Tyler K Lytle1, Li-Wei Chang2, Natalia Markiewicz1, Sarah L Perry2,2, Charles E Sing1,1. 1. Department of Chemistry, Department of Chemical and Biomolecular Engineering, and Beckman Institute, University of Illinois at Urbana-Champaign, Urbana, Illinois 61801, United States. 2. Department of Chemical Engineering and Institute for Applied Life Sciences, University of Massachuestts Amherst, Amherst, Massachusetts 01003, United States.
Abstract
Charged polymers are ubiquitous in biological systems because electrostatic interactions can drive complicated structure formation and respond to environmental parameters such as ionic strength and pH. In these systems, function emerges from sophisticated molecular design; for example, intrinsically disordered proteins leverage specific sequences of monomeric charges to control the formation and function of intracellular compartments known as membraneless organelles. The role of a charged monomer sequence in dictating the strength of electrostatic interactions remains poorly understood despite extensive evidence that sequence is a powerful tool biology uses to tune soft materials. In this article, we use a combination of theory, experiment, and simulation to establish the physical principles governing sequence-driven control of electrostatic interactions. We predict how arbitrary sequences of charge give rise to drastic changes in electrostatic interactions and correspondingly phase behavior. We generalize a transfer matrix formalism that describes a phase separation phenomenon known as "complex coacervation" and provide a theoretical framework to predict the phase behavior of charge sequences. This work thus provides insights into both how charge sequence is used in biology and how it could be used to engineer properties of synthetic polymer systems.
Charged polymers are ubiquitous in biological systems because electrostatic interactions can drive complicated structure formation and respond to environmental parameters such as ionic strength and pH. In these systems, function emerges from sophisticated molecular design; for example, intrinsically disordered proteins leverage specific sequences of monomeric charges to control the formation and function of intracellular compartments known as membraneless organelles. The role of a charged monomer sequence in dictating the strength of electrostatic interactions remains poorly understood despite extensive evidence that sequence is a powerful tool biology uses to tune soft materials. In this article, we use a combination of theory, experiment, and simulation to establish the physical principles governing sequence-driven control of electrostatic interactions. We predict how arbitrary sequences of charge give rise to drastic changes in electrostatic interactions and correspondingly phase behavior. We generalize a transfer matrix formalism that describes a phase separation phenomenon known as "complex coacervation" and provide a theoretical framework to predict the phase behavior of charge sequences. This work thus provides insights into both how charge sequence is used in biology and how it could be used to engineer properties of synthetic polymer systems.
Understanding the role
of monomer sequence on the physical properties
of long-chain macromolecules remains a grand challenge in the field
of polymer science,[1,2] due to the utility of sequence
as a tool to store information and drive structure formation in biological
polymers such as proteins, RNA, and DNA.[3] This takes place in a number of ways; for example, molecular storage
of genomic data is encoded in DNA via a sequence of four different
base pairs which can then be read by the protein machinery of the
cell. Proteins leverage sequences incorporating any number of roughly
20 amino acids, that then often undergo hierarchical assembly into
highly complex and precise three-dimensional structures. A subclass
of proteins known as intrinsically disordered proteins (IDPs) are
subtly different, in that they tend not form secondary or higher-order
structures; however, IDPs remain crucial to biological structure and
function.[4,5] Despite this lack of hierarchical order,
recent work has shown that the precise sequence of charged amino acids
still plays a defining role in the structure and function of IDPs.[6−13] This suggests that the physical effects of charged monomer sequences
are generally relevant for a broad range of polymeric materials, not
limited to biological molecules; however, the underlying physics of
these sequence-dependent electrostatic interactions is not well understood.Many recent efforts to understand sequence-dependent polymers have
focused on biological systems, in particular, intracellular structures
known as membraneless organelles or biomolecular condensates.[9,14−20] Membraneless organelles are intracellular compartments that consist
largely of IDPs[9,14−16,18,19,21] and are often driven by interactions with oppositely charged polymers
such as RNA.[7,22−24] A flurry of
recent simulation and theory work has begun to model this class of
biomacromolecular systems, mostly focusing on uncovering correlations
between physical quantities over a vast and complex amino acid parameter
space.[6,10,25−31] Despite this progress, there remains a need to develop bottom-up
theory and simulation that can elucidate the physics of sequence-dependent
phase behavior and to do so generally enough that the promise of sequence-defined
polymers can be realized in nonbiological systems.[32−42]In this spirit of understanding sequence-dependent interactions
in nonbiological systems, we turn to a class of polyelectrolyte solutions
known as polymeric complex coacervates, which are
considered analogous to membraneless organelles. Coacervates consist
of oppositely charged polymers (a polycation and a polyanion) in an
aqueous salt solution.[43−45] The charge-driven association between the polyelectrolytes
drives a phase separation process, forming a polymer-dense coacervate phase and a polymer-dilute supernatant phase (Figure a
inset). This phase behavior is commonly plotted on a salt concentration
versus polymer concentration phase diagram (Figure a),[46−48] with coacervation occurring in
a two-phase region at low salt and polymer concentrations. A tie line
in this region connects the polymer-dense coacervate (Figure a, α) to the polymer-dilute
supernatant phase (Figure a, β).[47,49−51]
Figure 1
(a) Example coacervate
phase diagram, calculated from the transfer
matrix theory of Lytle and Sing[90] described
in eq . The area in
the bottom left half of the plot is a two-phase (2Φ) region
where coacervation occurs along tie lines that connect the polymer-dense
coacervate phase (α) to a polymer-dilute supernatant phase (β).
The negative slope of the tie line reflects the preferential partitioning
of salt to the supernatant phase. The inset shows an optical micrograph
of this phase separation, formed from sequence-controlled peptides
of poly(lysine-co-glycine) and poly(glutamate) with
the coacervate α and supernatant β phases indicated. (b)
Simulation snapshot of coacervation, showing the polymer-dense coacervate
phase α and polymer-dilute supernatant phase β, at concentrations
that reflect the indicated tie line in (a). (c) Schematic of a coacervate
phase, showing a test polycation (orange). The transfer matrix theory
in this paper is concerned with the adsorption of oppositely charged
species to this chain, as shown in the simplified representation shown
at the bottom. (d) The sequences used in this paper (A–P),
along with the homo-polyanion (blue) that is partnered with the polycation
sequences. Sequences can be characterized by parameters such as charge
fraction fC and average “run”
length ⟨nr⟩; however, sequences
are not uniquely characterized by these two parameters.
(a) Example coacervate
phase diagram, calculated from the transfer
matrix theory of Lytle and Sing[90] described
in eq . The area in
the bottom left half of the plot is a two-phase (2Φ) region
where coacervation occurs along tie lines that connect the polymer-dense
coacervate phase (α) to a polymer-dilute supernatant phase (β).
The negative slope of the tie line reflects the preferential partitioning
of salt to the supernatant phase. The inset shows an optical micrograph
of this phase separation, formed from sequence-controlled peptides
of poly(lysine-co-glycine) and poly(glutamate) with
the coacervate α and supernatant β phases indicated. (b)
Simulation snapshot of coacervation, showing the polymer-dense coacervate
phase α and polymer-dilute supernatant phase β, at concentrations
that reflect the indicated tie line in (a). (c) Schematic of a coacervate
phase, showing a test polycation (orange). The transfer matrix theory
in this paper is concerned with the adsorption of oppositely charged
species to this chain, as shown in the simplified representation shown
at the bottom. (d) The sequences used in this paper (A–P),
along with the homo-polyanion (blue) that is partnered with the polycation
sequences. Sequences can be characterized by parameters such as charge
fraction fC and average “run”
length ⟨nr⟩; however, sequences
are not uniquely characterized by these two parameters.Sequence effects similar to those found in IDPs
and membraneless
organelles are indeed observed in coacervate-forming systems.[52] The effects of sequence on coacervation were
explored using mixtures of a homo-polyanion with different sequence-specific
polycations containing a 50% mixture of charged and uncharged monomers.[52] Regular polycation sequences, ranging from fully
alternating to “blocky” copolymers exhibited significant
differences in phase behavior and thermodynamics as determined by
both experiment and simulation.[52] This
established a clear connection between charged monomer sequence and
coacervate thermodynamics, but prior work has only explored a very
limited area of sequence space;[52] there
is a need to develop predictive tools to connect arbitrary sequences to the strength of electrostatic interactions.Theory
is an ideal tool to rapidly explore and understand this
sequence space; however, historical efforts to theoretically describe
complex coacervation are not well-suited to understanding or predicting
the effect of charged monomer sequence. The original coacervation
theory developed by Voorn and Overbeek accounted for charged interactions
only through the Debye–Hückel attraction that arises
in unconnected, dilute electrolytes.[46−48,53] Increasingly sophisticated field theoretic methods have since made
an effort to address these shortcomings,[54−60] with parallel efforts using liquid state theory,[61−63] blob arguments,[64−67] and other related theoretical[68−70] and computational[71−73] methods. While these assorted theoretical efforts have all contributed
to the basic understanding of experimental results on coacervates,[46,74−87] they struggle to resolve monomer-level details important for considering
monomer to monomer sequence in coacervation.We have demonstrated
the sensitivity of coacervation to monomer-level
structure in previous studies,[50,88,89] which show how polymer charge spacing, stiffness, and architecture
can play a marked role in determining phase behavior (example snapshot
in Figure b). Informed
by our simulation results, we have developed a new transfer matrix
approach that predicts coacervation in a way that reflects these important
molecular features.[51,88,90] This model keeps track of the oppositely charged ions and polyelectrolytes
surrounding a test polyelectrolyte, by mapping to
an adsorption model; here, the test polyelectrolyte
is a series of monomeric adsorption sites to which the oppositely
charged species bind (see schematic in Figure c).[90] The resulting
free energy expression for coacervation is thus:[90]This expression is
comprised of three terms; the first term is
the translational entropy of all the species i, the
second term is the transfer matrix expression for the interactions
between charged polymers and their surroundings, and the final term
is a phenomenological expression for the nonpairwise excluded volume.
The subscript i = P, S, W denotes the polyelectrolyte, salt ion, and water
species, respectively. A plus (“+”) or minus “–”)
may be necessary to distinguish positively or negatively charged species,
if these are asymmetric. ϕ is the
volume fraction of species i, N is the degree of polymerization, and Λ is a correction factor for the effective
excluded volume. ζ is a phenomenological constant to account
for the nonpairwise excluded volume. The transfer matrix M0 is comprised of the Boltzmann factors related to the
adsorption of the various charged species (Figure c), counterions C, the initial
oppositely charged monomers P′, and subsequent
monomers along the same chain P, and unpaired sites
0. By distinguishing P and P′,
we take into account the possibility of oppositely charged polyelectrolytes
adsorbing sequentially along the test chain. In this way we can write
the grand canonical partition function for the polyelectrolyte interaction
with its surroundings, , which is the term in the interaction term
of . The form of
this matrix has been previously
derived,[51,88,90] and we denote
it with a subscript 0 to indicate that this is for an unpatterned,
homo-polyelectrolyte test chain:Here, the first version of the
matrix shows
the pair of sequences that the matrix element represents (i.e., a C after a P′ would be the CP′ element). D = e–ϵ accounts for the electrostatic energy
penalty when charges along the test chain are “unpaired”.
The vector ψ1 = [C, P, P′, 0] = [A0ϕ, 0, B0ϕ, D] is the set of Boltzmann
factors for the very first monomer on a chain, and ψ0 is a vector of ones. The form of the terms A0ϕ and B0ϕ are described in
our previous work.[51,88,90]In this paper, we show how this approach can be generalized
to
account for coacervates formed from monodisperse but arbitrary sequences. We compare transfer matrix results directly with experiment
and simulation, and observe qualitative agreement for a wide variety
of test sequences. Subtle changes in monomer sequence can affect the
strength of electrostatic interactions between oppositely charged
polyelectrolytes and the resulting phase behavior.
Results and Discussion
Polycation
Sequence Space
We show in Figure d a schematic of the total
range of polycation sequences we use in this paper, along with the
fully charged homo-polyanion that was paired with the polycations
in each coacervate. Experimentally, these sequences were prepared
using solid phase synthesis of poly(lysine-co-glycine)
and poly(glutamate) (see Supporting Information for details). All of these sequences have between 48 and 50 monomers,
with a variety of charge fractions fC and
an average length “run” of charged monomers ⟨nr⟩, indicated on Figure d. We note that these types of averaged variables
do not uniquely define a sequence; for example, sequences C, L, M,
and N have the same total number and type of runs, only spaced out
with different combinations of neutral monomer runs or “spacers”.
Therefore, to identify the different sequences, we assign a letter
to them in Figure d that will be used to denote points associated with a given sequence
later in the paper. We do point out a few sequence-based trends that
we will focus on: (Blockiness) we change the periodicity of sequence
polymers with the same number of charged, neutral monomers in runs
(A–D). This trend was the basis of our prior work.[52] (Constant Runs) we examine a constant set six
runs of four adjacent, charged monomers and change how the neutral
spacer monomers are distributed in-between (C, K–M, D). (Constant
Spacers) we keep a constant set of six runs of four neutral monomer
spacers and change how the charged monomers are distributed in-between
(C, N–P, D). Finally, (Constant Runs, Constant Number of Charges)
we keep a constant set of runs of four adjacent, charged monomers
and change the number of neutral monomer spacers while keeping the
overall number of charges per chain constant (not included in Figure d, but represented
later). We note that, for this manuscript, all polymers are monodisperse
in size and sequence in both theory and simulation,
and have very low polydispersity in experiments.
Simulation
and Experiment Exhibit Sequence-Dependent Coacervation
In
looking to understand the nuanced effects of chemical sequence,
we first performed a direct comparison between simulation and experiment.
Coacervate phase diagrams were calculated using thermodynamic integration
of Monte Carlo simulations[91] using a combination
of box size-changes[92,93] and Widom insertion[91,94] to calculate the excess free energy along both the polymer (polyanion
and sequenced polycation) and salt species respectively (see Supporting Information for details). This approach
uses the same simulation model as reported previously.[50−52,88] This model uses a bead–rod
representation of charged polymers in an implicit solvent, which is
a standard coarse-grained approach that highlights the physical effects
due primarily to electrostatics and is agnostic to any specific chemistry.
We can qualitatively compare the binodal phase diagrams resulting
from these simulations to experimentally determined measures of the
phase behavior (Figure ).
Figure 2
(a) Salt concentration cS versus polymer
concentration cP phase diagram of coacervation
measured from simulation (points) and transfer matrix theory (lines)
for polycations with sequences A–D, F, and H interacting with
a homo-polyanion. An example set of tie lines are shown for sequence
A (dashed line, simulation and dotted line, theory), with both exhibiting
a small negative slope consistent with prior literature.[50,73] Simulation tie lines are also shown for other sequences at concentrations
outside the binodal of sequence A, demonstrating that sequence does
not alter the sign of the slope. The critical salt concentration as
measured by theory cS0 is measured at the largest concentration of
salt observed in the supernatant phase for each sequence. (b) Simulation
snapshots representative of the points in (a) for sequences H, A,
D, and F. The polycation is orange, the polyanion is blue, the cation
is purple, and the anion is red. Neutral beads for the polycation
are shown with smaller beads connected by rods. (c) Simulation and
theory values for salt resistance (left axis, cS0) qualitatively
compare well with experimentally measured values of cS0 obtained at 1 mM polymer for sequences A–D, showing
that we can use theory and simulation to capture sequence variations
described by an increase in charge block size (Blockiness). (d) Schematic
highlighting counterion localization for two different sequences.
For a sequence with a large ⟨nr⟩ (D), the counterions are locally confined near the charged
blocks. In contrast, counterions are more uniformly localized along
the chain for sequences with a small ⟨nr⟩ (B). The red circle represents the cutoff radius, rC. If a salt ion is within this rC of a monomer, the salt ion is considered localized.
(a) Salt concentration cS versus polymer
concentration cP phase diagram of coacervation
measured from simulation (points) and transfer matrix theory (lines)
for polycations with sequences A–D, F, and H interacting with
a homo-polyanion. An example set of tie lines are shown for sequence
A (dashed line, simulation and dotted line, theory), with both exhibiting
a small negative slope consistent with prior literature.[50,73] Simulation tie lines are also shown for other sequences at concentrations
outside the binodal of sequence A, demonstrating that sequence does
not alter the sign of the slope. The critical salt concentration as
measured by theory cS0 is measured at the largest concentration of
salt observed in the supernatant phase for each sequence. (b) Simulation
snapshots representative of the points in (a) for sequences H, A,
D, and F. The polycation is orange, the polyanion is blue, the cation
is purple, and the anion is red. Neutral beads for the polycation
are shown with smaller beads connected by rods. (c) Simulation and
theory values for salt resistance (left axis, cS0) qualitatively
compare well with experimentally measured values of cS0 obtained at 1 mM polymer for sequences A–D, showing
that we can use theory and simulation to capture sequence variations
described by an increase in charge block size (Blockiness). (d) Schematic
highlighting counterion localization for two different sequences.
For a sequence with a large ⟨nr⟩ (D), the counterions are locally confined near the charged
blocks. In contrast, counterions are more uniformly localized along
the chain for sequences with a small ⟨nr⟩ (B). The red circle represents the cutoff radius, rC. If a salt ion is within this rC of a monomer, the salt ion is considered localized.The phase boundaries in Figure a exhibit the same
trend observed by Chang et al.,[52] with
minor differences due to the different
methods for calculating phase diagrams (see discussion in the Supporting Information). Our results highlight
that an increase in blockiness ⟨nr⟩ and charge fraction fC generally
leads to a marked increase in the two-phase region of the phase diagram,
indicating that phase separation is enhanced by stronger electrostatic
attractions. Figure b shows characteristic snapshots from simulations performed at a
constant number of charged monomers for sequences H, A, D, and F,
visually highlighting how an increased value of cS0 leads to
stronger phase separation and a denser coacervate phase.Further
analysis of simulation results also suggested that electrostatic
cooperativity resulting from an increase in ⟨nr⟩ enhances the localization of counterions at
high charge-density locations along the polyelectrolyte chain (Figure d). An important
consequence of this increase in counterion confinement is a commensurate
increase in the entropy resulting from the release of these bound
counterions upon complexation with an oppositely charged polymer.[52]Because of the correlation between increases
in the strength of
the electrostatic attraction, counterion localization, and the size
of the two-phase region, we can use the highest salt concentration
where we observe phase separation, cS0, as a simple descriptor
of the system (Figure a). This parameter also allows for comparison with experimental data,
via the “salt resistance” cS,E0 which is the
salt concentration at which miscibility is observed for a fixed overall
polymer concentration cP = 1 mM. cS0 and cS,E0 represent different parts of the phase diagram
and thus have different numerical values; however we show in the Supporting Information that they are highly correlated
and can be used to compare qualitative trends. The reasoning for using
these different quantities is discussed in the Supporting Information, along with the demonstration that
direct comparison of simulation and experimental values of the same
metric (cS,E0) indeed yields similar numerical results. Figure c demonstrates that
the size of the two-phase region, as measured by either the salt resistance cS,E0 from experiments or cS0 from simulations, systematically increased
with increasing blockiness ⟨nr⟩
for constant charge fraction fC, (i.e.,
sequences A–D).The results in Figure a also include example tie lines connecting
coexisting coacervate
and supernatant phases. It is noteworthy that we observe tie lines
with a negative slope, indicating that the coacervate phase has a
lower salt concentration than the supernatant.[50,51,73,88,90,95] This preferential partitioning
of salt out of the dense, polymer-rich coacervate phase has been previously
attributed to the excluded volume of the polyelectrolyte species,[50,51,73,88,90,95] and has been
confirmed experimentally.[50,73]
Theory of Monomer Sequence
in Polymeric Complex Coacervation
Results from simulations
suggested that we can capture the relevant
physics dictating the effects of charge sequence on coacervate phase
behavior by considering how counterions interact with a single polymer
chain. Therefore, we extend the transfer matrix theory of complex
coacervation to include the effects of charged monomer sequence.[51,88,90] This method is particularly applicable
because, for most coacervates, the concentration of charged species
is sufficiently high that standard Debye–Hückel or Poisson–Boltzmann
electrostatics are no longer applicable,[50,53,96] and correlations are primarily due to charge
connectivity and nearest-neighbor pairing.[50,97]To extend the transfer matrix formalism to describe sequence
effects in coacervation, the electrostatic association strength ϵ
becomes a function of the specific monomer position along the test
polycation chain. This accounts for the variation in local electrostatic
environment, and specifically the energetic penalty for an unpaired
ion, for a particular monomer sequence.[51,90] Thus, the Dhomo = D0 exp(−ϵ0) that in the homo-polyelectrolyte theory contains a constant
ϵ0, now is written with a contribution ϵ1 that depends on the monomer index s, Dpattern = Dhomo exp(−ϵ1(s)).To calculate the value of ϵ1(s), we use Monte Carlo simulations of single
polyelectrolytes in a
dilute salt solution to determine the adsorption characteristics of
a test polyelectrolyte it in a reservoir of salt ions (see the Supporting Information for simulation details).
The localization of salt ions near charged polycation blocks, and
thus the local strength of electrostatic interactions, is calculated
by defining a region around the chain defined by a cutoff radius rC (Figure d).[98] This charge localization
is energetically favorable due to electrostatic attractions,[98−100] and there is thus an increased number density nC(s) of opposite charges within rC at a given chain monomer s.[52] We define an electrostatic energy
that accounts for this increase in local correlations as the aforementioned
ϵ = ϵ0 + ϵ1(s). We demonstrate that ϵ(s) can be determined
from simulation using the relationship ϵ(s)
= −ln nC(s)/n(s) (see Supporting Information), where n(s) is the number
density of opposite charges within rC in
the absence of electrostatic interactions. This method thus only requires
two single-chain simulations (one with electrostatics and one without)
at low (but nonzero) salt concentrations, and we show in the Supporting Information that the value of ϵ(s) is independent of the choice of salt concentration in
this limit. Figure a shows typical landscapes (ϵ(s)) for patterns
A–D, as well as the homo-polyanion, where we denote charged
monomers with closed symbols and neutral monomers with open symbols.
We take D0 = 1 and ϵ0 = 0, in agreement with the theory for homo-polyelectrolyte coacervates.[90]
Figure 3
(a) Monomer-dependent energy ϵ(s) as a function
of the chain index, measured by single-polyelectrolyte simulations
in dilute salt solution. Variations in ϵ(s)
reflect the different electrostatic environments associated with monomers
in different positions along the chain. ϵ(s) is plotted here for sequences A–D, which reflects variation
in sequence periodicity ranging from alternating charged/uncharged
monomers (A) to blocks of eight charged/uncharged monomers (D). Filled
symbols represent charged monomers in the sequence, and open symbols
represent neutral monomers. The homo-polyanion is also plotted as
the dark red line in each graph. We note that, for the blockiest polycation
sequences, ϵ(s) approaches the homo-polyanion
behavior in the center of the block. (b) Schematic illustrating how
the variation in ϵ(s) is incorporated into
the transfer matrix theory. Ξseqint is the grand canonical partition function
associated with polymer–polymer interactions. It is composed
of products of “runs” of charge, as shown explicitly
in the expression given below the schematic; here, the colors are
associated with the indicated charged monomer runs: 1 (purple), 5–8
(red), and 10–11 (blue).
(a) Monomer-dependent energy ϵ(s) as a function
of the chain index, measured by single-polyelectrolyte simulations
in dilute salt solution. Variations in ϵ(s)
reflect the different electrostatic environments associated with monomers
in different positions along the chain. ϵ(s) is plotted here for sequences A–D, which reflects variation
in sequence periodicity ranging from alternating charged/uncharged
monomers (A) to blocks of eight charged/uncharged monomers (D). Filled
symbols represent charged monomers in the sequence, and open symbols
represent neutral monomers. The homo-polyanion is also plotted as
the dark red line in each graph. We note that, for the blockiest polycation
sequences, ϵ(s) approaches the homo-polyanion
behavior in the center of the block. (b) Schematic illustrating how
the variation in ϵ(s) is incorporated into
the transfer matrix theory. Ξseqint is the grand canonical partition function
associated with polymer–polymer interactions. It is composed
of products of “runs” of charge, as shown explicitly
in the expression given below the schematic; here, the colors are
associated with the indicated charged monomer runs: 1 (purple), 5–8
(red), and 10–11 (blue).As expected, there is a large variation in electrostatic
attraction
along the contour of the chain due to the precise sequence of monomers.
For the sequences plotted in Figure a, sequence D exhibits the most marked variations in
ϵ(s). In this case, long runs of adjacent,
charged monomers (e.g., s = 16–23 and s = 32–39) have a value of ϵ(s) that is similar to ϵ0 for a homopolymer. As the
sequence transitions from a charged run to a neutral spacer (e.g., s = 22–26), there is a concomitant increase in ϵ(s) that we attribute to the weakening of the driving force
for charge localization. ϵ(s) decreases once
more as the neutral spacer transitions back to a charged run (e.g., s = 30 to 34). In contrast, short runs of charge or isolated,
charged monomers (such as in sequences A or B) show weak localization.
This is indicated by a larger value of ϵ(s)
with weaker oscillations. These energy landscapes ϵ(s) inform our model of sequence effects in complex coacervation.We define a new transfer matrix, that now depends on the monomer
index via the sequence-dependent epsilon:This transfer matrix
is specifically for monomers that contain
a charge, in contrast to neutral monomers along the
chain. We consider neutral monomers to only affect the free energy
of coacervation through (1) excluded volume of the monomer units and
(2) through their spacing of charges and its effect on ϵ(s) for those monomers. Neutral monomers are otherwise not
required to “pair” with an opposite charge, and their
contribution to the transfer matrix calculation is as an identity
matrix M = I. We can use this set of matrices to write a new grand canonical
partition function . This can be simplified, since when for neutral monomers, the product is simply
an identity matrix. This means that the system can be divided into
a product over a series of charge “runs”, or adjacent
charges, of length n.We schematically show how this calculation is carried out
in Figure b. The new
interaction
free energy contribution for a patterned polymer (in this case, a
polycation) is . We thus use the free
energy for the overall
system:Here, the sequence-dependence is almost completely contained
within
the interaction term for the polycation, while the homo-polyanion
is treated as in the previous transfer matrix theory.[90] In this paper we use the parameters A0 = 35.0, B0 = 11.5, , and ζ = 16.0; these are similar
to values in prior work[51,90] but with small changes
reflecting slight differences in how we model Λ. The same parameters
are used for all sequences considered in this paper.
Sequence-Based
Transfer Matrix Theory Can Match Experimental
and Computational Phase Behaviors
Full theoretical phase
diagrams are calculated for the polyelectrolyte patterns. These demonstrate
excellent, nearly quantitative matching with the full simulation phase
diagrams shown in Figure a. In particular, we can capture how the phase diagram changes
with increasing blockiness for the constant fC = 0.5 sequences (A–D) in simulation, experiment, and
theory. This is shown in Figure c. In particular, this matching includes the significant
jumps in cS0 from B to C and C to D, concomitant with the
emergence of significant variations in ϵ(s)
in Figure a.We showed this charge blockiness effect in simulation in Chang et
al.,[52] which was attributed to the one-dimensional
confinement of charges localized along the backbone. This emerges
from our theory because the energetic parameter ϵ(s) (Figure a) corresponds
to a local one-dimensional confinement potential for counterions along
the chain.We extend this matching to the entire set of sequences
considered
in Figure d. In Figure a, we plot the experimental cS,E0 as a function of the overall charge fraction fC for sequences A–J, for coacervates formed in a NaClsalt solution from sequence-controlled polymers of poly(lysine-co-glycine) in complex with a homopoly(glutamate). We observe
large variations in cS,E0, ranging from 160 to 580 mM NaCl, showing
that charge patterns can significantly alter the strength of electrostatic
interactions. We obtain the values of c0 from simulation and theory for this same, extended set of sequences
(full phase diagrams included in the Supporting Information) and also plotted versus fC in Figure b. Both simulation and theory results exhibit nearly quantitative
matching and exhibit qualitative matching with the experimental values
observed in Figure a.
Figure 4
(a) Experimental salt resistance cS,E0 as a function
of charge fraction fC for sequences A–J,
prepared using systems of poly(lysine-co-glycine)
in complex with poly(glutamate) in a NaCl salt solution (inset), and
also a homo-polyelectrolyte coacervate fC = 1. We note that experimental data for sequence E is not included, because only solid precipitation is observed and
thus cS,E0 is not accessible. (b) Theoretical (black
circles) and simulation (red triangles) salt resistance cS0 as a function
of charge fraction fC for sequences A–J.
We note that simulation and theory are in nearly quantitative agreement,
and both qualitatively agree with the experimental trends in (a).
(a) Experimental salt resistance cS,E0 as a function
of charge fraction fC for sequences A–J,
prepared using systems of poly(lysine-co-glycine)
in complex with poly(glutamate) in a NaClsalt solution (inset), and
also a homo-polyelectrolyte coacervate fC = 1. We note that experimental data for sequence E is not included, because only solid precipitation is observed and
thus cS,E0 is not accessible. (b) Theoretical (black
circles) and simulation (red triangles) salt resistance cS0 as a function
of charge fraction fC for sequences A–J.
We note that simulation and theory are in nearly quantitative agreement,
and both qualitatively agree with the experimental trends in (a).Experiment, theory, and simulation
all exhibit the same trends.
Broadly speaking, high values of fC lead
to larger values of cS,E0 (experiment) and cS0 (theory and simulation),
corresponding to higher strengths of electrostatic interactions. This
is expected, given that there are more charges per chain and thus
more electrostatic attraction to the oppositely charged polymeric
species. Nevertheless, we note that even among the same charged fraction
there can be a wide variation in cS,E0 and cS0, as apparent in
the blockiness trend at fC = 0.5. The
opposite situation is also true, with similar values of cS0 being observed
for different values of fC. For example,
we note that the trio D, I, and F or the pair G and A show a similar
value of cS,E0 despite having different charge fractions.
These particular cases generally represent a trade-off between blockiness
and charge fraction, with less fC needed
if the sequences have longer blocks. We are able to accurately capture
this effect of precise charge sequence on the phase behavior of complex
coacervates with both theory and simulation because our theory considers
the particular charge sequence rather than average sequence metrics
such as charge fraction fC or blockiness
⟨nr⟩.
Sequence-Based
Trends
Having looked at the effect of
blockiness, we tested the ability of this theory to capture nonregular
sequences. In particular, we show this by keeping the total charge
fraction fC = 0.5 constant and maintaining
constant runs of four charges while varying neutral spacers (sequences
C, K–M, and D, i.e., constant runs). These systematically shrink
the length of one neutral spacer while increasing the length of another
(see schematic in Figure a). We do this for charge runs of length nr = 4, which represents a transition between ⟨nr⟩ = 4 and ⟨nr⟩ = 8 (sequences C and D) at the extremes. Despite
controlling for both fC and ⟨nr⟩, this variation results in a marked
change in the values of cS0 and cS,E0 for theory and experiment.
This is plotted in Figure a (circular symbols) as a function of the larger neutral linker
length ν and demonstrates that there is a transition from C
to D where intermediate values of cS0 are observed. We attribute this
change to the proximity of charge runs, which still affect each other
even when separated by a few neutral monomers, a cooperative effect
that decreases with increasing length of the neutral spacer. Indeed,
this is observed in both experiment (open, black points, cS,E0) and theory
(filled, red points, cS0).
Figure 5
(a) Salt resistance cS0 for fC =
0.5 with varying length neutral spacers, denoted by v and 8 – v, between runs of four charges
(circles) and with varying length charge blocks, denoted by v and 8 – v, separated by spacers
of four neutral monomers (triangles). Experiment (black), using sequence-controlled
poly(lysine-co-glycine) in complex with a homo-poly(glutamate)
and theory (red) exhibit qualitative matching, showing the complicated
interplay between charge block separation and length. (b) Salt resistance
for polycations with 24 total charged monomers, separated by increasingly
long neutral spacers, denoted by v.
(a) Salt resistance cS0 for fC =
0.5 with varying length neutral spacers, denoted by v and 8 – v, between runs of four charges
(circles) and with varying length charge blocks, denoted by v and 8 – v, separated by spacers
of four neutral monomers (triangles). Experiment (black), using sequence-controlled
poly(lysine-co-glycine) in complex with a homo-poly(glutamate)
and theory (red) exhibit qualitative matching, showing the complicated
interplay between charge block separation and length. (b) Salt resistance
for polycations with 24 total charged monomers, separated by increasingly
long neutral spacers, denoted by v.The next set of sequences we highlight are C, N–P,
and D.
This example of a constant spacers series is the inverse of the constant
run trend and is characterized by constant spacer length (four neutral
monomers) with variation in charged runs at a constant ⟨n⟩ = 4 and fC = 0.5. Here we observe a similar transition between
the limiting sequences C and D, plotted in Figure a as triangular symbols.We note for
both the constant run and constant spacer series, the
increase in cS,E0 and cS0 is more abrupt as the longer
charge-run length ν is increased from ν = 7 to ν
= 8, which is again observed in both experiment and theory. This demonstrates
that there is a large differential effect of moving an isolated charged
(P to D) or neutral monomer (M to D) in a larger run of the other
monomer type. This is especially apparent in the P to D transition,
which we attribute to the lack of electrostatic cooperativity of the
isolated charged monomer with respect to its neighbors in P; upon
“promoting” that monomer to be in the long, charged
block in D it gains the cooperative electrostatic attractions associated
with these blocks.We consider a final constant runs, constant
number of charges series,
where runs of four adjacent charges along the polycation have differing
numbers of neutral monomers, only now the chain length N is increased to have a constant number
of charged positive charges along the polycation. This runs from two
to eight monomers between groupings of four charged monomers. We plot cS0 and cS0 for these sequences in Figure b and show that they
decrease with the number of neutral monomers ν for both the
experiment and theory values. This further clarifies that the values
of nr and the total number of charges per chain do not, by themselves, dictate the strength
of electrostatic interactions. The neutral spacers, despite not being
directly involved with the electrostatic interactions, affect the
local charge correlations sufficiently to cause significant changes
in cS0 and correspondingly the strength of the electrostatic attractions
between the oppositely charged polyelectrolytes.
Safety Statement
No unexpected or unusually high safety
hazards were encountered.
Conclusion
We
have developed a theoretical framework for understanding the
role of polyelectrolyte charge sequence in complex coacervates. This
framework builds on a transfer matrix approach[90] that explicitly accounts for the local electrostatic environment
along a sequenced polyelectrolyte via an effective energy ϵ(i). We can capture the effects of sequence in complex coacervates,
including charge fraction and charge blockiness, as well as the more
subtle variations in charge associated with nonregular sequences.
Furthermore, we show close matching between experiment, simulation,
and theory for the wide range of sequences considered. The emerging
physical picture is that there is a trade-off between the number of
charges per chain and the blockiness of the sequence; however, the
relative position of these blocks also plays a significant role in
determining phase behavior.This computational, experimental,
and theoretical effort provides
the foundation to study a whole range of polyelectrolytes and bio-polyelectrolytes
with charge sequence. The next step is to incorporate other molecular
interactions, such as hydrogen bonding, short-range χ-interactions
and hydrophobicity, and ion-π interactions, into this theoretical
framework. This is particularly relevant to biological systems such
as IDPs, which are known to form phase-separated structures in the
cell that are sensitive to sequence. However, this may also open the
door to engineering charge sequence in synthetic polymers and to inform
the self-assembly or phase behavior of soft materials.
Authors: Samuel Lenton; Stefan Hervø-Hansen; Anton M Popov; Mark D Tully; Mikael Lund; Marie Skepö Journal: Biomacromolecules Date: 2021-03-17 Impact factor: 6.988
Authors: Jeremy Wang; Curt Waltmann; Han Umana-Kossio; Monica Olvera de la Cruz; John M Torkelson Journal: ACS Cent Sci Date: 2021-05-04 Impact factor: 14.553