| Literature DB >> 31022553 |
Guoyou Liu1, Ann Dean2.
Abstract
The eukaryotic genome is organized at varying levels into chromosome territories, transcriptional compartments and topologically associating domains (TADs), which are architectural features largely shared between different cell types and across species. In contrast, within TADs, chromatin loops connect enhancers and their target genes to establish unique transcriptomes that distinguish cells and tissues from each other and underlie development and differentiation. How these tissue-specific and temporal stage-specific long-range contacts are formed and maintained is a fundamental question in biology. The widely expressed Lim domain binding 1 protein, LDB1, plays a critical role in connecting enhancers and genes by forming complexes with cell-type specificity across diverse developmental pathways including neurogenesis, cardiogenesis, retinogenesis and hematopoiesis. Here we review the multiple roles of LDB1 in cell fate determination and in chromatin loop formation, with an emphasis on mammalian systems, to illuminate how LDB1 functions in normal cells and in diseases such as cancer. Published by Elsevier B.V.Entities:
Keywords: Chromatin; Development; Enhancers; Gene expression; LDB1; LIM proteins; Looping
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Year: 2019 PMID: 31022553 DOI: 10.1016/j.bbagrm.2019.04.003
Source DB: PubMed Journal: Biochim Biophys Acta Gene Regul Mech ISSN: 1874-9399 Impact factor: 4.490