Literature DB >> 31059426

Matched Filters for Noisy Induced Subgraph Detection.

Daniel L Sussman, Youngser Park, Carey E Priebe, Vince Lyzinski.   

Abstract

The problem of finding the vertex correspondence between two noisy graphs with different number of vertices where the smaller graph is still large has many applications in social networks, neuroscience, and computer vision. We propose a solution to this problem via a graph matching matched filter: centering and padding the smaller adjacency matrix and applying graph matching methods to align it to the larger network. The centering and padding schemes can be incorporated into any algorithm that matches using adjacency matrices. Under a statistical model for correlated pairs of graphs, which yields a noisy copy of the small graph within the larger graph, the resulting optimization problem can be guaranteed to recover the true vertex correspondence between the networks. However, there are currently no efficient algorithms for solving this problem. To illustrate the possibilities and challenges of such problems, we use an algorithm that can exploit a partially known correspondence and show via varied simulations and applications to Drosophila and human connectomes that this approach can achieve good performance.

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Year:  2019        PMID: 31059426      PMCID: PMC7598933          DOI: 10.1109/TPAMI.2019.2914651

Source DB:  PubMed          Journal:  IEEE Trans Pattern Anal Mach Intell        ISSN: 0098-5589            Impact factor:   6.226


  12 in total

1.  An eigenspace projection clustering method for inexact graph matching.

Authors:  Terry Caelli; Serhiy Kosinov
Journal:  IEEE Trans Pattern Anal Mach Intell       Date:  2004-04       Impact factor: 6.226

2.  A probabilistic approach to spectral graph matching.

Authors:  Amir Egozi; Yosi Keller; Hugo Guterman
Journal:  IEEE Trans Pattern Anal Mach Intell       Date:  2013-01       Impact factor: 6.226

3.  A (sub)graph isomorphism algorithm for matching large graphs.

Authors:  Luigi P Cordella; Pasquale Foggia; Carlo Sansone; Mario Vento
Journal:  IEEE Trans Pattern Anal Mach Intell       Date:  2004-10       Impact factor: 6.226

4.  A path following algorithm for the graph matching problem.

Authors:  Mikhail Zaslavskiy; Francis Bach; Jean-Philippe Vert
Journal:  IEEE Trans Pattern Anal Mach Intell       Date:  2009-12       Impact factor: 6.226

5.  On convex relaxation of graph isomorphism.

Authors:  Yonathan Aflalo; Alexander Bronstein; Ron Kimmel
Journal:  Proc Natl Acad Sci U S A       Date:  2015-02-23       Impact factor: 11.205

6.  Challenging the Time Complexity of Exact Subgraph Isomorphism for Huge and Dense Graphs with VF3.

Authors:  Vincenzo Carletti; Pasquale Foggia; Alessia Saggese; Mario Vento
Journal:  IEEE Trans Pattern Anal Mach Intell       Date:  2017-04-24       Impact factor: 6.226

7.  Mixed Membership Stochastic Blockmodels.

Authors:  Edoardo M Airoldi; David M Blei; Stephen E Fienberg; Eric P Xing
Journal:  J Mach Learn Res       Date:  2008-09       Impact factor: 3.654

8.  The complete connectome of a learning and memory centre in an insect brain.

Authors:  Katharina Eichler; Feng Li; Ashok Litwin-Kumar; Youngser Park; Ingrid Andrade; Casey M Schneider-Mizell; Timo Saumweber; Annina Huser; Claire Eschbach; Bertram Gerber; Richard D Fetter; James W Truman; Carey E Priebe; L F Abbott; Andreas S Thum; Marta Zlatic; Albert Cardona
Journal:  Nature       Date:  2017-08-09       Impact factor: 49.962

9.  Graph Matching: Relax at Your Own Risk.

Authors:  Vince Lyzinski; Donniell E Fishkind; Marcelo Fiori; Joshua T Vogelstein; Carey E Priebe; Guillermo Sapiro
Journal:  IEEE Trans Pattern Anal Mach Intell       Date:  2016-01       Impact factor: 6.226

10.  A subgraph isomorphism algorithm and its application to biochemical data.

Authors:  Vincenzo Bonnici; Rosalba Giugno; Alfredo Pulvirenti; Dennis Shasha; Alfredo Ferro
Journal:  BMC Bioinformatics       Date:  2013-04-22       Impact factor: 3.169

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  1 in total

1.  Matchability of heterogeneous networks pairs.

Authors:  Vince Lyzinski; Daniel L Sussman
Journal:  Inf inference       Date:  2020-01-06
  1 in total

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