Literature DB >> 31013546

Performance of revised STO(1M)-3G basis set for prediction of 5-fluorocytosine chemical shifts.

Teobald Kupka1, Adrianna Mnich1, Małgorzata A Broda1.   

Abstract

Nuclear shieldings and chemical shifts of 5-fluorocytosine (5FC) were predicted in the gas phase and DMSO solution modeled by polarizable continuum model using B3LYP density functional and revised STO(1M)-3G basis set. For comparison, eight arbitrary selected basis sets including STO-3G and medium-size Pople-type and larger dedicated Jensen-type ones were applied. The former basis sets were significantly smaller, but the calculated structural parameters, harmonic vibrational frequencies, were very accurate and close to those obtained with larger, polarization-consistent ones. The predicted 13 C and 1 H chemical shieldings of 5FC and cytosine, selected as parent molecule, were acceptable (root mean square for 13 C chemical shifts in DMSO of about 5 ppm and less) though less accurate than those calculated with large basis sets, dedicated for prediction of nuclear magnetic resonance parameters.
© 2019 John Wiley & Sons, Ltd.

Entities:  

Keywords:  5-fluorocytosine; 5FC; GIAO NMR; STO(1M)-3G; modified basis sets

Year:  2019        PMID: 31013546     DOI: 10.1002/mrc.4879

Source DB:  PubMed          Journal:  Magn Reson Chem        ISSN: 0749-1581            Impact factor:   2.447


  1 in total

1.  Factors Governing the Chemical Stability and NMR Parameters of Uracil Tautomers and Its 5-Halogen Derivatives.

Authors:  Kacper Rzepiela; Aneta Buczek; Teobald Kupka; Małgorzata A Broda
Journal:  Molecules       Date:  2020-08-28       Impact factor: 4.411

  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.