Literature DB >> 31036668

Germline-restricted chromosome (GRC) is widespread among songbirds.

Anna A Torgasheva1,2, Lyubov P Malinovskaya1,2, Kira S Zadesenets1, Tatyana V Karamysheva1, Elena A Kizilova1,2, Ekaterina A Akberdina1, Inna E Pristyazhnyuk1, Elena P Shnaider3, Valeria A Volodkina4, Alsu F Saifitdinova4, Svetlana A Galkina4, Denis M Larkin5,6, Nikolai B Rubtsov1,2, Pavel M Borodin5,2.   

Abstract

An unusual supernumerary chromosome has been reported for two related avian species, the zebra and Bengalese finches. This large, germline-restricted chromosome (GRC) is eliminated from somatic cells and spermatids and transmitted via oocytes only. Its origin, distribution among avian lineages, and function were mostly unknown so far. Using immunolocalization of key meiotic proteins, we found that GRCs of varying size and genetic content are present in all 16 songbird species investigated and absent from germline genomes of all eight examined bird species from other avian orders. Results of fluorescent in situ hybridization of microdissected GRC probes and their sequencing indicate that GRCs show little homology between songbird species and contain a variety of repetitive elements and unique sequences with paralogs in the somatic genome. Our data suggest that the GRC evolved in the common ancestor of all songbirds and underwent significant changes in the extant descendant lineages.

Keywords:  Passeriformes; avian genome; chromosome evolution; meiosis; programmed DNA elimination

Year:  2019        PMID: 31036668      PMCID: PMC6575587          DOI: 10.1073/pnas.1817373116

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  32 in total

Review 1.  B-chromosome evolution.

Authors:  J P Camacho; T F Sharbel; L W Beukeboom
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2000-02-29       Impact factor: 6.237

2.  MicroMeasure: a new computer program for the collection and analysis of cytogenetic data.

Authors:  A Reeves
Journal:  Genome       Date:  2001-06       Impact factor: 2.166

3.  BLAT--the BLAST-like alignment tool.

Authors:  W James Kent
Journal:  Genome Res       Date:  2002-04       Impact factor: 9.043

Review 4.  Repbase Update, a database of eukaryotic repetitive elements.

Authors:  J Jurka; V V Kapitonov; A Pavlicek; P Klonowski; O Kohany; J Walichiewicz
Journal:  Cytogenet Genome Res       Date:  2005       Impact factor: 1.636

5.  FISH on avian lampbrush chromosomes produces higher resolution gene mapping.

Authors:  Svetlana Galkina; Svetlana Deryusheva; Valerie Fillon; Alain Vignal; Richard Crooijmans; Martin Groenen; Alexander Rodionov; Elena Gaginskaya
Journal:  Genetica       Date:  2006 Sep-Nov       Impact factor: 1.082

6.  Equal frequencies of recombination nodules in both sexes of the pigeon suggest a basic difference with eutherian mammals.

Authors:  M I Pigozzi; A J Solari
Journal:  Genome       Date:  1999-04       Impact factor: 2.166

7.  Distribution of crossing over on mouse synaptonemal complexes using immunofluorescent localization of MLH1 protein.

Authors:  L K Anderson; A Reeves; L M Webb; T Ashley
Journal:  Genetics       Date:  1999-04       Impact factor: 4.562

8.  Recombination nodule mapping and chiasma distribution in spermatocytes of the pigeon, Columba livia.

Authors:  M I Pigozzi; A J Solari
Journal:  Genome       Date:  1999-04       Impact factor: 2.166

9.  Distribution of MLH1 foci on the synaptonemal complexes of chicken oocytes.

Authors:  M I Pigozzi
Journal:  Cytogenet Cell Genet       Date:  2001

10.  MLH1-focus mapping in birds shows equal recombination between sexes and diversity of crossover patterns.

Authors:  P L Calderón; M I Pigozzi
Journal:  Chromosome Res       Date:  2006-09-14       Impact factor: 4.620

View more
  27 in total

1.  On the origin and evolution of germline chromosomes in songbirds.

Authors:  Bengt Hansson
Journal:  Proc Natl Acad Sci U S A       Date:  2019-05-29       Impact factor: 11.205

2.  Gene-rich germline-restricted chromosomes in black-winged fungus gnats evolved through hybridization.

Authors:  Christina N Hodson; Kamil S Jaron; Susan Gerbi; Laura Ross
Journal:  PLoS Biol       Date:  2022-02-25       Impact factor: 8.029

3.  Germline-restricted chromosome shows remarkable variation in size among closely related passerine species.

Authors:  Manuelita Sotelo-Muñoz; Manon Poignet; Tomáš Albrecht; Ondřej Kauzál; Dmitrij Dedukh; Stephen A Schlebusch; Karel Janko; Radka Reifová
Journal:  Chromosoma       Date:  2022-04-07       Impact factor: 4.316

4.  Sex chromosome differentiation via changes in the Y chromosome repeat landscape in African annual killifishes Nothobranchius furzeri and N. kadleci.

Authors:  Jana Štundlová; Monika Hospodářská; Karolína Lukšíková; Anna Voleníková; Tomáš Pavlica; Marie Altmanová; Annekatrin Richter; Martin Reichard; Martina Dalíková; Šárka Pelikánová; Anatolie Marta; Sergey A Simanovsky; Matyáš Hiřman; Marek Jankásek; Tomáš Dvořák; Joerg Bohlen; Petr Ráb; Christoph Englert; Petr Nguyen; Alexandr Sember
Journal:  Chromosome Res       Date:  2022-10-08       Impact factor: 4.620

Review 5.  Programmed DNA Elimination in Vertebrates.

Authors:  Jeramiah J Smith; Vladimir A Timoshevskiy; Cody Saraceno
Journal:  Annu Rev Anim Biosci       Date:  2020-09-28       Impact factor: 8.923

Review 6.  Evolutionary Perspectives on Germline-Restricted Chromosomes in Flies (Diptera).

Authors:  Christina N Hodson; Laura Ross
Journal:  Genome Biol Evol       Date:  2021-06-08       Impact factor: 3.416

7.  Uniparental Genome Elimination in Australian Carp Gudgeons.

Authors:  Zuzana Majtánová; Dmitrij Dedukh; Lukáš Choleva; Mark Adams; Petr Ráb; Peter J Unmack; Tariq Ezaz
Journal:  Genome Biol Evol       Date:  2021-06-08       Impact factor: 3.416

8.  Comprehensive Chromosome End Remodeling during Programmed DNA Elimination.

Authors:  Jianbin Wang; Giovana M B Veronezi; Yuanyuan Kang; Maxim Zagoskin; Eileen T O'Toole; Richard E Davis
Journal:  Curr Biol       Date:  2020-07-16       Impact factor: 10.834

9.  A Transcriptomic Pipeline Adapted for Genomic Sequence Discovery of Germline-Restricted Sequence in Zebra Finch, Taeniopygia guttata.

Authors:  Kathryn C Asalone; Ajuni K Takkar; Colin J Saldanha; John R Bracht
Journal:  Genome Biol Evol       Date:  2021-06-08       Impact factor: 3.416

10.  New Perspectives on the Evolution of Within-Individual Genome Variation and Germline/Soma Distinction.

Authors:  Alexander Suh; Anne-Marie Dion-Côté
Journal:  Genome Biol Evol       Date:  2021-06-08       Impact factor: 3.416

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.