authors:  K H Schleifer; O Kandler
Journal:  Bacteriol Rev       Date:  1972-12

6.  Estimation of secondary structure in ribonucleic acids.

Authors:  I Tinoco; O C Uhlenbeck; M D Levine
Journal:  Nature       Date:  1971-04-09       Impact factor: 49.962

7.  A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences.

Authors:  M Kimura
Journal:  J Mol Evol       Date:  1980-12       Impact factor: 2.395

8.  Secondary structure and phylogeny of Staphylococcus and Micrococcus 5S rRNAs.

Authors:  S Dekio; R Yamasaki; J Jidoi; H Hori; S Osawa
Journal:  J Bacteriol       Date:  1984-07       Impact factor: 3.490

9.  3' Terminal labelling of RNA of RNA with beta-32P-pyrophosphate group and its application to the sequence analysis of 5S RNA from Streptomyces griseus.

Authors:  A Simoncsits
Journal:  Nucleic Acids Res       Date:  1980-09-25       Impact factor: 16.971

10.  Phylogenetic analysis of the genera Thiobacillus and Thiomicrospira by 5S rRNA sequences.

Authors:  D J Lane; D A Stahl; G J Olsen; D J Heller; N R Pace
Journal:  J Bacteriol       Date:  1985-07       Impact factor: 3.490
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  7 in total

1.  Sequence, proposed secondary structure, and phylogenetic analysis of the chloroplast 5S rRNA gene of the brown alga Pylaiella littoralis (L.) Kjellm.

Authors:  C C Somerville; S Jouannic; S Loiseaux-de Goër
Journal:  J Mol Evol       Date:  1992-03       Impact factor: 2.395

2.  A physical and genetic map of the Corynebacterium glutamicum ATCC 13032 chromosome.

Authors:  B Bathe; J Kalinowski; A Pühler
Journal:  Mol Gen Genet       Date:  1996-09-13

3.  5S ribosomal RNA sequences of Vibrio adaptatus, V. cyclosites, V. hollisae and V. neocistes; three of these eubacteria may not be true members of the Vibrionaceae.

Authors:  D G Muir; H Hori; B A Ortiz-Conde; M S Anikis; R R Colwell
Journal:  Nucleic Acids Res       Date:  1990-03-25       Impact factor: 16.971

4.  Nucleotide sequences of 5S ribosomal RNAs of Arthrobacter oxydans, Arthrobacter polychromogenes, Arthrobacter globiformis and 'Brevibacterium helvolum'.

Authors:  Y Saitoh-Kodama; N Amano; T Amachi
Journal:  Nucleic Acids Res       Date:  1988-08-11       Impact factor: 16.971

5.  Duplication of the tuf gene: a new insight into the phylogeny of eubacteria.

Authors:  S Sela; D Yogev; S Razin; H Bercovier
Journal:  J Bacteriol       Date:  1989-01       Impact factor: 3.490

6.  Nucleotide sequences of 5S ribosomal RNAs from three marine eubacteria: Shewanella hanedai, Alteromonas colwelliana and Vibrio mediterranei.

Authors:  B A Ortiz-Conde; D G Muir; C J Pillidge; K S Gobius; M S Anikis; D M Powell; H Hori; R R Colwell
Journal:  Nucleic Acids Res       Date:  1989-06-26       Impact factor: 16.971

7.  Specificity of an extracellular proteinase from Brevibacterium linens ATCC 9174 on bovine alpha s1-casein.

Authors:  F P Rattray; P F Fox; A Healy
Journal:  Appl Environ Microbiol       Date:  1996-02       Impact factor: 4.792
  7 in total

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