| Literature DB >> 31053737 |
Frank H Arthur1, William R Morrison2, Amy C Morey3.
Abstract
Prostephanus truncatus (Horn) (Coleoptera: Bostrichidae), is a beetle that is a member of a family that is primarily comprised of wood-boring insects, including forest insect pests. It is native to Mexico and Central America, where it has adapted to become a pest of stored maize. It was accidentally introduced into Africa in late 1970s, where it quickly spread throughout the sub-Saharan region, perhaps aided by adaptation to alternate hosts and the ability to persist in non-agricultural habitats. We used the correlative modelling algorithm, MaxEnt, to identify global areas of potential high suitability based on the climate locations with documented populations. Predictions using a model trained in Mexico + Central America showed potential high climatic suitability extending north into the southern United States and southward into South America, including parts of Argentina, but predictions using a model built from African occurrences did not include those areas as highly suitable. However, there was general agreement in both models that large areas of the tropics in the Western Hemisphere and in Asia have climatic conditions that could support P. truncatus if it were to become established. The models also showed consistency in capturing potential suitability at sites not used to build a given model. Results can be used as an initial guide to establish surveillance programs to monitor for this insect in high risk areas where it is not currently found, and to proactively mitigate the biosecurity risk from P. truncatus.Entities:
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Year: 2019 PMID: 31053737 PMCID: PMC6499817 DOI: 10.1038/s41598-019-42974-5
Source DB: PubMed Journal: Sci Rep ISSN: 2045-2322 Impact factor: 4.379
Environmental variables and parameters used in MaxEnt models of Prostephanus truncatus. Environmental variables were from the WorldClim dataset (www.worlclim.org/bioclim) and limited to those with a |r| < 0.7 within the area of model development. Regularization and feature combinations were selected for each model based on the lowest AICc value. Resampling method was selected based on sample size and study objective (spatial transferability). Model names refer to the dataset (with n occurrences) used to develop the model.
| Model |
| Environmental variablesa | Regularization multiplier (β) | Features | Data partitioning methodb |
|---|---|---|---|---|---|
| Mexico + Central America (native range) | 32 | BIO3, BIO5, BIO6, BIO12, BIO15 | 1.5 | hinge | |
| Africa (invaded range) | 69 | BIO3, BIO5, BIO6, BIO12, BIO18, BIO19 | 1.0 | linear, product, quadratic | block |
aBIO3 = Isothermality; BIO5 = Max Temperature of Warmest Month; BIO6 = Min Temperature of Coldest Month; BIO12 = Annual Precipitation; BIO15 = Precipitation Seasonality; BIO18 = Precipitation of Warmest Quarter; BIO19 = Precipitation of Coldest Quarter.
bpartitioning was done using the R package ‘ENMeval’[43].
Summary of climatic variables in the native (Mexico and Central America) and introduced (Africa) range of P. truncatus. Means (±SE) are presented for variables provided to one or both of the models. An asterisk indicates a significant (P < 0.05) difference between the regions for a given variable if it was used in both final models.
| Climate Variablea | Mexico and Central America | Africa |
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| Mean ± SE | Mean ± SE | |||
| BIO3 | 203.9 ± 4.8 | 220.4 ± 4.6 | 1.97 | 0.05 |
| BIO5 | 229.2 ± 11.4 | 241.9 ± 11.1 | 0.64 | 0.52 |
| BIO6 | 12.0 ± 1.8 | 9.8 ± 1.3 | 0.83 | 0.41 |
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| BIO15 | 332.6 ± 4.5 | — | — | — |
| BIO18 | — | 245.2 ± 3.2 | — | — |
| BIO19 | — | 232.4 ± 5.4 | — | — |
aFor a definition of each variable and associated units, please see the materials and methods.
Evaluation and similarity metrics for MaxEnt models of Prostephanus truncatus. Metrics were generated in R (‘ENMeval’[43] and ENMTools[48]. Similarity indices (Schoener’s D and I) compared the projection areas remaining after MESS exclusion (see methods) between the two models.
| Model | AUCTESTa | AUCDIFFb | ORMTPc | OR10d | MTP10e | Schoener’s |
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|---|---|---|---|---|---|---|---|
| Mexico + Central America (native range) | 0.751 | 0.116 | 0.031 | 0.219 | 0.342 | 0.606 | 0.883 |
| Africa (invaded range) | 0.593 | 0.179 | 0.059 | 0.294 | 0.216 |
aAUCTEST measures the ability of the model to distinguish the occurrence points used in model testing from background points with 1.0 being perfect discrimination.
bAUCDIFF is the difference between the AUC using test and training occurrences; high differences indicate model overfitting.
cORMTP is the omission rate for the proportion of test locations with suitability values lower than the smallest value predicted for any training location (minimum training presence; MTP); overfitting is indicated by deviations from the expectation of zero.
dOR10 is the omission rate for the proportion of test locations with suitability values lower than the smallest value after excluding the lowest 10% of training suitability values (10% training omission rate); overfitting is indicated by deviation from the expectation 0.10.
eMTP10 is the minimum predicted logistic value for the training sites after excluding the lowest 10% of training site values.
Figure 1Forecasted geographic suitability of Prostephanus truncatus based on temperature and moisture. The first two columns show the predicted suitability projected in various regions from two different MaxEnt models: (A) a model trained using occurrence and background locations from the native range of P. truncatus in Mexico + Central America and, (B) a model trained using occurrence and background locations from the invaded range of P. truncatus in Africa. The third column (far right) shows regions where the two models overlap (dark grey) in projected suitability based on their respective 10% minimum training thresholds (Table 3). Light grey areas in all maps indicate areas removed from model projection based on MESS (see Materials and Methods and Fig. S1). Green dots are documented records of occurrence (see Table S1).
Counts of occurrence records for Prostephanus truncatus (see Table S1) in relation to various categories of predicted suitability in each model. See Material and Methods for full description of each model.
| Model | Occurrence record dataset | |||||||||||||
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| Mexico/Central America (n=32) | Africa (n=69) | |||||||||||||
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| Africa | 22 | 10 | 6 | 14 | 1 | 1 | 0 | 69 | 0 | 7 | 28 | 13 | 14 | 7 |
| Mexico + C. America | 32 | 0 | 0 | 7 | 9 | 15 | 1 | 38 | 31 | 1 | 13 | 9 | 14 | 1 |
| Consensus | 16 | 16 | n/a | n/a | n/a | n/a | n/a | 24 | 45 | n/a | n/a | n/a | n/a | n/a |
*The suitability space for the binary Consensus model was considered here as those areas that both models predicted suitable, based on their respective 10 percent minimum training presence logistic threshold (i.e., dark grey areas in Fig. 1c). The suitability space for the remaining two models were those areas with a continuous suitability value >0 (i.e., colored areas in Fig. 1a-b).
Areas of suitability for P. truncatus as predicted by the Mexico + Central America and African models.
| Model training region | Suitability Class | Area (km2) | Proportion of total projection areaa |
|---|---|---|---|
| Mexico + Central America | <21 | 376,379 | 0.013 |
| 21–40 | 8,426,985 | 0.281 | |
| 41–60 | 12,285,599 | 0.410 | |
| 61–80 | 7,803,100 | 0.260 | |
| 81–100 | 1,066,489 | 0.035 | |
| Total | 29,958,552 | ||
| Africa | <21 | 4,505,269 | 0.170 |
| 21–40 | 15,324,383 | 0.577 | |
| 41–60 | 4,389,318 | 0.165 | |
| 61–80 | 1,844,947 | 0.069 | |
| 81–100 | 513,238 | 0.019 | |
| Total | 26,577,154 |
Suitability class, area, and proportion of total global projection area are listed for each model. Expected proportion of total projection area was assumed to be 0.2 for each class within each model under the null hypothesis. Significant deviations from the null hypothesis are denoted by an asterisk (χ2-test, Bonferroni correction). For both models, there were no areas predicted as 0 suitability within our areas of projection.
aTotal area where overlap between the two models forecasted suitability >0.0 was 18,509,504 km2. The proportion of the Africa model in agreement with the Central America model was 0.70. The proportion of the Central America model in agreement with the Africa model was 0.62.