Literature DB >> 31061170

Posttranscriptional regulation of colonic epithelial repair by RNA binding protein IMP1/IGF2BP1.

Priya Chatterji1, Patrick A Williams2, Kelly A Whelan3,4, Fernando C Samper5,6, Sarah F Andres1, Lauren A Simon2, Louis R Parham2, Rei Mizuno1, Emma T Lundsmith7, David Sm Lee8, Shun Liang9, Hr Sagara Wijeratne9, Stefanie Marti4,5, Lillian Chau1, Veronique Giroux10, Benjamin J Wilkins11, Gary D Wu1, Premal Shah9,12, Gian G Tartaglia5,6,13, Kathryn E Hamilton14.   

Abstract

RNA binding proteins, including IMP1/IGF2BP1, are essential regulators of intestinal development and cancer. Imp1 hypomorphic mice exhibit gastrointestinal growth defects, yet the specific role for IMP1 in colon epithelial repair is unclear. Our prior work revealed that intestinal epithelial cell-specific Imp1 deletion (Imp1 Δ IEC ) was associated with better regeneration in mice after irradiation. Here, we report increased IMP1 expression in patients with Crohn's disease and ulcerative colitis. We demonstrate that Imp1 Δ IEC mice exhibit enhanced recovery following dextran sodium sulfate (DSS)-mediated colonic injury. Imp1 Δ IEC mice exhibit Paneth cell granule changes, increased autophagy flux, and upregulation of Atg5. In silico and biochemical analyses revealed direct binding of IMP1 to MAP1LC3B, ATG3, and ATG5 transcripts. Genetic deletion of essential autophagy gene Atg7 in Imp1 Δ IEC mice revealed increased sensitivity of double-mutant mice to colonic injury compared to control or Atg7 single mutant mice, suggesting a compensatory relationship between Imp1 and the autophagy pathway. The present study defines a novel interplay between IMP1 and autophagy, where IMP1 may be transiently induced during damage to modulate colonic epithelial cell responses to damage.
© 2019 The Authors.

Entities:  

Keywords:  IGF2BP1; IMP1; RNA binding protein; colonic repair; inflammatory bowel disease

Mesh:

Substances:

Year:  2019        PMID: 31061170      PMCID: PMC6549032          DOI: 10.15252/embr.201847074

Source DB:  PubMed          Journal:  EMBO Rep        ISSN: 1469-221X            Impact factor:   8.807


  71 in total

1.  RNA-binding IMPs promote cell adhesion and invadopodia formation.

Authors:  Jonas Vikesaa; Thomas V O Hansen; Lars Jønson; Rehannah Borup; Ulla M Wewer; Jan Christiansen; Finn C Nielsen
Journal:  EMBO J       Date:  2006-03-16       Impact factor: 11.598

2.  Single Lgr5 stem cells build crypt-villus structures in vitro without a mesenchymal niche.

Authors:  Toshiro Sato; Robert G Vries; Hugo J Snippert; Marc van de Wetering; Nick Barker; Daniel E Stange; Johan H van Es; Arie Abo; Pekka Kujala; Peter J Peters; Hans Clevers
Journal:  Nature       Date:  2009-03-29       Impact factor: 49.962

3.  m6A RNA modification controls autophagy through upregulating ULK1 protein abundance.

Authors:  Shouheng Jin; Xiya Zhang; Yanyan Miao; Puping Liang; Kaiyu Zhu; Yuanchu She; Yaoxing Wu; Di-Ao Liu; Junjiu Huang; Jian Ren; Jun Cui
Journal:  Cell Res       Date:  2018-07-25       Impact factor: 25.617

4.  ATG7 Gene Expression as a Novel Tissue Biomarker in Eosinophilic Esophagitis.

Authors:  Jamie F Merves; Kelly A Whelan; Alain J Benitez; Amanda B Muir; Glenn T Furuta; Mei-Lun Wang; Gary W Falk; Jonathan M Spergel; Hiroshi Nakagawa
Journal:  Am J Gastroenterol       Date:  2016-01       Impact factor: 10.864

5.  Loss of Paneth Cell Autophagy Causes Acute Susceptibility to Toxoplasma gondii-Mediated Inflammation.

Authors:  Elise Burger; Alessandra Araujo; Américo López-Yglesias; Michael W Rajala; Linda Geng; Beth Levine; Lora V Hooper; Ezra Burstein; Felix Yarovinsky
Journal:  Cell Host Microbe       Date:  2018-01-18       Impact factor: 21.023

6.  Igf2bp1 is required for full induction of Ptgs2 mRNA in colonic mesenchymal stem cells in mice.

Authors:  Nicholas A Manieri; Monica R Drylewicz; Hiroyuki Miyoshi; Thaddeus S Stappenbeck
Journal:  Gastroenterology       Date:  2012-03-27       Impact factor: 22.682

7.  Loss of the autophagy protein Atg16L1 enhances endotoxin-induced IL-1beta production.

Authors:  Tatsuya Saitoh; Naonobu Fujita; Myoung Ho Jang; Satoshi Uematsu; Bo-Gie Yang; Takashi Satoh; Hiroko Omori; Takeshi Noda; Naoki Yamamoto; Masaaki Komatsu; Keiji Tanaka; Taro Kawai; Tohru Tsujimura; Osamu Takeuchi; Tamotsu Yoshimori; Shizuo Akira
Journal:  Nature       Date:  2008-10-05       Impact factor: 49.962

8.  Transcriptome-wide identification of RNA-binding protein and microRNA target sites by PAR-CLIP.

Authors:  Markus Hafner; Markus Landthaler; Lukas Burger; Mohsen Khorshid; Jean Hausser; Philipp Berninger; Andrea Rothballer; Manuel Ascano; Anna-Carina Jungkamp; Mathias Munschauer; Alexander Ulrich; Greg S Wardle; Scott Dewell; Mihaela Zavolan; Thomas Tuschl
Journal:  Cell       Date:  2010-04-02       Impact factor: 41.582

9.  Impairment of starvation-induced and constitutive autophagy in Atg7-deficient mice.

Authors:  Masaaki Komatsu; Satoshi Waguri; Takashi Ueno; Junichi Iwata; Shigeo Murata; Isei Tanida; Junji Ezaki; Noboru Mizushima; Yoshinori Ohsumi; Yasuo Uchiyama; Eiki Kominami; Keiji Tanaka; Tomoki Chiba
Journal:  J Cell Biol       Date:  2005-05-02       Impact factor: 10.539

10.  RiboDiff: detecting changes of mRNA translation efficiency from ribosome footprints.

Authors:  Yi Zhong; Theofanis Karaletsos; Philipp Drewe; Vipin T Sreedharan; David Kuo; Kamini Singh; Hans-Guido Wendel; Gunnar Rätsch
Journal:  Bioinformatics       Date:  2016-09-14       Impact factor: 6.937

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  3 in total

1.  The mRNA-binding protein IGF2BP1 maintains intestinal barrier function by up-regulating occludin expression.

Authors:  Vikash Singh; Chethana P Gowda; Vishal Singh; Ashwinkumar S Ganapathy; Dipti M Karamchandani; Melanie A Eshelman; Gregory S Yochum; Prashant Nighot; Vladimir S Spiegelman
Journal:  J Biol Chem       Date:  2020-05-08       Impact factor: 5.157

Review 2.  Roles for Autophagy in Esophageal Carcinogenesis: Implications for Improving Patient Outcomes.

Authors:  Reshu Saxena; Alena Klochkova; Mary Grace Murray; Mohammad Faujul Kabir; Safiyah Samad; Tyler Beccari; Julie Gang; Kishan Patel; Kathryn E Hamilton; Kelly A Whelan
Journal:  Cancers (Basel)       Date:  2019-10-31       Impact factor: 6.639

3.  mTOR-autophagy promotes pulmonary senescence through IMP1 in chronic toxicity of methamphetamine.

Authors:  Mei-Jia Zhu; Bing-Yang Liu; Lin Shi; Xin Wang; Yun Wang
Journal:  J Cell Mol Med       Date:  2020-09-11       Impact factor: 5.310

  3 in total

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