| Literature DB >> 31057601 |
Debparna Nandy1, Nidhi Sharma1, Sabyasachi Senapati1.
Abstract
Background: Surfactant protein D (SFTPD) is a lung specific protein which performs several key regulatory processes to maintain overall lung function. Several infectious and immune mediated diseases have been shown to be associated with SFTPD. Recent findings have suggested the serum concentration of SFTPD can be used as a diagnostic or prognostic marker for chronic obstructive pulmonary disease (COPD) and acute exacerbation COPD (AECOPD). But these findings lack replication studies from different ethnic populations and meta-analysis, to establish SFTPD as reliable diagnostic or prognostic biomarker for COPD and associated conditions.Entities:
Keywords: AECOPD; COPD; SFTPD; meta-analysis; rs721917
Year: 2019 PMID: 31057601 PMCID: PMC6479180 DOI: 10.3389/fgene.2019.00339
Source DB: PubMed Journal: Front Genet ISSN: 1664-8021 Impact factor: 4.599
Figure 1Flow–diagram for the literature search procedure performed for meta-analysis.
Summarized results for association of serum SFTPD concentration with COPD and AECOPD.
| 1. | 6 | Overall COPD | 2109/464 | 39.26 [36.97, 41.54] | 33.65 | <0.0001 | 11 | 0.34 |
| 2. | 2 | Acute exacerbation COPD (AECOPD) | 53/114 | 130.41[114.62, 46.20] | 16.19 | <0.00001 | 0 | 0.36 |
Figure 2Forest plots showing results of meta-analysis to assess the association of serum SFTPD concentration with (A) Overall COPD, and (B) AECOPD. The Mean Difference between the COPD subjects and controls were used for estimating the variation among the same. Fixed model was used for meta-analysis as there were negligible study heterogeneity (I2 < 50%), in both the analyses.
Results of meta-analysis for alleles and genotypes of rs721917 under different genetic models.
| 1. | Allelic model (T vs. C) | COPD | 3 | 668/656 | 1.34 [1.07,1.67] | 0.01 | 0 | 0.73 |
| AECOPD | 2 | 544/426 | 1.41 [1.09, 1.83] | 0.009 | 0 | 0.98 | ||
| 2. | Dominant model | COPD | 3 | 334/328 | 1.41 [1.00, 1.99] | 0.05 | 0 | 0.72 |
| AECOPD | 2 | 272/213 | 1.50 [1.01, 2.23] | 0.04 | 0 | 0.58 | ||
| 3. | Recessive model | COPD | 3 | 334/328 | 0.60 [0.39, 0.94] | 0.02 | 22 | 0.28 |
| AECOPD | 2 | 272/213 | 0.55 [0.33, 0.92] | 0.02 | 54 | 0.14 | ||
| 4a. | Additive model | COPD | 3 | 162/150 | 1.88 [1.15, 3.09] | 0.01 | 0 | 0.49 |
| 4b. | Additive model | COPD | 3 | 293/264 | 1.30 [0.90, 1.86] | 0.16 | 0 | 0.62 |
| 4c. | Additive model | COPD | 3 | 213/140 | 1.51 [0.96, 2.38] | 0.08 | 37 | 0.20 |
All analyses were done using Fixed effect model.
Figure 3Forest plots showing results of meta-analysis to assess the association of SFTPD alleles (rs721917-T) with (A) Overall COPD, and (B) AECOPD; where meta-Odds Ratio was calculated based on the previously reported data. Fixed model statistics was used for meta-analysis as no study heterogeneity (I2 = 0) was observed.