Literature DB >> 31028562

Automated diagnosis of celiac disease by video capsule endoscopy using DAISY Descriptors.

Jahmunah Vicnesh1, Joel Koh En Wei1, Edward J Ciaccio2, Shu Lih Oh1, Govind Bhagat2,3, Suzanne K Lewis2, Peter H Green2, U Rajendra Acharya4,5,6.   

Abstract

Celiac disease is a genetically determined disorder of the small intestine, occurring due to an immune response to ingested gluten-containing food. The resulting damage to the small intestinal mucosa hampers nutrient absorption, and is characterized by diarrhea, abdominal pain, and a variety of extra-intestinal manifestations. Invasive and costly methods such as endoscopic biopsy are currently used to diagnose celiac disease. Detection of the disease by histopathologic analysis of biopsies can be challenging due to suboptimal sampling. Video capsule images were obtained from celiac patients and controls for comparison and classification. This study exploits the use of DAISY descriptors to project two-dimensional images onto one-dimensional vectors. Shannon entropy is then used to extract features, after which a particle swarm optimization algorithm coupled with normalization is employed to select the 30 best features for classification. Statistical measures of this paradigm were tabulated. The accuracy, positive predictive value, sensitivity and specificity obtained in distinguishing celiac versus control video capsule images were 89.82%, 89.17%, 94.35% and 83.20% respectively, using the 10-fold cross-validation technique. When employing manual methods rather than the automated means described in this study, technical limitations and inconclusive results may hamper diagnosis. Our findings suggest that the computer-aided detection system presented herein can render diagnostic information, and thus may provide clinicians with an important tool to validate a diagnosis of celiac disease.

Entities:  

Keywords:  Celiac disease; Daisy descriptors, PillCam; Normalization; Particle swarm optimization; Shannon entropy

Year:  2019        PMID: 31028562     DOI: 10.1007/s10916-019-1285-6

Source DB:  PubMed          Journal:  J Med Syst        ISSN: 0148-5598            Impact factor:   4.460


  19 in total

Review 1.  The histopathology of coeliac disease: time for a standardized report scheme for pathologists.

Authors:  G Oberhuber; G Granditsch; H Vogelsang
Journal:  Eur J Gastroenterol Hepatol       Date:  1999-10       Impact factor: 2.566

2.  DAISY: an efficient dense descriptor applied to wide-baseline stereo.

Authors:  Engin Tola; Vincent Lepetit; Pascal Fua
Journal:  IEEE Trans Pattern Anal Mach Intell       Date:  2010-05       Impact factor: 6.226

3.  Automated classification of duodenal imagery in celiac disease using evolved Fourier feature vectors.

Authors:  Andreas Vécsei; Thomas Fuhrmann; Michael Liedlgruber; Leonhard Brunauer; Hannes Payer; Andreas Uhl
Journal:  Comput Methods Programs Biomed       Date:  2009-04-08       Impact factor: 5.428

Review 4.  Deep learning for healthcare applications based on physiological signals: A review.

Authors:  Oliver Faust; Yuki Hagiwara; Tan Jen Hong; Oh Shu Lih; U Rajendra Acharya
Journal:  Comput Methods Programs Biomed       Date:  2018-04-11       Impact factor: 5.428

Review 5.  Deep learning.

Authors:  Yann LeCun; Yoshua Bengio; Geoffrey Hinton
Journal:  Nature       Date:  2015-05-28       Impact factor: 49.962

Review 6.  Coeliac disease and the videocapsule: what have we learned till now.

Authors:  Edward J Ciaccio; Suzanne K Lewis; Govind Bhagat; Peter H Green
Journal:  Ann Transl Med       Date:  2017-05

7.  Quantitative analysis of patients with celiac disease by video capsule endoscopy: A deep learning method.

Authors:  Teng Zhou; Guoqiang Han; Bing Nan Li; Zhizhe Lin; Edward J Ciaccio; Peter H Green; Jing Qin
Journal:  Comput Biol Med       Date:  2017-04-08       Impact factor: 4.589

8.  Automated identification of normal and diabetes heart rate signals using nonlinear measures.

Authors:  U Rajendra Acharya; Oliver Faust; Nahrizul Adib Kadri; Jasjit S Suri; Wenwei Yu
Journal:  Comput Biol Med       Date:  2013-06-06       Impact factor: 4.589

9.  Robust spectral analysis of videocapsule images acquired from celiac disease patients.

Authors:  Edward J Ciaccio; Christina A Tennyson; Govind Bhagat; Suzanne K Lewis; Peter H R Green
Journal:  Biomed Eng Online       Date:  2011-09-09       Impact factor: 2.819

Review 10.  Deep Learning in Medical Imaging: General Overview.

Authors:  June-Goo Lee; Sanghoon Jun; Young-Won Cho; Hyunna Lee; Guk Bae Kim; Joon Beom Seo; Namkug Kim
Journal:  Korean J Radiol       Date:  2017-05-19       Impact factor: 3.500

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  3 in total

Review 1.  Recent developments in small bowel endoscopy: the "black box" is now open!

Authors:  Luigina Vanessa Alemanni; Stefano Fabbri; Emanuele Rondonotti; Alessandro Mussetto
Journal:  Clin Endosc       Date:  2022-07-14

Review 2.  Artificial intelligence in small intestinal diseases: Application and prospects.

Authors:  Yu Yang; Yu-Xuan Li; Ren-Qi Yao; Xiao-Hui Du; Chao Ren
Journal:  World J Gastroenterol       Date:  2021-07-07       Impact factor: 5.742

Review 3.  An updated overview of spectrum of gluten-related disorders: clinical and diagnostic aspects.

Authors:  Nazanin Taraghikhah; Sara Ashtari; Nastaran Asri; Bijan Shahbazkhani; David Al-Dulaimi; Mohammad Rostami-Nejad; Mostafa Rezaei-Tavirani; Mohammad Reza Razzaghi; Mohammad Reza Zali
Journal:  BMC Gastroenterol       Date:  2020-08-06       Impact factor: 3.067

  3 in total

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