| Literature DB >> 31013964 |
Katerina D Tzimourta1, Nikolaos Giannakeas2, Alexandros T Tzallas3, Loukas G Astrakas4, Theodora Afrantou5, Panagiotis Ioannidis6, Nikolaos Grigoriadis7, Pantelis Angelidis8, Dimitrios G Tsalikakis9, Markos G Tsipouras10.
Abstract
Alzheimer's Disease (AD) is a neurogenerative disorder and the most common type of dementia with a rapidly increasing world prevalence. In this paper, the ability of several statistical and spectral features to detect AD from electroencephalographic (EEG) recordings is evaluated. For this purpose, clinical EEG recordings from 14 patients with AD (8 with mild AD and 6 with moderate AD) and 10 healthy, age-matched individuals are analyzed. The EEG signals are initially segmented in nonoverlapping epochs of different lengths ranging from 5 s to 12 s. Then, a group of statistical and spectral features calculated for each EEG rhythm (δ, θ, α, β, and γ) are extracted, forming the feature vector that trained and tested a Random Forests classifier. Six classification problems are addressed, including the discrimination from whole-brain dynamics and separately from specific brain regions in order to highlight any alterations of the cortical regions. The results indicated a high accuracy ranging from 88.79% to 96.78% for whole-brain classification. Also, the classification accuracy was higher at the posterior and central regions than at the frontal area and the right side of temporal lobe for all classification problems.Entities:
Keywords: Alzheimer’s Disease; EEG; Random Forests; classification; dementia; detection; mild; moderate; window length
Year: 2019 PMID: 31013964 PMCID: PMC6523667 DOI: 10.3390/brainsci9040081
Source DB: PubMed Journal: Brain Sci ISSN: 2076-3425
The descriptions of participants’ characteristics.
| Moderate AD | Mild AD | Controls | |
|---|---|---|---|
| Age | 62.5 (61.25–68.25) | 73.5 (68.5–77.25) | 67 (62.25–72) |
| Gender (m:f) | 3:3 | 3:5 | 7:3 |
| Education level (P:S:H) | 3:3 | 4:2:2 | 3:3:4 |
| MMSE | 15 (14–16) | 21 (20–22) | 30 |
| Disease duration (months) | 32 (24–36) | 22 (19.5–24) | - |
* m: male, f: female, P: primary education (6 years), S: secondary education (12 years), H: higher education (>12 years).
Figure 1A segment of 3 s extracted from a 12-s epoch of O1 of three different subjects (control, mild Alzheimer’s Disease (AD) patient, and moderate AD patient).
The classification performance of MultiLayer Perceptron (MLP), k-Nearest Neighbor (KNN), Support Vector Machines (SVM), Naïve Bayes (NB), and Decision Trees (DT) for 12-s epochs in terms of accuracy.
| Classification Problem | MLP | KNN | SVM | NB | DT | RF |
|---|---|---|---|---|---|---|
| CN/AD | 86.11 | 80.98 | 77.23 | 66.20 | 83.29 |
|
| CN/mild | 89.02 | 85.16 | 77.11 | 54.80 | 85.76 |
|
| CN/moderate | 95.23 | 93.62 | 91.09 | 81.93 | 94.48 |
|
| CN-mild/moderate | 94.20 | 91.39 | 88.86 | 80.05 | 92.15 |
|
| mild/moderate | 90.17 | 87.48 | 79.15 | 70.03 | 86.30 |
|
| CN/mild/moderate | 80.71 | 74.88 | 66.59 | 46.74 | 77.55 |
|
The classification results in terms of the Accuracy (ACC) for each classification problem for 8 window lengths.
| Classification Problem | 5 s | 6 s | 7 s | 8 s | 9 s | 10 s | 11 s | 12 s |
|---|---|---|---|---|---|---|---|---|
| CN/AD | 86.98 | 88.04 | 89.15 | 89.93 | 90.37 | 91.09 | 91.66 |
|
| CN/mild | 86.60 | 87.65 | 88.81 | 89.50 | 90.09 | 90.81 | 91.43 |
|
| CN/moderate | 94.68 | 95.13 | 95.64 | 95.99 | 96.18 | 96.46 | 96.56 |
|
| CN-mild/moderate | 92.59 | 93.27 | 93.78 | 94.06 | 94.29 | 94.70 | 94.88 |
|
| mild/moderate | 87.63 | 88.70 | 89.52 | 90.25 | 90.69 | 91.19 | 91.38 |
|
| CN/mild/moderate | 82.34 | 83.73 | 85.23 | 86.10 | 86.93 | 87.72 | 88.47 |
|
Figure 2The results in terms of the classification accuracy for the six classification problems over 8 window lengths. (blue: CN/AD, yellow: CN/mild, green: CN/moderate, red: CN-mild/moderate, purple: mild/moderate, grey: CN/mild/moderate).
The classification results in terms of the Accuracy (ACC), Precision, F1-Score, and Kappa Statistics for a 12-s window length.
| Classification Problem | ACC (%) | Precision (%) | F1-score | Kappa |
|---|---|---|---|---|
| CN/AD | 91.80 | 93.35 | 0.9077 | 0.8340 |
| CN/mild | 91.77 | 93.11 | 0.8739 | 0.8132 |
| CN/moderate | 96.76 | 97.78 | 0.9277 | 0.9069 |
| CN-mild/moderate | 94.99 | 92.24 | 0.8372 | 0.8079 |
| mild/moderate | 91.71 | 91.42 | 0.8837 | 0.8194 |
| CN/mild/moderate | 88.79 | 88.83 | 0.8474 | 0.8860 |
CN: Controls, AD: Alzheimer’s Disease.
The classification results in terms of the Accuracy (ACC), Precision, F1-score, and Kappa statistics for the anterior (Fp1, F3, Fz, Fp2, and F4), central (C3, Cz, and C4), left/temporal (F7, T3, and T5), right/temporal (F8, T4, and T6), and posterior (O1, O2, P3, Pz, and P4) clusters. For the analysis, the electroencephalographic (EEG) signals were segmented in epochs of 12 nonoverlapping seconds.
| Classification Problem | ACC (%) | Precision (%) | F1-score | Kappa | |
|---|---|---|---|---|---|
|
| CN/AD | 91.53 | 90.32 | 0.9244 | 0.8283 |
| CN/mild | 90.84 | 92.47 | 0.8561 | 0.7894 | |
| CN/moderate | 96.39 | 97.70 | 0.9188 | 0.8957 | |
| CN-mild/moderate | 94.37 | 90.78 | 0.8161 | 0.7833 | |
| mild/moderate | 90.03 | 89.48 | 0.8610 | 0.7835 | |
| CN/mild/moderate | 87.67 | 87.31 | 0.8041 | 0.7861 | |
|
| CN/AD | 94.76 | 94.00 | 0.9534 | 0.8936 |
| CN/mild | 94.87 | 96.44 | 0.9179 | 0.8807 | |
| CN/moderate | 97.51 | 97.68 | 0.9469 | 0.9307 | |
| CN-mild/moderate | 97.19 | 96.40 | 0.9163 | 0.8796 | |
| mild/moderate | 96.24 | 96.44 | 0.9518 | 0.9210 | |
| CN/mild/moderate | 93.80 | 94.43 | 0.9051 | 0.8930 | |
|
| CN/AD | 92.45 | 91.98 | 0.9337 | 0.8462 |
| CN/mild | 92.18 | 91.53 | 0.8754 | 0.8186 | |
| CN/moderate | 97.05 | 99.11 | 0.9319 | 0.9131 | |
| CN-mild/moderate | 95.71 | 94.49 | 0.8599 | 0.8348 | |
| mild/moderate | 94.28 | 93.78 | 0.9234 | 0.8778 | |
| CN/mild/moderate | 90.49 | 90.73 | 0.8528 | 0.8339 | |
|
| CN/AD | 90.99 | 88.94 | 0.9148 | 0.8194 |
| CN/mild | 91.02 | 92.12 | 0.8769 | 0.8065 | |
| CN/moderate | 96.40 | 97.95 | 0.9232 | 0.8997 | |
| CN-mild/moderate | 95.23 | 94.80 | 0.8434 | 0.8156 | |
| mild/moderate | 92.57 | 92.93 | 0.8884 | 0.8329 | |
| CN/mild/moderate | 88.78 | 89.83 | 0.8488 | 0.8112 | |
|
| CN/AD | 94.17 | 93.90 | 0.9468 | 0.8823 |
| CN/mild | 93.55 | 93.25 | 0.9055 | 0.8566 | |
| CN/moderate | 97.72 | 98.04 | 0.9485 | 0.9338 | |
| CN-mild/moderate | 96.95 | 94.20 | 0.9425 | 0.8492 | |
| mild/moderate | 94.66 | 93.29 | 0.9239 | 0.8828 | |
| CN/mild/moderate | 91.80 | 91.57 | 0.8981 | 0.8600 |
Figure 3Boxplot of the accuracy results from all electrode clusters for each classification problem: The abbreviation CN stands for Controls and AD stands for Alzheimer’s Disease.
Figure 4The distribution of the accuracy results in each cluster for the 5 classification problems: The abbreviation CN stands for Controls and AD stands for Alzheimer’s Disease.
A comparison of the performances of the various methods proposed in the literature related to Alzheimer’s Disease.
| Authors | No. of Subjects | Window Length | MMSE Range | Method | Classification Problem | ACC |
|---|---|---|---|---|---|---|
| Falk et al. [ | 11 CN/11 mild/10 moderate | 5 s | CN: 26.6 ± 2.7 | HHT, Amplitude modulation analysis, SVM | CN/AD | 90.60% |
| Deng et al. [ | 14 CN/14 AD | 8 s | CN: 28–30 | Multivariate Multiscale Weighted Permutation Entropy, ROC analysis | CN/AD | 96.70% |
| Kulkarni et al. [ | 50 CN/50 AD | ~5 s | Spectral entropy, Spectral centroid, Spectral roll-off, Zero Crossing Rate, SVM | CN/AD | 96.00% | |
| Chen et al. [ | 15 CN/15 AD | 8 s | CN: 28.1–30 | Detrended Fluctuation Analysis, Cross-correlation coefficient, LDA | CN/AD | 90.00% (only C3–P3) |
| Song et al. [ | 15 CN/15 AD | 8 s | CN: 27.1 ± 1.3 | Brain Functional Connectivity Analysis, weighted-permutation entropy, KNN | CN/AD | 96.63% |
| Simons and Abasolo [ | 11 CN/11 AD | 5 s | CN: 30 | Distance-based Lempel Ziv Complexity | CN/AD | 78.25% (only O1–O2) |
| This study | 10 CN/14 AD | 12 s | CN: 30 | moments, STD, IQR, Energy, RBP, ShanEN, ApEN, TsalEN, PermEN, MSE, SamplEN, Random Forests | CN/AD | 91.80% |
CN: Controls, AD: Alzheimer’s Disease, mod: moderate AD, HHT: Hilbert–Huang Transform, SVM: Support Vector Machines, LDA: Linear Discriminant Analysis, KNN: k-Nearest Neighbor, STD: Standard Deviation, IQR: Interquartile range, RBP: Relative Band Power, ShanEn: Shannon Entropy, ApEN: Approximate Entropy, TsalEN: Tsallis Entropy, PermEn: Permutation Entropy, MSEL Multiscale Entropy, SamplEN: Sample Entropy.