Literature DB >> 31034583

In silico strategies to couple production of bioethanol with growth in cyanobacteria.

Romina Lasry Testa1, Claudio Delpino1, Vanina Estrada1, Soledad M Diaz1.   

Abstract

Cyanobacteria have been considered as promising candidates for sustainable bioproduction from inexpensive raw materials, as they grow on light, carbon dioxide, and minimal inorganic nutrients. In this study, we present a genome-scale metabolic network model for Synechocystis sp. PCC 6803 and study the optimal design of the strain for ethanol production by using a mixed integer linear problem reformulation of a bilevel programming problem that identifies gene knockouts which lead to coupling between growth and product synthesis. Five mutants were found, where the in silico model predicts coupling between biomass growth and ethanol production in photoautotrophic conditions. The best mutant gives an in silico ethanol production of 1.054 mmol·gDW -1 ·h -1 .
© 2019 Wiley Periodicals, Inc.

Entities:  

Keywords:  bilevel programming; bioethanol; coupled mutant; cyanobacteria; genome-scale metabolic model; strain design

Mesh:

Substances:

Year:  2019        PMID: 31034583     DOI: 10.1002/bit.26998

Source DB:  PubMed          Journal:  Biotechnol Bioeng        ISSN: 0006-3592            Impact factor:   4.530


  5 in total

1.  Introduction of NADH-dependent nitrate assimilation in Synechococcus sp. PCC 7002 improves photosynthetic production of 2-methyl-1-butanol and isobutanol.

Authors:  Hugh M Purdy; Brian F Pfleger; Jennifer L Reed
Journal:  Metab Eng       Date:  2021-11-10       Impact factor: 8.829

2.  In Silico Design Strategies for the Production of Target Chemical Compounds Using Iterative Single-Level Linear Programming Problems.

Authors:  Tomokazu Shirai; Akihiko Kondo
Journal:  Biomolecules       Date:  2022-04-21

Review 3.  Combinatorial use of environmental stresses and genetic engineering to increase ethanol titres in cyanobacteria.

Authors:  Fraser Andrews; Matthew Faulkner; Helen S Toogood; Nigel S Scrutton
Journal:  Biotechnol Biofuels       Date:  2021-12-17       Impact factor: 6.040

Review 4.  Cyanobacteria as a Promising Alternative for Sustainable Environment: Synthesis of Biofuel and Biodegradable Plastics.

Authors:  Preeti Agarwal; Renu Soni; Pritam Kaur; Akanksha Madan; Reema Mishra; Jayati Pandey; Shreya Singh; Garvita Singh
Journal:  Front Microbiol       Date:  2022-07-13       Impact factor: 6.064

Review 5.  Genetic, Genomics, and Responses to Stresses in Cyanobacteria: Biotechnological Implications.

Authors:  Corinne Cassier-Chauvat; Victoire Blanc-Garin; Franck Chauvat
Journal:  Genes (Basel)       Date:  2021-03-29       Impact factor: 4.096

  5 in total

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